Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SEC61A1P61619 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
SEC61A1P61619 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SEC61A1P61619 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SEC61A1P61619 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SEC61A1P61619 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SEC61A1P61619 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SEC61A1P61619 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SEC61A1P61619 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SEC61A1P61619 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
SEC61A1P61619 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SEC61A1P61619 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SEC61A1P61619 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.69■■□□□ 1.06
SEC61A1P61619 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SEC61A1P61619 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
SEC61A1P61619 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SEC61A1P61619 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SEC61A1P61619 HLA-V-202ENST00000446817 847 ntBASIC21.68■■□□□ 1.06
SEC61A1P61619 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.68■■□□□ 1.06
SEC61A1P61619 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEC61A1P61619 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEC61A1P61619 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEC61A1P61619 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SEC61A1P61619 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.67■■□□□ 1.06
SEC61A1P61619 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SEC61A1P61619 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SEC61A1P61619 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SEC61A1P61619 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SEC61A1P61619 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SEC61A1P61619 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.65■■□□□ 1.06
SEC61A1P61619 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.65■■□□□ 1.06
SEC61A1P61619 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.65■■□□□ 1.06
SEC61A1P61619 LINC01971-201ENST00000617888 1048 ntBASIC21.65■■□□□ 1.06
SEC61A1P61619 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SEC61A1P61619 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.64■■□□□ 1.05
SEC61A1P61619 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.64■■□□□ 1.05
SEC61A1P61619 DUX4L11-201ENST00000611504 1267 ntBASIC21.64■■□□□ 1.05
SEC61A1P61619 DUX4L12-201ENST00000614593 1267 ntBASIC21.64■■□□□ 1.05
SEC61A1P61619 DUX4L14-201ENST00000621227 1267 ntBASIC21.64■■□□□ 1.05
SEC61A1P61619 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SEC61A1P61619 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SEC61A1P61619 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SEC61A1P61619 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEC61A1P61619 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.63■■□□□ 1.05
SEC61A1P61619 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SEC61A1P61619 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.63■■□□□ 1.05
SEC61A1P61619 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.63■■□□□ 1.05
SEC61A1P61619 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.63■■□□□ 1.05
SEC61A1P61619 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEC61A1P61619 AC127502.1-201ENST00000399971 1502 ntBASIC21.62■■□□□ 1.05
SEC61A1P61619 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SEC61A1P61619 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.62■■□□□ 1.05
SEC61A1P61619 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SEC61A1P61619 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SEC61A1P61619 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SEC61A1P61619 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.61■■□□□ 1.05
SEC61A1P61619 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.61■■□□□ 1.05
SEC61A1P61619 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SEC61A1P61619 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SEC61A1P61619 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.6■■□□□ 1.05
SEC61A1P61619 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.59■■□□□ 1.05
SEC61A1P61619 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SEC61A1P61619 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.59■■□□□ 1.05
SEC61A1P61619 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.59■■□□□ 1.05
SEC61A1P61619 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SEC61A1P61619 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SEC61A1P61619 CR559946.2-201ENST00000623684 991 ntBASIC21.58■■□□□ 1.05
SEC61A1P61619 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SEC61A1P61619 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.57■■□□□ 1.04
SEC61A1P61619 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
SEC61A1P61619 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.57■■□□□ 1.04
SEC61A1P61619 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.57■■□□□ 1.04
SEC61A1P61619 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.57■■□□□ 1.04
SEC61A1P61619 MIR3648-2-201ENST00000581792 180 ntBASIC21.57■■□□□ 1.04
SEC61A1P61619 AC016575.1-201ENST00000607026 382 ntBASIC21.57■■□□□ 1.04
SEC61A1P61619 MIR3648-1-201ENST00000615959 180 ntBASIC21.57■■□□□ 1.04
SEC61A1P61619 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.57■■□□□ 1.04
SEC61A1P61619 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SEC61A1P61619 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SEC61A1P61619 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SEC61A1P61619 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SEC61A1P61619 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SEC61A1P61619 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.56■■□□□ 1.04
SEC61A1P61619 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SEC61A1P61619 LINC00273-201ENST00000539813 1452 ntBASIC21.56■■□□□ 1.04
SEC61A1P61619 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.56■■□□□ 1.04
SEC61A1P61619 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SEC61A1P61619 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SEC61A1P61619 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEC61A1P61619 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEC61A1P61619 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEC61A1P61619 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SEC61A1P61619 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.55■■□□□ 1.04
SEC61A1P61619 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.55■■□□□ 1.04
SEC61A1P61619 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.55■■□□□ 1.04
SEC61A1P61619 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SEC61A1P61619 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SEC61A1P61619 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.54■■□□□ 1.04
SEC61A1P61619 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SEC61A1P61619 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms