Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LRRTM4Q86VH4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
LRRTM4Q86VH4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LRRTM4Q86VH4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LRRTM4Q86VH4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LRRTM4Q86VH4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
LRRTM4Q86VH4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
LRRTM4Q86VH4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
LRRTM4Q86VH4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LRRTM4Q86VH4 MIR219A2-201ENST00000608502 1504 ntBASIC24.82■■□□□ 1.56
LRRTM4Q86VH4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
LRRTM4Q86VH4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LRRTM4Q86VH4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
LRRTM4Q86VH4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LRRTM4Q86VH4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
LRRTM4Q86VH4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
LRRTM4Q86VH4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.81■■□□□ 1.56
LRRTM4Q86VH4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
LRRTM4Q86VH4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LRRTM4Q86VH4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
LRRTM4Q86VH4 DRD5P2-201ENST00000421395 2012 ntBASIC24.8■■□□□ 1.56
LRRTM4Q86VH4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.8■■□□□ 1.56
LRRTM4Q86VH4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
LRRTM4Q86VH4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRRTM4Q86VH4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRRTM4Q86VH4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.79■■□□□ 1.56
LRRTM4Q86VH4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.79■■□□□ 1.56
LRRTM4Q86VH4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.79■■□□□ 1.56
LRRTM4Q86VH4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
LRRTM4Q86VH4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.79■■□□□ 1.56
LRRTM4Q86VH4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRRTM4Q86VH4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.78■■□□□ 1.56
LRRTM4Q86VH4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
LRRTM4Q86VH4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.78■■□□□ 1.56
LRRTM4Q86VH4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
LRRTM4Q86VH4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
LRRTM4Q86VH4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
LRRTM4Q86VH4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
LRRTM4Q86VH4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
LRRTM4Q86VH4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
LRRTM4Q86VH4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.77■■□□□ 1.56
LRRTM4Q86VH4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.76■■□□□ 1.55
LRRTM4Q86VH4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
LRRTM4Q86VH4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
LRRTM4Q86VH4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
LRRTM4Q86VH4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.75■■□□□ 1.55
LRRTM4Q86VH4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
LRRTM4Q86VH4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
LRRTM4Q86VH4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
LRRTM4Q86VH4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
LRRTM4Q86VH4 AC018358.1-201ENST00000631079 1402 ntBASIC24.74■■□□□ 1.55
LRRTM4Q86VH4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
LRRTM4Q86VH4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.73■■□□□ 1.55
LRRTM4Q86VH4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
LRRTM4Q86VH4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
LRRTM4Q86VH4 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.73■■□□□ 1.55
LRRTM4Q86VH4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
LRRTM4Q86VH4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
LRRTM4Q86VH4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LRRTM4Q86VH4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
LRRTM4Q86VH4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LRRTM4Q86VH4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
LRRTM4Q86VH4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
LRRTM4Q86VH4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
LRRTM4Q86VH4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.7■■□□□ 1.54
LRRTM4Q86VH4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
LRRTM4Q86VH4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.7■■□□□ 1.54
LRRTM4Q86VH4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LRRTM4Q86VH4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
LRRTM4Q86VH4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LRRTM4Q86VH4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
LRRTM4Q86VH4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
LRRTM4Q86VH4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.68■■□□□ 1.54
LRRTM4Q86VH4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.68■■□□□ 1.54
LRRTM4Q86VH4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
LRRTM4Q86VH4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LRRTM4Q86VH4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
LRRTM4Q86VH4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.66■■□□□ 1.54
LRRTM4Q86VH4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.66■■□□□ 1.54
LRRTM4Q86VH4 HSD17B1P1-201ENST00000590052 955 ntBASIC24.66■■□□□ 1.54
LRRTM4Q86VH4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
LRRTM4Q86VH4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
LRRTM4Q86VH4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LRRTM4Q86VH4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
LRRTM4Q86VH4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
LRRTM4Q86VH4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.65■■□□□ 1.54
LRRTM4Q86VH4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
LRRTM4Q86VH4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.54
LRRTM4Q86VH4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
LRRTM4Q86VH4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
LRRTM4Q86VH4 AC022413.1-201ENST00000624602 984 ntBASIC24.64■■□□□ 1.54
LRRTM4Q86VH4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LRRTM4Q86VH4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
LRRTM4Q86VH4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LRRTM4Q86VH4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
LRRTM4Q86VH4 GPX1-201ENST00000419349 1106 ntBASIC24.63■■□□□ 1.53
LRRTM4Q86VH4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.63■■□□□ 1.53
LRRTM4Q86VH4 AC126177.7-201ENST00000547904 679 ntBASIC24.63■■□□□ 1.53
LRRTM4Q86VH4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.63■■□□□ 1.53
LRRTM4Q86VH4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms