Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 FCGR2A-205ENST00000467525 1642 ntTSL 57.67□□□□□ -1.181e-12■■■■■ 59
SUB1P53999 FCGR2A-201ENST00000271450 2412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.221e-12■■■■■ 59
SUB1P53999 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.331e-12■■■■■ 59
SUB1P53999 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.331e-12■■■■■ 59
SUB1P53999 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.431e-12■■■■■ 59
SUB1P53999 UBAP2-212ENST00000629575 3460 ntTSL 25.93□□□□□ -1.461e-12■■■■■ 59
SUB1P53999 FCGR2A-207ENST00000471026 731 ntTSL 35.71□□□□□ -1.51e-12■■■■■ 59
SUB1P53999 FCGR2A-212ENST00000491841 730 ntTSL 33.94□□□□□ -1.781e-12■■■■■ 59
SUB1P53999 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.88□□□□□ -1.791e-12■■■■■ 59
SUB1P53999 FCGR2A-211ENST00000486608 884 ntTSL 33.72□□□□□ -1.811e-12■■■■■ 59
SUB1P53999 TIMMDC1-209ENST00000498399 684 ntTSL 23.04□□□□□ -1.921e-12■■■■■ 59
SUB1P53999 FCGR2A-204ENST00000461298 805 ntTSL 22.25□□□□□ -2.051e-12■■■■■ 59
SUB1P53999 FCGR2A-203ENST00000459885 259 ntTSL 30.34□□□□□ -2.361e-12■■■■■ 59
SUB1P53999 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.312e-10■■■■■ 58.8
SUB1P53999 ATP6AP1-207ENST00000455205 4515 ntTSL 213.2□□□□□ -0.32e-10■■■■■ 58.8
SUB1P53999 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.749e-7■■■■■ 58.8
SUB1P53999 POLR2G-202ENST00000524819 1053 ntTSL 39.91□□□□□ -0.829e-7■■■■■ 58.8
SUB1P53999 POLR2G-203ENST00000525455 919 ntTSL 39.59□□□□□ -0.879e-7■■■■■ 58.8
SUB1P53999 POLR2G-206ENST00000531944 1556 ntTSL 58.7□□□□□ -1.029e-7■■■■■ 58.8
SUB1P53999 POLR2G-205ENST00000527435 868 ntTSL 27.01□□□□□ -1.299e-7■■■■■ 58.8
SUB1P53999 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.861e-9■■■■■ 58.6
SUB1P53999 RPL9-208ENST00000508595 667 ntTSL 32.8□□□□□ -1.961e-9■■■■■ 58.6
SUB1P53999 VDAC2-207ENST00000460044 770 ntTSL 28.7□□□□□ -1.022e-25■■■■■ 58.6
SUB1P53999 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.086e-16■■■■■ 58.5
SUB1P53999 CMAS-202ENST00000534981 1575 ntTSL 1 (best)15.53■□□□□ 0.086e-16■■■■■ 58.5
SUB1P53999 ALDOA-215ENST00000565355 538 ntTSL 511.74□□□□□ -0.537e-27■■■■■ 58.5
SUB1P53999 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.215e-7■■■■■ 58.3
SUB1P53999 MED12-203ENST00000374102 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.786e-9■■■■■ 58.3
SUB1P53999 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.946e-9■■■■■ 58.3
SUB1P53999 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.086e-9■■■■■ 58.3
SUB1P53999 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.597e-8■■■■■ 57.9
SUB1P53999 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.33□□□□□ -1.727e-8■■■■■ 57.9
SUB1P53999 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.737e-8■■■■■ 57.9
SUB1P53999 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.767e-8■■■■■ 57.9
SUB1P53999 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.03□□□□□ -1.767e-8■■■■■ 57.9
SUB1P53999 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.622e-7■■■■■ 57.9
SUB1P53999 PINK1-202ENST00000400490 1658 ntTSL 213.21□□□□□ -0.292e-7■■■■■ 57.9
SUB1P53999 PINK1-203ENST00000492302 3821 ntTSL 26.11□□□□□ -1.432e-7■■■■■ 57.9
SUB1P53999 ATP5C1-209ENST00000480528 460 ntTSL 22.24□□□□□ -2.053e-55■■■■■ 57.7
SUB1P53999 ATP5C1-208ENST00000473809 530 ntTSL 22.21□□□□□ -2.063e-55■■■■■ 57.7
SUB1P53999 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.92□□□□□ -0.51e-31■■■■■ 57.4
SUB1P53999 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.641e-31■■■■■ 57.4
SUB1P53999 YWHAE-202ENST00000466227 1377 ntTSL 57.73□□□□□ -1.171e-31■■■■■ 57.4
SUB1P53999 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.345e-7■■■■■ 57.4
SUB1P53999 DDX5-218ENST00000581693 2156 ntTSL 59.37□□□□□ -0.915e-7■■■■■ 57.4
SUB1P53999 DDX5-203ENST00000540698 2225 ntTSL 59.22□□□□□ -0.935e-7■■■■■ 57.4
SUB1P53999 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC8.76□□□□□ -1.015e-7■■■■■ 57.4
SUB1P53999 DDX5-215ENST00000581230 3558 ntTSL 26.52□□□□□ -1.375e-7■■■■■ 57.4
SUB1P53999 EIF4A2-215ENST00000467585 570 ntTSL 29.8□□□□□ -0.841e-10■■■■■ 57.3
SUB1P53999 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.741e-10■■■■■ 57.3
SUB1P53999 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC10.44□□□□□ -0.741e-10■■■■■ 57.3
SUB1P53999 CCT8-204ENST00000470450 1872 ntTSL 1 (best)7.57□□□□□ -1.21e-10■■■■■ 57.3
SUB1P53999 CCT8-212ENST00000626972 1862 ntTSL 2 BASIC7.04□□□□□ -1.281e-10■■■■■ 57.3
SUB1P53999 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.11□□□□□ -1.595e-7■■■■■ 57.1
SUB1P53999 NCL-207ENST00000461347 3967 ntTSL 212.18□□□□□ -0.464e-10■■■■■ 57
SUB1P53999 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.247e-10■■■■■ 56.7
SUB1P53999 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.26e-17■■■■■ 56.7
SUB1P53999 AC092073.1-201ENST00000592740 625 ntAPPRIS P1 TSL 313.32□□□□□ -0.281e-20■■■■■ 56.7
SUB1P53999 GPI-202ENST00000415930 4000 ntTSL 2 BASIC6.46□□□□□ -1.381e-20■■■■■ 56.7
SUB1P53999 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.524e-12■■■■■ 56.6
SUB1P53999 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.38■□□□□ 0.374e-12■■■■■ 56.6
SUB1P53999 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.374e-12■■■■■ 56.6
SUB1P53999 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.18■□□□□ 0.024e-12■■■■■ 56.6
SUB1P53999 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.51□□□□□ -0.254e-12■■■■■ 56.6
SUB1P53999 CHEK1-210ENST00000528276 1814 ntTSL 211.45□□□□□ -0.584e-12■■■■■ 56.6
SUB1P53999 CHEK1-203ENST00000428830 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.774e-12■■■■■ 56.6
SUB1P53999 WRNIP1-201ENST00000380764 1557 ntTSL 2 BASIC9.41□□□□□ -0.94e-12■■■■■ 56.6
SUB1P53999 CHEK1-204ENST00000438015 4153 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.954e-12■■■■■ 56.6
SUB1P53999 CHEK1-201ENST00000278916 1712 ntTSL 5 BASIC9.02□□□□□ -0.974e-12■■■■■ 56.6
SUB1P53999 CHEK1-213ENST00000532449 4051 ntTSL 2 BASIC8.94□□□□□ -0.984e-12■■■■■ 56.6
SUB1P53999 CHEK1-206ENST00000524737 1799 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.084e-12■■■■■ 56.6
SUB1P53999 CHEK1-218ENST00000544373 1653 ntTSL 1 (best) BASIC7.92□□□□□ -1.144e-12■■■■■ 56.6
SUB1P53999 CHEK1-205ENST00000498122 755 ntTSL 26.72□□□□□ -1.334e-12■■■■■ 56.6
SUB1P53999 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.594e-12■■■■■ 56.6
SUB1P53999 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC4.66□□□□□ -1.664e-12■■■■■ 56.6
SUB1P53999 NUP133-204ENST00000490352 643 ntTSL 21.72□□□□□ -2.133e-23■■■■■ 56.6
SUB1P53999 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.62■□□□□ 0.734e-13■■■■■ 56.5
SUB1P53999 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.15■□□□□ 0.344e-13■■■■■ 56.5
SUB1P53999 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.53■□□□□ 0.084e-13■■■■■ 56.5
SUB1P53999 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.034e-13■■■■■ 56.5
SUB1P53999 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.12■□□□□ 0.014e-13■■■■■ 56.5
SUB1P53999 TSPAN3-209ENST00000560715 2892 ntTSL 25.28□□□□□ -1.564e-13■■■■■ 56.5
SUB1P53999 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.78□□□□□ -0.041e-9■■■■■ 56.5
SUB1P53999 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.35□□□□□ -0.431e-9■■■■■ 56.5
SUB1P53999 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.731e-9■■■■■ 56.5
SUB1P53999 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC10.47□□□□□ -0.731e-9■■■■■ 56.5
SUB1P53999 UQCRH-203ENST00000486951 687 ntTSL 39.31□□□□□ -0.921e-323■■■■■ 56.4
SUB1P53999 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC10.04□□□□□ -0.82e-25■■■■■ 56.2
SUB1P53999 NTPCR-202ENST00000366628 6311 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.952e-13■■■■■ 56.2
SUB1P53999 NTPCR-207ENST00000494689 767 ntTSL 28.91□□□□□ -0.982e-13■■■■■ 56.2
SUB1P53999 NTPCR-208ENST00000496662 882 ntTSL 28.44□□□□□ -1.062e-13■■■■■ 56.2
SUB1P53999 NTPCR-206ENST00000490807 980 ntTSL 27.95□□□□□ -1.142e-13■■■■■ 56.2
SUB1P53999 NTPCR-205ENST00000490098 8705 ntTSL 1 (best)6.92□□□□□ -1.32e-13■■■■■ 56.2
SUB1P53999 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.59□□□□□ -0.236e-30■■■■■ 56.1
SUB1P53999 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.446e-30■■■■■ 56.1
SUB1P53999 COQ8A-206ENST00000479852 1938 ntTSL 1 (best)17.41■□□□□ 0.387e-8■■■■■ 56
SUB1P53999 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.177e-8■■■■■ 56
SUB1P53999 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.44□□□□□ -0.267e-8■■■■■ 56
SUB1P53999 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.367e-8■■■■■ 56
SUB1P53999 COQ8A-207ENST00000485462 2141 ntTSL 1 (best)12.58□□□□□ -0.47e-8■■■■■ 56
Retrieved 100 of 11,644 protein–RNA pairs in 34.4 ms