RNA–Protein interactions for RNA: ENST00000473809.5

ATP5C1-208, Transcript of ATP synthase subunit gamma, mitochondrial, humanhuman

TSL 2

Gene ATP5C1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5C1-208ENST00000473809 AEBP2Q6ZN18 517 aaPredicted RBP19.32■□□□□ 0.68
ATP5C1-208ENST00000473809 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
ATP5C1-208ENST00000473809 SENP3Q9H4L4 574 aaPredicted RBP16.8■□□□□ 0.28
ATP5C1-208ENST00000473809 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
ATP5C1-208ENST00000473809 FOXD1Q16676 465 aa15.57■□□□□ 0.08
ATP5C1-208ENST00000473809 POTEDQ86YR6 584 aa15.31■□□□□ 0.04
ATP5C1-208ENST00000473809 MSH5O43196 834 aa14.96□□□□□ -0.01
ATP5C1-208ENST00000473809 PIAS4Q8N2W9 510 aaPredicted RBP14.56□□□□□ -0.08
ATP5C1-208ENST00000473809 PLPPR3Q6T4P5 718 aa14.25□□□□□ -0.13
ATP5C1-208ENST00000473809 ADRA2BP18089 450 aa14.09□□□□□ -0.15
ATP5C1-208ENST00000473809 PPP6R1Q9UPN7 881 aa14.09□□□□□ -0.15
ATP5C1-208ENST00000473809 DMRT2Q9Y5R5 561 aa13.16□□□□□ -0.3
ATP5C1-208ENST00000473809 SCAF1Q9H7N4 1312 aaKnown RBP13.15□□□□□ -0.3
ATP5C1-208ENST00000473809 CACNB1Q02641 598 aaPredicted RBP13.15□□□□□ -0.3
ATP5C1-208ENST00000473809 MAPK8IP2Q13387 824 aaPredicted RBP13.06□□□□□ -0.32
ATP5C1-208ENST00000473809 DCAF8L1A6NGE4 600 aa12.84□□□□□ -0.35
ATP5C1-208ENST00000473809 RNF39Q9H2S5 420 aa12.58□□□□□ -0.4
ATP5C1-208ENST00000473809 C1QBPQ07021 282 aaKnown RBP12.48□□□□□ -0.41
ATP5C1-208ENST00000473809 HOXD11P31277 338 aaPredicted RBP12.45□□□□□ -0.42
ATP5C1-208ENST00000473809 PPP4R3CPQ6ZMV5 832 aa12.36□□□□□ -0.43
ATP5C1-208ENST00000473809 CNKSR2Q8WXI2 1034 aa12.3□□□□□ -0.44
ATP5C1-208ENST00000473809 RNF216Q9NWF9 866 aaPredicted RBP12.29□□□□□ -0.44
ATP5C1-208ENST00000473809 DNAJC5BQ9UF47 199 aa12.18□□□□□ -0.46
ATP5C1-208ENST00000473809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.03□□□□□ -0.481e-7■□□□□ 8.2
ATP5C1-208ENST00000473809 POTEHQ6S545 545 aa11.97□□□□□ -0.49
ATP5C1-208ENST00000473809 KCNA4P22459 653 aa11.93□□□□□ -0.5
ATP5C1-208ENST00000473809 NCBP3Q53F19 620 aaKnown RBP11.9□□□□□ -0.5
ATP5C1-208ENST00000473809 CAPN15O75808 1086 aa11.71□□□□□ -0.53
ATP5C1-208ENST00000473809 DSG3P32926 999 aa11.61□□□□□ -0.55
ATP5C1-208ENST00000473809 NPM3O75607 178 aaKnown RBP11.57□□□□□ -0.56
ATP5C1-208ENST00000473809 U3KPZ7 1027 aaPredicted RBP11.55□□□□□ -0.56
ATP5C1-208ENST00000473809 SPINK5Q9NQ38 1064 aaPredicted RBP11.53□□□□□ -0.56
ATP5C1-208ENST00000473809 APLP2Q06481 763 aa11.49□□□□□ -0.57
ATP5C1-208ENST00000473809 TRHP20396 242 aaPredicted RBP11.37□□□□□ -0.59
ATP5C1-208ENST00000473809 ZNF219Q9P2Y4 722 aaPredicted RBP11.37□□□□□ -0.59
ATP5C1-208ENST00000473809 EHMT2Q96KQ7 1210 aa11.35□□□□□ -0.59
ATP5C1-208ENST00000473809 SLC4A1APQ9BWU0 796 aaKnown RBP11.33□□□□□ -0.6
ATP5C1-208ENST00000473809 ABCB7O75027 752 aa11.3□□□□□ -0.6
ATP5C1-208ENST00000473809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.29□□□□□ -0.6
ATP5C1-208ENST00000473809 HNRNPUL2Q1KMD3 747 aaKnown RBP11.29□□□□□ -0.6
ATP5C1-208ENST00000473809 RBM42Q9BTD8 480 aaKnown RBP11.28□□□□□ -0.6
ATP5C1-208ENST00000473809 CSRNP3Q8WYN3 585 aa11.2□□□□□ -0.62
ATP5C1-208ENST00000473809 SAMD1Q6SPF0 538 aaPredicted RBP11.14□□□□□ -0.63
ATP5C1-208ENST00000473809 CHRDL2Q6WN34 429 aa11.13□□□□□ -0.63
ATP5C1-208ENST00000473809 ZBTB22O15209 634 aa11.08□□□□□ -0.64
