Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
NIPAL1Q6NVV3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
NIPAL1Q6NVV3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.08■■□□□ 1.45
NIPAL1Q6NVV3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
NIPAL1Q6NVV3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
NIPAL1Q6NVV3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NIPAL1Q6NVV3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.07■■□□□ 1.44
NIPAL1Q6NVV3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
NIPAL1Q6NVV3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
NIPAL1Q6NVV3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.06■■□□□ 1.44
NIPAL1Q6NVV3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
NIPAL1Q6NVV3 MIR639-201ENST00000384974 98 ntBASIC24.06■■□□□ 1.44
NIPAL1Q6NVV3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
NIPAL1Q6NVV3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
NIPAL1Q6NVV3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NIPAL1Q6NVV3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.05■■□□□ 1.44
NIPAL1Q6NVV3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NIPAL1Q6NVV3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NIPAL1Q6NVV3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.05■■□□□ 1.44
NIPAL1Q6NVV3 AP002414.2-202ENST00000590929 1450 ntBASIC24.05■■□□□ 1.44
NIPAL1Q6NVV3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NIPAL1Q6NVV3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NIPAL1Q6NVV3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
NIPAL1Q6NVV3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NIPAL1Q6NVV3 HLA-V-202ENST00000446817 847 ntBASIC24.04■■□□□ 1.44
NIPAL1Q6NVV3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
NIPAL1Q6NVV3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NIPAL1Q6NVV3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.03■■□□□ 1.44
NIPAL1Q6NVV3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
NIPAL1Q6NVV3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
NIPAL1Q6NVV3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NIPAL1Q6NVV3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.03■■□□□ 1.44
NIPAL1Q6NVV3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NIPAL1Q6NVV3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NIPAL1Q6NVV3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.02■■□□□ 1.44
NIPAL1Q6NVV3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
NIPAL1Q6NVV3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.02■■□□□ 1.44
NIPAL1Q6NVV3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NIPAL1Q6NVV3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NIPAL1Q6NVV3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
NIPAL1Q6NVV3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
NIPAL1Q6NVV3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.01■■□□□ 1.43
NIPAL1Q6NVV3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24■■□□□ 1.43
NIPAL1Q6NVV3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24■■□□□ 1.43
NIPAL1Q6NVV3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NIPAL1Q6NVV3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24■■□□□ 1.43
NIPAL1Q6NVV3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24■■□□□ 1.43
NIPAL1Q6NVV3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24■■□□□ 1.43
NIPAL1Q6NVV3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24■■□□□ 1.43
NIPAL1Q6NVV3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NIPAL1Q6NVV3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24■■□□□ 1.43
NIPAL1Q6NVV3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
NIPAL1Q6NVV3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24■■□□□ 1.43
NIPAL1Q6NVV3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
NIPAL1Q6NVV3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
NIPAL1Q6NVV3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.99■■□□□ 1.43
NIPAL1Q6NVV3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NIPAL1Q6NVV3 AC142086.6-201ENST00000621154 1765 ntBASIC23.98■■□□□ 1.43
NIPAL1Q6NVV3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
NIPAL1Q6NVV3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
NIPAL1Q6NVV3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
NIPAL1Q6NVV3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
NIPAL1Q6NVV3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.98■■□□□ 1.43
NIPAL1Q6NVV3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
NIPAL1Q6NVV3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NIPAL1Q6NVV3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
NIPAL1Q6NVV3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NIPAL1Q6NVV3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
NIPAL1Q6NVV3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NIPAL1Q6NVV3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.97■■□□□ 1.43
NIPAL1Q6NVV3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
NIPAL1Q6NVV3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.97■■□□□ 1.43
NIPAL1Q6NVV3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.97■■□□□ 1.43
NIPAL1Q6NVV3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.97■■□□□ 1.43
NIPAL1Q6NVV3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NIPAL1Q6NVV3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
NIPAL1Q6NVV3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
NIPAL1Q6NVV3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.95■■□□□ 1.42
NIPAL1Q6NVV3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NIPAL1Q6NVV3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NIPAL1Q6NVV3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NIPAL1Q6NVV3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NIPAL1Q6NVV3 AC148477.6-201ENST00000623746 465 ntBASIC23.94■■□□□ 1.42
NIPAL1Q6NVV3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.94■■□□□ 1.42
NIPAL1Q6NVV3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.93■■□□□ 1.42
NIPAL1Q6NVV3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NIPAL1Q6NVV3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NIPAL1Q6NVV3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NIPAL1Q6NVV3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NIPAL1Q6NVV3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NIPAL1Q6NVV3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.91■■□□□ 1.42
NIPAL1Q6NVV3 MIR4449-201ENST00000578365 66 ntBASIC23.91■■□□□ 1.42
NIPAL1Q6NVV3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NIPAL1Q6NVV3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.9■■□□□ 1.42
NIPAL1Q6NVV3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.9■■□□□ 1.42
NIPAL1Q6NVV3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
NIPAL1Q6NVV3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
NIPAL1Q6NVV3 AC018358.1-201ENST00000631079 1402 ntBASIC23.89■■□□□ 1.41
NIPAL1Q6NVV3 DRD5P2-201ENST00000421395 2012 ntBASIC23.89■■□□□ 1.41
NIPAL1Q6NVV3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms