Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.29■■□□□ 1.64
TMEFF1Q8IYR6 RARRES2P1-201ENST00000474487 481 ntBASIC25.29■■□□□ 1.64
TMEFF1Q8IYR6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.29■■□□□ 1.64
TMEFF1Q8IYR6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TMEFF1Q8IYR6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TMEFF1Q8IYR6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TMEFF1Q8IYR6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.27■■□□□ 1.64
TMEFF1Q8IYR6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TMEFF1Q8IYR6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TMEFF1Q8IYR6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.27■■□□□ 1.64
TMEFF1Q8IYR6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.27■■□□□ 1.64
TMEFF1Q8IYR6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMEFF1Q8IYR6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.26■■□□□ 1.63
TMEFF1Q8IYR6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMEFF1Q8IYR6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TMEFF1Q8IYR6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.26■■□□□ 1.63
TMEFF1Q8IYR6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.26■■□□□ 1.63
TMEFF1Q8IYR6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.25■■□□□ 1.63
TMEFF1Q8IYR6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TMEFF1Q8IYR6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.24■■□□□ 1.63
TMEFF1Q8IYR6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TMEFF1Q8IYR6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TMEFF1Q8IYR6 AL157400.5-201ENST00000507624 621 ntBASIC25.24■■□□□ 1.63
TMEFF1Q8IYR6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TMEFF1Q8IYR6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TMEFF1Q8IYR6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TMEFF1Q8IYR6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TMEFF1Q8IYR6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.21■■□□□ 1.63
TMEFF1Q8IYR6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
TMEFF1Q8IYR6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
TMEFF1Q8IYR6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.2■■□□□ 1.62
TMEFF1Q8IYR6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
TMEFF1Q8IYR6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TMEFF1Q8IYR6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.19■■□□□ 1.62
TMEFF1Q8IYR6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.19■■□□□ 1.62
TMEFF1Q8IYR6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMEFF1Q8IYR6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.19■■□□□ 1.62
TMEFF1Q8IYR6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TMEFF1Q8IYR6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.19■■□□□ 1.62
TMEFF1Q8IYR6 DUX4L18-201ENST00000553347 1267 ntBASIC25.19■■□□□ 1.62
TMEFF1Q8IYR6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMEFF1Q8IYR6 AC007029.1-201ENST00000604183 313 ntBASIC25.18■■□□□ 1.62
TMEFF1Q8IYR6 AC129492.7-201ENST00000622992 756 ntBASIC25.18■■□□□ 1.62
TMEFF1Q8IYR6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMEFF1Q8IYR6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMEFF1Q8IYR6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.17■■□□□ 1.62
TMEFF1Q8IYR6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
TMEFF1Q8IYR6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
TMEFF1Q8IYR6 AL592293.1-201ENST00000502889 1188 ntBASIC25.16■■□□□ 1.62
TMEFF1Q8IYR6 AC133552.2-201ENST00000619106 1032 ntBASIC25.16■■□□□ 1.62
TMEFF1Q8IYR6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMEFF1Q8IYR6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
TMEFF1Q8IYR6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
TMEFF1Q8IYR6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.15■■□□□ 1.62
TMEFF1Q8IYR6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.15■■□□□ 1.62
TMEFF1Q8IYR6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
TMEFF1Q8IYR6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TMEFF1Q8IYR6 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.14■■□□□ 1.62
TMEFF1Q8IYR6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.14■■□□□ 1.62
TMEFF1Q8IYR6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
TMEFF1Q8IYR6 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.14■■□□□ 1.62
TMEFF1Q8IYR6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TMEFF1Q8IYR6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.14■■□□□ 1.62
TMEFF1Q8IYR6 AC009831.1-201ENST00000580420 1582 ntBASIC25.14■■□□□ 1.61
TMEFF1Q8IYR6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
TMEFF1Q8IYR6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.13■■□□□ 1.61
TMEFF1Q8IYR6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.13■■□□□ 1.61
TMEFF1Q8IYR6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TMEFF1Q8IYR6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.12■■□□□ 1.61
TMEFF1Q8IYR6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TMEFF1Q8IYR6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.11■■□□□ 1.61
TMEFF1Q8IYR6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TMEFF1Q8IYR6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TMEFF1Q8IYR6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
TMEFF1Q8IYR6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.1■■□□□ 1.61
TMEFF1Q8IYR6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TMEFF1Q8IYR6 SMPD5-203ENST00000639008 1464 ntBASIC25.09■■□□□ 1.61
TMEFF1Q8IYR6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TMEFF1Q8IYR6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.09■■□□□ 1.61
TMEFF1Q8IYR6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TMEFF1Q8IYR6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.09■■□□□ 1.61
TMEFF1Q8IYR6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
TMEFF1Q8IYR6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TMEFF1Q8IYR6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
TMEFF1Q8IYR6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TMEFF1Q8IYR6 AL359258.2-201ENST00000564063 1566 ntBASIC25.07■■□□□ 1.6
TMEFF1Q8IYR6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TMEFF1Q8IYR6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TMEFF1Q8IYR6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.07■■□□□ 1.6
TMEFF1Q8IYR6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
TMEFF1Q8IYR6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TMEFF1Q8IYR6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TMEFF1Q8IYR6 AC100797.4-201ENST00000631653 1827 ntBASIC25.06■■□□□ 1.6
TMEFF1Q8IYR6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMEFF1Q8IYR6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
TMEFF1Q8IYR6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.05■■□□□ 1.6
TMEFF1Q8IYR6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TMEFF1Q8IYR6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TMEFF1Q8IYR6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TMEFF1Q8IYR6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms