Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 AC018358.1-201ENST00000631079 1402 ntBASIC21.12■□□□□ 0.97
COL10A1Q03692 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL10A1Q03692 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.12■□□□□ 0.97
COL10A1Q03692 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.12■□□□□ 0.97
COL10A1Q03692 AC135731.1-201ENST00000569415 2548 ntBASIC21.12■□□□□ 0.97
COL10A1Q03692 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.11■□□□□ 0.97
COL10A1Q03692 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.11■□□□□ 0.97
COL10A1Q03692 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.11■□□□□ 0.97
COL10A1Q03692 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
COL10A1Q03692 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL10A1Q03692 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL10A1Q03692 ABHD17AP4-201ENST00000411545 909 ntBASIC21.1■□□□□ 0.97
COL10A1Q03692 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL10A1Q03692 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL10A1Q03692 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.09■□□□□ 0.97
COL10A1Q03692 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL10A1Q03692 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL10A1Q03692 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL10A1Q03692 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.08■□□□□ 0.97
COL10A1Q03692 DUX4L11-201ENST00000611504 1267 ntBASIC21.08■□□□□ 0.97
COL10A1Q03692 DUX4L12-201ENST00000614593 1267 ntBASIC21.08■□□□□ 0.97
COL10A1Q03692 DUX4L14-201ENST00000621227 1267 ntBASIC21.08■□□□□ 0.97
COL10A1Q03692 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL10A1Q03692 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL10A1Q03692 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL10A1Q03692 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL10A1Q03692 DUX4L13-201ENST00000554103 1267 ntBASIC21.07■□□□□ 0.96
COL10A1Q03692 DUX4L15-201ENST00000611059 1267 ntBASIC21.07■□□□□ 0.96
COL10A1Q03692 DUX4L23-201ENST00000615195 1269 ntBASIC21.07■□□□□ 0.96
COL10A1Q03692 DUX4L24-201ENST00000617576 1269 ntBASIC21.07■□□□□ 0.96
COL10A1Q03692 DUX4L22-201ENST00000618238 1269 ntBASIC21.07■□□□□ 0.96
COL10A1Q03692 DUX4L20-201ENST00000619712 1269 ntBASIC21.07■□□□□ 0.96
COL10A1Q03692 DUX4L21-201ENST00000622058 1269 ntBASIC21.07■□□□□ 0.96
COL10A1Q03692 DUX4L10-201ENST00000622460 1267 ntBASIC21.07■□□□□ 0.96
COL10A1Q03692 DUX4L25-201ENST00000624915 1269 ntBASIC21.07■□□□□ 0.96
COL10A1Q03692 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
COL10A1Q03692 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.07■□□□□ 0.96
COL10A1Q03692 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL10A1Q03692 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL10A1Q03692 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL10A1Q03692 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL10A1Q03692 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.06■□□□□ 0.96
COL10A1Q03692 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL10A1Q03692 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL10A1Q03692 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL10A1Q03692 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
COL10A1Q03692 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL10A1Q03692 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL10A1Q03692 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL10A1Q03692 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.04■□□□□ 0.96
COL10A1Q03692 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL10A1Q03692 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL10A1Q03692 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
COL10A1Q03692 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL10A1Q03692 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
COL10A1Q03692 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL10A1Q03692 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.03■□□□□ 0.96
COL10A1Q03692 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL10A1Q03692 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL10A1Q03692 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL10A1Q03692 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
COL10A1Q03692 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL10A1Q03692 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.02■□□□□ 0.96
COL10A1Q03692 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL10A1Q03692 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL10A1Q03692 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL10A1Q03692 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL10A1Q03692 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21■□□□□ 0.95
COL10A1Q03692 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21■□□□□ 0.95
COL10A1Q03692 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21■□□□□ 0.95
COL10A1Q03692 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL10A1Q03692 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL10A1Q03692 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL10A1Q03692 AL121749.1-202ENST00000609313 2153 ntBASIC20.99■□□□□ 0.95
COL10A1Q03692 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL10A1Q03692 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
COL10A1Q03692 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.99■□□□□ 0.95
COL10A1Q03692 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
COL10A1Q03692 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
COL10A1Q03692 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL10A1Q03692 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.99■□□□□ 0.95
COL10A1Q03692 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL10A1Q03692 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
COL10A1Q03692 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
COL10A1Q03692 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.98■□□□□ 0.95
COL10A1Q03692 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
COL10A1Q03692 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL10A1Q03692 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL10A1Q03692 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL10A1Q03692 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
COL10A1Q03692 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL10A1Q03692 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL10A1Q03692 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.96■□□□□ 0.95
COL10A1Q03692 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL10A1Q03692 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.96■□□□□ 0.95
COL10A1Q03692 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.96■□□□□ 0.95
COL10A1Q03692 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.96■□□□□ 0.95
COL10A1Q03692 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.96■□□□□ 0.95
COL10A1Q03692 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.96■□□□□ 0.95
COL10A1Q03692 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms