Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.21■■□□□ 1.15
LRRC28Q86X40 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.21■■□□□ 1.15
LRRC28Q86X40 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
LRRC28Q86X40 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LRRC28Q86X40 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LRRC28Q86X40 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.2■■□□□ 1.14
LRRC28Q86X40 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LRRC28Q86X40 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
LRRC28Q86X40 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.19■■□□□ 1.14
LRRC28Q86X40 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.18■■□□□ 1.14
LRRC28Q86X40 AC091060.1-201ENST00000623524 1766 ntBASIC22.18■■□□□ 1.14
LRRC28Q86X40 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
LRRC28Q86X40 AC108673.1-201ENST00000510422 1159 ntBASIC22.18■■□□□ 1.14
LRRC28Q86X40 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.18■■□□□ 1.14
LRRC28Q86X40 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRRC28Q86X40 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.17■■□□□ 1.14
LRRC28Q86X40 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LRRC28Q86X40 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.16■■□□□ 1.14
LRRC28Q86X40 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LRRC28Q86X40 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.16■■□□□ 1.14
LRRC28Q86X40 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRC28Q86X40 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LRRC28Q86X40 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
LRRC28Q86X40 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRC28Q86X40 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
LRRC28Q86X40 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRC28Q86X40 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
LRRC28Q86X40 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.14■■□□□ 1.13
LRRC28Q86X40 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
LRRC28Q86X40 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRRC28Q86X40 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRRC28Q86X40 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRRC28Q86X40 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
LRRC28Q86X40 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRRC28Q86X40 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
LRRC28Q86X40 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
LRRC28Q86X40 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.13■■□□□ 1.13
LRRC28Q86X40 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRRC28Q86X40 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LRRC28Q86X40 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
LRRC28Q86X40 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRRC28Q86X40 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRRC28Q86X40 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
LRRC28Q86X40 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.11■■□□□ 1.13
LRRC28Q86X40 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRRC28Q86X40 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.11■■□□□ 1.13
LRRC28Q86X40 MIR6090-201ENST00000622481 60 ntBASIC22.11■■□□□ 1.13
LRRC28Q86X40 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRRC28Q86X40 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.11■■□□□ 1.13
LRRC28Q86X40 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRRC28Q86X40 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRRC28Q86X40 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRRC28Q86X40 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LRRC28Q86X40 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRRC28Q86X40 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
LRRC28Q86X40 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
LRRC28Q86X40 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.1■■□□□ 1.13
LRRC28Q86X40 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
LRRC28Q86X40 ABHD17AP4-201ENST00000411545 909 ntBASIC22.09■■□□□ 1.13
LRRC28Q86X40 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.09■■□□□ 1.13
LRRC28Q86X40 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRRC28Q86X40 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRRC28Q86X40 AC020928.2-201ENST00000588717 2197 ntBASIC22.09■■□□□ 1.13
LRRC28Q86X40 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.08■■□□□ 1.13
LRRC28Q86X40 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
LRRC28Q86X40 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
LRRC28Q86X40 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.07■■□□□ 1.12
LRRC28Q86X40 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.07■■□□□ 1.12
LRRC28Q86X40 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
LRRC28Q86X40 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
LRRC28Q86X40 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRRC28Q86X40 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRRC28Q86X40 AC145676.1-201ENST00000514988 2004 ntBASIC22.06■■□□□ 1.12
LRRC28Q86X40 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
LRRC28Q86X40 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRRC28Q86X40 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.06■■□□□ 1.12
LRRC28Q86X40 DUX4L29-201ENST00000425409 679 ntBASIC22.06■■□□□ 1.12
LRRC28Q86X40 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.06■■□□□ 1.12
LRRC28Q86X40 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.06■■□□□ 1.12
LRRC28Q86X40 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.05■■□□□ 1.12
LRRC28Q86X40 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRRC28Q86X40 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRRC28Q86X40 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRRC28Q86X40 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.05■■□□□ 1.12
LRRC28Q86X40 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
LRRC28Q86X40 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
LRRC28Q86X40 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LRRC28Q86X40 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.04■■□□□ 1.12
LRRC28Q86X40 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.04■■□□□ 1.12
LRRC28Q86X40 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.04■■□□□ 1.12
LRRC28Q86X40 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRRC28Q86X40 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.02■■□□□ 1.12
LRRC28Q86X40 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRRC28Q86X40 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.02■■□□□ 1.12
LRRC28Q86X40 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRRC28Q86X40 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.01■■□□□ 1.11
LRRC28Q86X40 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRRC28Q86X40 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.01■■□□□ 1.11
LRRC28Q86X40 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.01■■□□□ 1.11
LRRC28Q86X40 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms