Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
ZC3H6P61129 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC34.31■■■■□ 3.08
ZC3H6P61129 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC34.31■■■■□ 3.08
ZC3H6P61129 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC34.31■■■■□ 3.08
ZC3H6P61129 AC009831.1-201ENST00000580420 1582 ntBASIC34.31■■■■□ 3.08
ZC3H6P61129 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
ZC3H6P61129 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
ZC3H6P61129 AC133552.2-201ENST00000619106 1032 ntBASIC34.3■■■■□ 3.08
ZC3H6P61129 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
ZC3H6P61129 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC34.29■■■■□ 3.08
ZC3H6P61129 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC34.29■■■■□ 3.08
ZC3H6P61129 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC34.29■■■■□ 3.08
ZC3H6P61129 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC34.29■■■■□ 3.08
ZC3H6P61129 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
ZC3H6P61129 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
ZC3H6P61129 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
ZC3H6P61129 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
ZC3H6P61129 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
ZC3H6P61129 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
ZC3H6P61129 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
ZC3H6P61129 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC34.25■■■■□ 3.07
ZC3H6P61129 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC34.24■■■■□ 3.07
ZC3H6P61129 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
ZC3H6P61129 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC34.23■■■■□ 3.07
ZC3H6P61129 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
ZC3H6P61129 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
ZC3H6P61129 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC34.23■■■■□ 3.07
ZC3H6P61129 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC34.23■■■■□ 3.07
ZC3H6P61129 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
ZC3H6P61129 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC34.21■■■■□ 3.07
ZC3H6P61129 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC34.21■■■■□ 3.07
ZC3H6P61129 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC34.21■■■■□ 3.07
ZC3H6P61129 AL035685.1-201ENST00000636663 812 ntBASIC34.21■■■■□ 3.07
ZC3H6P61129 AL451085.2-201ENST00000605085 799 ntBASIC34.2■■■■□ 3.07
ZC3H6P61129 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC34.19■■■■□ 3.06
ZC3H6P61129 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
ZC3H6P61129 REST-210ENST00000638187 1334 ntTSL 5 BASIC34.18■■■■□ 3.06
ZC3H6P61129 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
ZC3H6P61129 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC34.18■■■■□ 3.06
ZC3H6P61129 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC34.17■■■■□ 3.06
ZC3H6P61129 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
ZC3H6P61129 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC34.16■■■■□ 3.06
ZC3H6P61129 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
ZC3H6P61129 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC34.16■■■■□ 3.06
ZC3H6P61129 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC34.16■■■■□ 3.06
ZC3H6P61129 SMPD5-203ENST00000639008 1464 ntBASIC34.15■■■■□ 3.06
ZC3H6P61129 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC34.15■■■■□ 3.06
ZC3H6P61129 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
ZC3H6P61129 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC34.14■■■■□ 3.06
ZC3H6P61129 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
ZC3H6P61129 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
ZC3H6P61129 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC34.13■■■■□ 3.05
ZC3H6P61129 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC34.12■■■■□ 3.05
ZC3H6P61129 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC34.12■■■■□ 3.05
ZC3H6P61129 AC026202.3-201ENST00000600805 1127 ntBASIC34.12■■■■□ 3.05
ZC3H6P61129 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC34.11■■■■□ 3.05
ZC3H6P61129 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC34.11■■■■□ 3.05
ZC3H6P61129 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
ZC3H6P61129 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
ZC3H6P61129 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC34.11■■■■□ 3.05
ZC3H6P61129 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC34.1■■■■□ 3.05
ZC3H6P61129 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
ZC3H6P61129 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC34.1■■■■□ 3.05
ZC3H6P61129 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC34.09■■■■□ 3.05
ZC3H6P61129 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC34.09■■■■□ 3.05
ZC3H6P61129 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC34.08■■■■□ 3.05
ZC3H6P61129 AL359258.2-201ENST00000564063 1566 ntBASIC34.08■■■■□ 3.05
ZC3H6P61129 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
ZC3H6P61129 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC34.07■■■■□ 3.05
ZC3H6P61129 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC34.07■■■■□ 3.04
ZC3H6P61129 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC34.07■■■■□ 3.04
ZC3H6P61129 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
ZC3H6P61129 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
ZC3H6P61129 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC34.05■■■■□ 3.04
ZC3H6P61129 DUX4L9-201ENST00000449051 1259 ntBASIC34.05■■■■□ 3.04
ZC3H6P61129 TRIR-205ENST00000592273 783 ntTSL 3 BASIC34.05■■■■□ 3.04
ZC3H6P61129 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC34.05■■■■□ 3.04
ZC3H6P61129 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC34.05■■■■□ 3.04
ZC3H6P61129 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
ZC3H6P61129 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
ZC3H6P61129 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC34.04■■■■□ 3.04
ZC3H6P61129 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC34.04■■■■□ 3.04
ZC3H6P61129 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC34.04■■■■□ 3.04
ZC3H6P61129 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
ZC3H6P61129 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC34.03■■■■□ 3.04
ZC3H6P61129 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
ZC3H6P61129 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC34.02■■■■□ 3.04
ZC3H6P61129 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC34.02■■■■□ 3.04
ZC3H6P61129 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC34.01■■■■□ 3.04
ZC3H6P61129 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC34.01■■■■□ 3.04
ZC3H6P61129 AC010980.1-201ENST00000587192 1142 ntBASIC34.01■■■■□ 3.03
ZC3H6P61129 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC34.01■■■■□ 3.03
ZC3H6P61129 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC34■■■■□ 3.03
ZC3H6P61129 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
ZC3H6P61129 AC100797.4-201ENST00000631653 1827 ntBASIC34■■■■□ 3.03
ZC3H6P61129 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC33.99■■■■□ 3.03
ZC3H6P61129 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC33.99■■■■□ 3.03
ZC3H6P61129 KRT8P33-201ENST00000508125 1423 ntBASIC33.98■■■■□ 3.03
ZC3H6P61129 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
ZC3H6P61129 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC33.98■■■■□ 3.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms