Protein–RNA interactions for Protein: Q8IXR9

C12orf56, Uncharacterized protein C12orf56, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56Q8IXR9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.56■■■□□ 2
C12orf56Q8IXR9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.56■■■□□ 2
C12orf56Q8IXR9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.56■■■□□ 2
C12orf56Q8IXR9 CR559946.2-201ENST00000623684 991 ntBASIC27.56■■■□□ 2
C12orf56Q8IXR9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
C12orf56Q8IXR9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.56■■■□□ 2
C12orf56Q8IXR9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
C12orf56Q8IXR9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
C12orf56Q8IXR9 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.54■■■□□ 2
C12orf56Q8IXR9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC27.54■■■□□ 2
C12orf56Q8IXR9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.52■■■□□ 2
C12orf56Q8IXR9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.52■■■□□ 2
C12orf56Q8IXR9 MIR7108-201ENST00000614319 87 ntBASIC27.52■■■□□ 2
C12orf56Q8IXR9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
C12orf56Q8IXR9 MIR3648-2-201ENST00000581792 180 ntBASIC27.51■■□□□ 1.99
C12orf56Q8IXR9 MIR3648-1-201ENST00000615959 180 ntBASIC27.51■■□□□ 1.99
C12orf56Q8IXR9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
C12orf56Q8IXR9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
C12orf56Q8IXR9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
C12orf56Q8IXR9 AC008813.1-201ENST00000536597 885 ntBASIC27.49■■□□□ 1.99
C12orf56Q8IXR9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.49■■□□□ 1.99
C12orf56Q8IXR9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
C12orf56Q8IXR9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
C12orf56Q8IXR9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
C12orf56Q8IXR9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
C12orf56Q8IXR9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
C12orf56Q8IXR9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
C12orf56Q8IXR9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
C12orf56Q8IXR9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
C12orf56Q8IXR9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.46■■□□□ 1.99
C12orf56Q8IXR9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
C12orf56Q8IXR9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.99
C12orf56Q8IXR9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
C12orf56Q8IXR9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
C12orf56Q8IXR9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
C12orf56Q8IXR9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
C12orf56Q8IXR9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
C12orf56Q8IXR9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
C12orf56Q8IXR9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.44■■□□□ 1.98
C12orf56Q8IXR9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
C12orf56Q8IXR9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
C12orf56Q8IXR9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.43■■□□□ 1.98
C12orf56Q8IXR9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
C12orf56Q8IXR9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
C12orf56Q8IXR9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
C12orf56Q8IXR9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
C12orf56Q8IXR9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
C12orf56Q8IXR9 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
C12orf56Q8IXR9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
C12orf56Q8IXR9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
C12orf56Q8IXR9 AC016575.1-201ENST00000607026 382 ntBASIC27.41■■□□□ 1.98
C12orf56Q8IXR9 AC148477.6-201ENST00000623746 465 ntBASIC27.41■■□□□ 1.98
C12orf56Q8IXR9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
C12orf56Q8IXR9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.4■■□□□ 1.98
C12orf56Q8IXR9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.4■■□□□ 1.98
C12orf56Q8IXR9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
C12orf56Q8IXR9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
C12orf56Q8IXR9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
C12orf56Q8IXR9 HLA-V-202ENST00000446817 847 ntBASIC27.37■■□□□ 1.97
C12orf56Q8IXR9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC27.37■■□□□ 1.97
C12orf56Q8IXR9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
C12orf56Q8IXR9 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
C12orf56Q8IXR9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
C12orf56Q8IXR9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC27.36■■□□□ 1.97
C12orf56Q8IXR9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
C12orf56Q8IXR9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
C12orf56Q8IXR9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
C12orf56Q8IXR9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.35■■□□□ 1.97
C12orf56Q8IXR9 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
C12orf56Q8IXR9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
C12orf56Q8IXR9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.34■■□□□ 1.97
C12orf56Q8IXR9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC27.34■■□□□ 1.97
C12orf56Q8IXR9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.34■■□□□ 1.97
C12orf56Q8IXR9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
C12orf56Q8IXR9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
C12orf56Q8IXR9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
C12orf56Q8IXR9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
C12orf56Q8IXR9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
C12orf56Q8IXR9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC27.33■■□□□ 1.97
C12orf56Q8IXR9 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
C12orf56Q8IXR9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
C12orf56Q8IXR9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.96
C12orf56Q8IXR9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
C12orf56Q8IXR9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.32■■□□□ 1.96
C12orf56Q8IXR9 MIR219A2-201ENST00000608502 1504 ntBASIC27.31■■□□□ 1.96
C12orf56Q8IXR9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
C12orf56Q8IXR9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
C12orf56Q8IXR9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
C12orf56Q8IXR9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC27.31■■□□□ 1.96
C12orf56Q8IXR9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
C12orf56Q8IXR9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.3■■□□□ 1.96
C12orf56Q8IXR9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.3■■□□□ 1.96
C12orf56Q8IXR9 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.3■■□□□ 1.96
C12orf56Q8IXR9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
C12orf56Q8IXR9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
C12orf56Q8IXR9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
C12orf56Q8IXR9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
C12orf56Q8IXR9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
C12orf56Q8IXR9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
C12orf56Q8IXR9 MIR639-201ENST00000384974 98 ntBASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms