Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 FCGR2A-205ENST00000467525 1642 ntTSL 57.67□□□□□ -1.181e-12■■■■■ 59
SUB1P53999 FCGR2A-201ENST00000271450 2412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.221e-12■■■■■ 59
SUB1P53999 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.331e-12■■■■■ 59
SUB1P53999 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.331e-12■■■■■ 59
SUB1P53999 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.431e-12■■■■■ 59
SUB1P53999 UBAP2-212ENST00000629575 3460 ntTSL 25.93□□□□□ -1.461e-12■■■■■ 59
SUB1P53999 FCGR2A-207ENST00000471026 731 ntTSL 35.71□□□□□ -1.51e-12■■■■■ 59
SUB1P53999 FCGR2A-212ENST00000491841 730 ntTSL 33.94□□□□□ -1.781e-12■■■■■ 59
SUB1P53999 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.88□□□□□ -1.791e-12■■■■■ 59
SUB1P53999 FCGR2A-211ENST00000486608 884 ntTSL 33.72□□□□□ -1.811e-12■■■■■ 59
SUB1P53999 TIMMDC1-209ENST00000498399 684 ntTSL 23.04□□□□□ -1.921e-12■■■■■ 59
SUB1P53999 FCGR2A-204ENST00000461298 805 ntTSL 22.25□□□□□ -2.051e-12■■■■■ 59
SUB1P53999 FCGR2A-203ENST00000459885 259 ntTSL 30.34□□□□□ -2.361e-12■■■■■ 59
SUB1P53999 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.312e-10■■■■■ 58.8
SUB1P53999 ATP6AP1-207ENST00000455205 4515 ntTSL 213.2□□□□□ -0.32e-10■■■■■ 58.8
SUB1P53999 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.749e-7■■■■■ 58.8
SUB1P53999 POLR2G-202ENST00000524819 1053 ntTSL 39.91□□□□□ -0.829e-7■■■■■ 58.8
SUB1P53999 POLR2G-203ENST00000525455 919 ntTSL 39.59□□□□□ -0.879e-7■■■■■ 58.8
SUB1P53999 POLR2G-206ENST00000531944 1556 ntTSL 58.7□□□□□ -1.029e-7■■■■■ 58.8
SUB1P53999 POLR2G-205ENST00000527435 868 ntTSL 27.01□□□□□ -1.299e-7■■■■■ 58.8
SUB1P53999 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.861e-9■■■■■ 58.6
SUB1P53999 RPL9-208ENST00000508595 667 ntTSL 32.8□□□□□ -1.961e-9■■■■■ 58.6
SUB1P53999 VDAC2-207ENST00000460044 770 ntTSL 28.7□□□□□ -1.022e-25■■■■■ 58.6
SUB1P53999 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.086e-16■■■■■ 58.5
SUB1P53999 CMAS-202ENST00000534981 1575 ntTSL 1 (best)15.53■□□□□ 0.086e-16■■■■■ 58.5
SUB1P53999 ALDOA-215ENST00000565355 538 ntTSL 511.74□□□□□ -0.537e-27■■■■■ 58.5
SUB1P53999 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.215e-7■■■■■ 58.3
SUB1P53999 MED12-203ENST00000374102 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.786e-9■■■■■ 58.3
SUB1P53999 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.946e-9■■■■■ 58.3
SUB1P53999 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.086e-9■■■■■ 58.3
SUB1P53999 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.597e-8■■■■■ 57.9
SUB1P53999 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.33□□□□□ -1.727e-8■■■■■ 57.9
SUB1P53999 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.737e-8■■■■■ 57.9
SUB1P53999 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.767e-8■■■■■ 57.9
SUB1P53999 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.03□□□□□ -1.767e-8■■■■■ 57.9
SUB1P53999 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.622e-7■■■■■ 57.9
SUB1P53999 PINK1-202ENST00000400490 1658 ntTSL 213.21□□□□□ -0.292e-7■■■■■ 57.9
SUB1P53999 PINK1-203ENST00000492302 3821 ntTSL 26.11□□□□□ -1.432e-7■■■■■ 57.9
SUB1P53999 ATP5C1-209ENST00000480528 460 ntTSL 22.24□□□□□ -2.053e-55■■■■■ 57.7
SUB1P53999 ATP5C1-208ENST00000473809 530 ntTSL 22.21□□□□□ -2.063e-55■■■■■ 57.7
SUB1P53999 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.92□□□□□ -0.51e-31■■■■■ 57.4
SUB1P53999 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.641e-31■■■■■ 57.4
SUB1P53999 YWHAE-202ENST00000466227 1377 ntTSL 57.73□□□□□ -1.171e-31■■■■■ 57.4
SUB1P53999 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.345e-7■■■■■ 57.4
SUB1P53999 DDX5-218ENST00000581693 2156 ntTSL 59.37□□□□□ -0.915e-7■■■■■ 57.4
SUB1P53999 DDX5-203ENST00000540698 2225 ntTSL 59.22□□□□□ -0.935e-7■■■■■ 57.4
SUB1P53999 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC8.76□□□□□ -1.015e-7■■■■■ 57.4
SUB1P53999 DDX5-215ENST00000581230 3558 ntTSL 26.52□□□□□ -1.375e-7■■■■■ 57.4
SUB1P53999 EIF4A2-215ENST00000467585 570 ntTSL 29.8□□□□□ -0.841e-10■■■■■ 57.3
SUB1P53999 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.741e-10■■■■■ 57.3
SUB1P53999 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC10.44□□□□□ -0.741e-10■■■■■ 57.3
SUB1P53999 CCT8-204ENST00000470450 1872 ntTSL 1 (best)7.57□□□□□ -1.21e-10■■■■■ 57.3
SUB1P53999 CCT8-212ENST00000626972 1862 ntTSL 2 BASIC7.04□□□□□ -1.281e-10■■■■■ 57.3
SUB1P53999 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.11□□□□□ -1.595e-7■■■■■ 57.1
SUB1P53999 NCL-207ENST00000461347 3967 ntTSL 212.18□□□□□ -0.464e-10■■■■■ 57
SUB1P53999 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.247e-10■■■■■ 56.7
SUB1P53999 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.26e-17■■■■■ 56.7
SUB1P53999 AC092073.1-201ENST00000592740 625 ntAPPRIS P1 TSL 313.32□□□□□ -0.281e-20■■■■■ 56.7
SUB1P53999 GPI-202ENST00000415930 4000 ntTSL 2 BASIC6.46□□□□□ -1.381e-20■■■■■ 56.7
SUB1P53999 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.524e-12■■■■■ 56.6
SUB1P53999 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.38■□□□□ 0.374e-12■■■■■ 56.6
SUB1P53999 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.374e-12■■■■■ 56.6
SUB1P53999 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.18■□□□□ 0.024e-12■■■■■ 56.6
SUB1P53999 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.51□□□□□ -0.254e-12■■■■■ 56.6
SUB1P53999 CHEK1-210ENST00000528276 1814 ntTSL 211.45□□□□□ -0.584e-12■■■■■ 56.6
SUB1P53999 CHEK1-203ENST00000428830 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.774e-12■■■■■ 56.6
SUB1P53999 WRNIP1-201ENST00000380764 1557 ntTSL 2 BASIC9.41□□□□□ -0.94e-12■■■■■ 56.6
SUB1P53999 CHEK1-204ENST00000438015 4153 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.954e-12■■■■■ 56.6
SUB1P53999 CHEK1-201ENST00000278916 1712 ntTSL 5 BASIC9.02□□□□□ -0.974e-12■■■■■ 56.6
SUB1P53999 CHEK1-213ENST00000532449 4051 ntTSL 2 BASIC8.94□□□□□ -0.984e-12■■■■■ 56.6
SUB1P53999 CHEK1-206ENST00000524737 1799 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.084e-12■■■■■ 56.6
SUB1P53999 CHEK1-218ENST00000544373 1653 ntTSL 1 (best) BASIC7.92□□□□□ -1.144e-12■■■■■ 56.6
SUB1P53999 CHEK1-205ENST00000498122 755 ntTSL 26.72□□□□□ -1.334e-12■■■■■ 56.6
SUB1P53999 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.594e-12■■■■■ 56.6
SUB1P53999 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC4.66□□□□□ -1.664e-12■■■■■ 56.6
SUB1P53999 NUP133-204ENST00000490352 643 ntTSL 21.72□□□□□ -2.133e-23■■■■■ 56.6
SUB1P53999 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.62■□□□□ 0.734e-13■■■■■ 56.5
SUB1P53999 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.15■□□□□ 0.344e-13■■■■■ 56.5
SUB1P53999 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.53■□□□□ 0.084e-13■■■■■ 56.5
SUB1P53999 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.034e-13■■■■■ 56.5
SUB1P53999 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.12■□□□□ 0.014e-13■■■■■ 56.5
SUB1P53999 TSPAN3-209ENST00000560715 2892 ntTSL 25.28□□□□□ -1.564e-13■■■■■ 56.5
SUB1P53999 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.78□□□□□ -0.041e-9■■■■■ 56.5
SUB1P53999 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.35□□□□□ -0.431e-9■■■■■ 56.5
SUB1P53999 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.731e-9■■■■■ 56.5
SUB1P53999 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC10.47□□□□□ -0.731e-9■■■■■ 56.5
SUB1P53999 UQCRH-203ENST00000486951 687 ntTSL 39.31□□□□□ -0.921e-323■■■■■ 56.4
SUB1P53999 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC10.04□□□□□ -0.82e-25■■■■■ 56.2
SUB1P53999 NTPCR-202ENST00000366628 6311 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.952e-13■■■■■ 56.2
SUB1P53999 NTPCR-207ENST00000494689 767 ntTSL 28.91□□□□□ -0.982e-13■■■■■ 56.2
SUB1P53999 NTPCR-208ENST00000496662 882 ntTSL 28.44□□□□□ -1.062e-13■■■■■ 56.2
SUB1P53999 NTPCR-206ENST00000490807 980 ntTSL 27.95□□□□□ -1.142e-13■■■■■ 56.2
SUB1P53999 NTPCR-205ENST00000490098 8705 ntTSL 1 (best)6.92□□□□□ -1.32e-13■■■■■ 56.2
SUB1P53999 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.59□□□□□ -0.236e-30■■■■■ 56.1
SUB1P53999 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.446e-30■■■■■ 56.1
SUB1P53999 COQ8A-206ENST00000479852 1938 ntTSL 1 (best)17.41■□□□□ 0.387e-8■■■■■ 56
SUB1P53999 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.177e-8■■■■■ 56
SUB1P53999 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.44□□□□□ -0.267e-8■■■■■ 56
SUB1P53999 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.367e-8■■■■■ 56
SUB1P53999 COQ8A-207ENST00000485462 2141 ntTSL 1 (best)12.58□□□□□ -0.47e-8■■■■■ 56
Retrieved 100 of 11,644 protein–RNA pairs in 215.9 ms