Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.15■■□□□ 1.78
CDH6P55285 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.15■■□□□ 1.78
CDH6P55285 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
CDH6P55285 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDH6P55285 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
CDH6P55285 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDH6P55285 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
CDH6P55285 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.14■■□□□ 1.78
CDH6P55285 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.14■■□□□ 1.78
CDH6P55285 LINC01971-201ENST00000617888 1048 ntBASIC26.14■■□□□ 1.78
CDH6P55285 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDH6P55285 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDH6P55285 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CDH6P55285 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.13■■□□□ 1.77
CDH6P55285 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.13■■□□□ 1.77
CDH6P55285 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CDH6P55285 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CDH6P55285 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
CDH6P55285 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDH6P55285 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDH6P55285 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
CDH6P55285 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDH6P55285 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CDH6P55285 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDH6P55285 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDH6P55285 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.11■■□□□ 1.77
CDH6P55285 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.11■■□□□ 1.77
CDH6P55285 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDH6P55285 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.11■■□□□ 1.77
CDH6P55285 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.1■■□□□ 1.77
CDH6P55285 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.1■■□□□ 1.77
CDH6P55285 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.1■■□□□ 1.77
CDH6P55285 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CDH6P55285 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDH6P55285 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDH6P55285 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
CDH6P55285 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CDH6P55285 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CDH6P55285 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
CDH6P55285 ABHD17AP4-201ENST00000411545 909 ntBASIC26.08■■□□□ 1.77
CDH6P55285 ZNRF2P2-203ENST00000454624 420 ntBASIC26.08■■□□□ 1.77
CDH6P55285 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CDH6P55285 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
CDH6P55285 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CDH6P55285 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CDH6P55285 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CDH6P55285 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CDH6P55285 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CDH6P55285 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CDH6P55285 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CDH6P55285 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDH6P55285 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.06■■□□□ 1.76
CDH6P55285 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.06■■□□□ 1.76
CDH6P55285 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CDH6P55285 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CDH6P55285 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
CDH6P55285 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
CDH6P55285 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDH6P55285 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CDH6P55285 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.04■■□□□ 1.76
CDH6P55285 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDH6P55285 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDH6P55285 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDH6P55285 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDH6P55285 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDH6P55285 DUX4L13-201ENST00000554103 1267 ntBASIC26.03■■□□□ 1.76
CDH6P55285 DUX4L15-201ENST00000611059 1267 ntBASIC26.03■■□□□ 1.76
CDH6P55285 DUX4L11-201ENST00000611504 1267 ntBASIC26.03■■□□□ 1.76
CDH6P55285 DUX4L12-201ENST00000614593 1267 ntBASIC26.03■■□□□ 1.76
CDH6P55285 DUX4L23-201ENST00000615195 1269 ntBASIC26.03■■□□□ 1.76
CDH6P55285 DUX4L24-201ENST00000617576 1269 ntBASIC26.03■■□□□ 1.76
CDH6P55285 DUX4L22-201ENST00000618238 1269 ntBASIC26.03■■□□□ 1.76
CDH6P55285 DUX4L20-201ENST00000619712 1269 ntBASIC26.03■■□□□ 1.76
CDH6P55285 DUX4L14-201ENST00000621227 1267 ntBASIC26.03■■□□□ 1.76
CDH6P55285 DUX4L21-201ENST00000622058 1269 ntBASIC26.03■■□□□ 1.76
CDH6P55285 DUX4L10-201ENST00000622460 1267 ntBASIC26.03■■□□□ 1.76
CDH6P55285 DUX4L25-201ENST00000624915 1269 ntBASIC26.03■■□□□ 1.76
CDH6P55285 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
CDH6P55285 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.03■■□□□ 1.76
CDH6P55285 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDH6P55285 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDH6P55285 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
CDH6P55285 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
CDH6P55285 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CDH6P55285 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CDH6P55285 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.01■■□□□ 1.75
CDH6P55285 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.01■■□□□ 1.75
CDH6P55285 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26■■□□□ 1.75
CDH6P55285 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CDH6P55285 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26■■□□□ 1.75
CDH6P55285 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26■■□□□ 1.75
CDH6P55285 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDH6P55285 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.99■■□□□ 1.75
CDH6P55285 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDH6P55285 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.98■■□□□ 1.75
CDH6P55285 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.98■■□□□ 1.75
CDH6P55285 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.98■■□□□ 1.75
CDH6P55285 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
CDH6P55285 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.97■■□□□ 1.75
CDH6P55285 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms