Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 RPC31YNL151C 756 nt7.68□□□□□ -1.18
VPS13Q07878 ABP1YCR088W 1779 nt7.67□□□□□ -1.18
VPS13Q07878 MAM3YOL060C 2121 nt7.67□□□□□ -1.18
VPS13Q07878 COX15YER141W 1461 nt7.67□□□□□ -1.18
VPS13Q07878 YJL163CYJL163C 1668 nt7.66□□□□□ -1.18
VPS13Q07878 PPH21YDL134C 1110 nt7.65□□□□□ -1.18
VPS13Q07878 ADE16YLR028C 1776 nt7.64□□□□□ -1.19
VPS13Q07878 TIF2YJL138C 1188 nt7.64□□□□□ -1.19
VPS13Q07878 TIF1YKR059W 1188 nt7.64□□□□□ -1.19
VPS13Q07878 IVY1YDR229W 1362 nt7.63□□□□□ -1.19
VPS13Q07878 YHL018WYHL018W 363 nt7.63□□□□□ -1.19
VPS13Q07878 GAT4YIR013C 366 nt7.63□□□□□ -1.19
VPS13Q07878 ASF1YJL115W 840 nt7.63□□□□□ -1.19
VPS13Q07878 CCW12YLR110C 402 nt7.63□□□□□ -1.19
VPS13Q07878 TAF9YMR236W 474 nt7.63□□□□□ -1.19
VPS13Q07878 GET4YOR164C 939 nt7.63□□□□□ -1.19
VPS13Q07878 MNN9YPL050C 1188 nt7.62□□□□□ -1.19
VPS13Q07878 PLB2YMR006C 2121 nt7.62□□□□□ -1.19
VPS13Q07878 PAM17YKR065C 594 nt7.62□□□□□ -1.19
VPS13Q07878 RCF1YML030W 480 nt7.61□□□□□ -1.19
VPS13Q07878 WSC3YOL105C 1671 nt7.61□□□□□ -1.19
VPS13Q07878 INA1YLR413W 2028 nt7.61□□□□□ -1.19
VPS13Q07878 MTF2YDL044C 1323 nt7.61□□□□□ -1.19
VPS13Q07878 ERP5YHR110W 639 nt7.6□□□□□ -1.19
VPS13Q07878 ERV25YML012W 636 nt7.6□□□□□ -1.19
VPS13Q07878 NAS6YGR232W 687 nt7.6□□□□□ -1.19
VPS13Q07878 YKL102CYKL102C 306 nt7.6□□□□□ -1.19
VPS13Q07878 PMT1YDL095W 2454 nt7.59□□□□□ -1.19
VPS13Q07878 VPS65YLR322W 315 nt7.59□□□□□ -1.19
VPS13Q07878 SIT4YDL047W 936 nt7.59□□□□□ -1.19
VPS13Q07878 TSR2YLR435W 618 nt7.58□□□□□ -1.2
VPS13Q07878 MRP7YNL005C 1116 nt7.58□□□□□ -1.2
VPS13Q07878 AAT1YKL106W 1356 nt7.58□□□□□ -1.2
VPS13Q07878 KRR1YCL059C 951 nt7.58□□□□□ -1.2
VPS13Q07878 SYF2YGR129W 648 nt7.58□□□□□ -1.2
VPS13Q07878 WSC4YHL028W 1818 nt7.58□□□□□ -1.2
VPS13Q07878 snR86snR86 1004 nt7.57□□□□□ -1.2
VPS13Q07878 EMP65YER140W 1671 nt7.57□□□□□ -1.2
VPS13Q07878 TDH2YJR009C 999 nt7.56□□□□□ -1.2
VPS13Q07878 YMR122CYMR122C 375 nt7.56□□□□□ -1.2
VPS13Q07878 INP54YOL065C 1155 nt7.56□□□□□ -1.2
VPS13Q07878 CPR2YHR057C 618 nt7.56□□□□□ -1.2
VPS13Q07878 MRPS12YNR036C 462 nt7.56□□□□□ -1.2
VPS13Q07878 UME6YDR207C 2511 nt7.56□□□□□ -1.2
VPS13Q07878 YPT10YBR264C 600 nt7.56□□□□□ -1.2
VPS13Q07878 FIT2YOR382W 462 nt7.55□□□□□ -1.2
VPS13Q07878 YMC2YBR104W 990 nt7.55□□□□□ -1.2
VPS13Q07878 TPO1YLL028W 1761 nt7.55□□□□□ -1.2
VPS13Q07878 YPQ2YDR352W 954 nt7.54□□□□□ -1.2
VPS13Q07878 YNL200CYNL200C 741 nt7.54□□□□□ -1.2
VPS13Q07878 GET2YER083C 858 nt7.54□□□□□ -1.2
VPS13Q07878 YDL172CYDL172C 480 nt7.54□□□□□ -1.2
VPS13Q07878 YNL097W-AYNL097W-A 156 nt7.54□□□□□ -1.2
VPS13Q07878 PPZ2YDR436W 2133 nt7.53□□□□□ -1.2
VPS13Q07878 DMC1YER179W 1005 nt7.53□□□□□ -1.2
VPS13Q07878 MSP1YGR028W 1089 nt7.53□□□□□ -1.2
VPS13Q07878 RTC4YNL254C 1206 nt7.53□□□□□ -1.2
VPS13Q07878 VMA3YEL027W 483 nt7.52□□□□□ -1.21
VPS13Q07878 APE4YHR113W 1473 nt7.52□□□□□ -1.21
VPS13Q07878 LYS21YDL131W 1323 nt7.52□□□□□ -1.21
VPS13Q07878 SNN1YNL086W 309 nt7.52□□□□□ -1.21
VPS13Q07878 URA8YJR103W 1737 nt7.52□□□□□ -1.21
VPS13Q07878 NVJ2YPR091C 2313 nt7.52□□□□□ -1.21
VPS13Q07878 EGD2YHR193C 525 nt7.52□□□□□ -1.21
VPS13Q07878 SUR7YML052W 909 nt7.52□□□□□ -1.21
VPS13Q07878 HTZ1YOL012C 405 nt7.51□□□□□ -1.21
VPS13Q07878 MRPL10YNL284C 969 nt7.5□□□□□ -1.21
VPS13Q07878 HST3YOR025W 1344 nt7.49□□□□□ -1.21
VPS13Q07878 ASR1YPR093C 867 nt7.49□□□□□ -1.21
VPS13Q07878 BRN1YBL097W 2265 nt7.48□□□□□ -1.21
VPS13Q07878 SPT20YOL148C 1815 nt7.48□□□□□ -1.21
VPS13Q07878 MPE1YKL059C 1326 nt7.48□□□□□ -1.21
VPS13Q07878 CYT2YKL087C 675 nt7.47□□□□□ -1.21
VPS13Q07878 YBR113WYBR113W 483 nt7.47□□□□□ -1.21
VPS13Q07878 MTO1YGL236C 2010 nt7.46□□□□□ -1.21
VPS13Q07878 ECM19YLR390W 339 nt7.46□□□□□ -1.21
VPS13Q07878 BUD31YCR063W 474 nt7.46□□□□□ -1.22
VPS13Q07878 HSL7YBR133C 2484 nt7.46□□□□□ -1.22
VPS13Q07878 tE(CUC)DtE(CUC)D 72 nt7.45□□□□□ -1.22
VPS13Q07878 tE(CUC)ItE(CUC)I 72 nt7.45□□□□□ -1.22
VPS13Q07878 YBR056C-BYBR056C-B 159 nt7.45□□□□□ -1.22
VPS13Q07878 YLR157W-EYLR157W-E 165 nt7.45□□□□□ -1.22
VPS13Q07878 YPC1YBR183W 951 nt7.45□□□□□ -1.22
VPS13Q07878 AMN1YBR158W 1650 nt7.44□□□□□ -1.22
VPS13Q07878 NUP49YGL172W 1419 nt7.44□□□□□ -1.22
VPS13Q07878 MOG1YJR074W 657 nt7.44□□□□□ -1.22
VPS13Q07878 CUP2YGL166W 678 nt7.43□□□□□ -1.22
VPS13Q07878 YBR027CYBR027C 333 nt7.43□□□□□ -1.22
VPS13Q07878 DLD1YDL174C 1764 nt7.43□□□□□ -1.22
VPS13Q07878 NPP2YEL016C 1482 nt7.43□□□□□ -1.22
VPS13Q07878 YNR005CYNR005C 405 nt7.43□□□□□ -1.22
VPS13Q07878 DSF1YEL070W 1509 nt7.43□□□□□ -1.22
VPS13Q07878 YNR073CYNR073C 1509 nt7.43□□□□□ -1.22
VPS13Q07878 FRA1YLL029W 2250 nt7.43□□□□□ -1.22
VPS13Q07878 RDR1YOR380W 1641 nt7.43□□□□□ -1.22
VPS13Q07878 MLS1YNL117W 1665 nt7.43□□□□□ -1.22
VPS13Q07878 YJL213WYJL213W 996 nt7.43□□□□□ -1.22
VPS13Q07878 ELP6YMR312W 822 nt7.43□□□□□ -1.22
VPS13Q07878 MRN1YPL184C 1839 nt7.42□□□□□ -1.22
VPS13Q07878 HAM1YJR069C 594 nt7.42□□□□□ -1.22
Retrieved 100 of 7,029 protein–RNA pairs in 26.9 ms