ATP5C1-208ENST00000473809 SLC4A2P04920 1241 aa11.06□□□□□ -0.64
ATP5C1-208ENST00000473809 SP7Q8TDD2 431 aaPredicted RBP10.98□□□□□ -0.65
ATP5C1-208ENST00000473809 POLA2Q14181 598 aa10.9□□□□□ -0.66
ATP5C1-208ENST00000473809 AKT1S1Q96B36 256 aa10.83□□□□□ -0.68
ATP5C1-208ENST00000473809 FOXD4L1Q9NU39 408 aa10.81□□□□□ -0.68
ATP5C1-208ENST00000473809 ZBTB12Q9Y330 459 aaPredicted RBP10.78□□□□□ -0.68
ATP5C1-208ENST00000473809 HAX1O00165 279 aa10.77□□□□□ -0.69
ATP5C1-208ENST00000473809 MYCNP04198 464 aaPredicted RBP10.77□□□□□ -0.69
ATP5C1-208ENST00000473809 PIP4P2Q8N4L2 257 aa10.7□□□□□ -0.7
ATP5C1-208ENST00000473809 REM2Q8IYK8 340 aaPredicted RBP10.68□□□□□ -0.7
ATP5C1-208ENST00000473809 PITPNM1O00562 1244 aa10.55□□□□□ -0.72
ATP5C1-208ENST00000473809 OSCARQ8IYS5 282 aa10.55□□□□□ -0.72
ATP5C1-208ENST00000473809 FXR2P51116 673 aaKnown RBP eCLIP10.54□□□□□ -0.72
ATP5C1-208ENST00000473809 ATF5Q9Y2D1 282 aaPredicted RBP10.43□□□□□ -0.74
ATP5C1-208ENST00000473809 ATXN8OSP0DMR3 200 aa10.4□□□□□ -0.74
ATP5C1-208ENST00000473809 EVX2Q03828 476 aa10.35□□□□□ -0.75
ATP5C1-208ENST00000473809 PRKAR2AP13861 404 aaKnown RBP10.33□□□□□ -0.76
ATP5C1-208ENST00000473809 CLEC11AQ9Y240 323 aa10.32□□□□□ -0.76
ATP5C1-208ENST00000473809 SPDYE2BA6NHP3 402 aa10.31□□□□□ -0.76
ATP5C1-208ENST00000473809 SPDYE6P0CI01 402 aa10.31□□□□□ -0.76
ATP5C1-208ENST00000473809 SPDYE2Q495Y8 402 aa10.31□□□□□ -0.76
ATP5C1-208ENST00000473809 LHX8Q68G74 356 aa10.31□□□□□ -0.76
ATP5C1-208ENST00000473809 FBLN2P98095 1184 aa10.3□□□□□ -0.76
ATP5C1-208ENST00000473809 SPDYE1Q8NFV5 336 aaPredicted RBP10.3□□□□□ -0.76
ATP5C1-208ENST00000473809 C19orf67A6NJJ6 358 aa10.23□□□□□ -0.77
ATP5C1-208ENST00000473809 GABBR2O75899 941 aa10.22□□□□□ -0.77
ATP5C1-208ENST00000473809 PLSCR2Q9NRY7 297 aa10.17□□□□□ -0.78
ATP5C1-208ENST00000473809 ZNF692Q9BU19 519 aaPredicted RBP10.13□□□□□ -0.79
ATP5C1-208ENST00000473809 PRR29P0C7W0 189 aa10.08□□□□□ -0.8
ATP5C1-208ENST00000473809 CLCN6P51797 869 aa10.06□□□□□ -0.8
ATP5C1-208ENST00000473809 CHADLQ6NUI6 762 aa10.05□□□□□ -0.8
ATP5C1-208ENST00000473809 SSUH2Q9Y2M2 353 aa10.01□□□□□ -0.81
ATP5C1-208ENST00000473809 CD44P16070 742 aaKnown RBP10□□□□□ -0.81
ATP5C1-208ENST00000473809 FKBP8Q14318 412 aa10□□□□□ -0.81
ATP5C1-208ENST00000473809 DCBLD2Q96PD2 775 aa10□□□□□ -0.81
ATP5C1-208ENST00000473809 MKRN4PQ13434 485 aaPredicted RBP9.97□□□□□ -0.81
ATP5C1-208ENST00000473809 PABPN1Q86U42 306 aaKnown RBP eCLIP9.92□□□□□ -0.82
ATP5C1-208ENST00000473809 FARP1Q9Y4F1 1045 aaPredicted RBP9.89□□□□□ -0.83
ATP5C1-208ENST00000473809 POTEIP0CG38 1075 aa9.88□□□□□ -0.83
ATP5C1-208ENST00000473809 ZRANB1Q9UGI0 708 aa9.79□□□□□ -0.84
ATP5C1-208ENST00000473809 ZNF579Q8NAF0 562 aaKnown RBP9.76□□□□□ -0.85
ATP5C1-208ENST00000473809 PAK3O75914 559 aaPredicted RBP9.75□□□□□ -0.85
ATP5C1-208ENST00000473809 POTEMA6NI47 508 aa9.74□□□□□ -0.85
ATP5C1-208ENST00000473809 PROM2Q8N271 834 aa9.7□□□□□ -0.86
ATP5C1-208ENST00000473809 PCDH10Q9P2E7 1040 aa9.7□□□□□ -0.86
ATP5C1-208ENST00000473809 SPDYE4A6NLX3 237 aa9.69□□□□□ -0.86
ATP5C1-208ENST00000473809 POTEGQ6S5H5 508 aa9.69□□□□□ -0.86
ATP5C1-208ENST00000473809 RTN4Q9NQC3 1192 aaKnown RBP9.69□□□□□ -0.86
ATP5C1-208ENST00000473809 OTUD5Q96G74 571 aa9.68□□□□□ -0.86
ATP5C1-208ENST00000473809 STAG3Q9UJ98 1225 aa9.66□□□□□ -0.86
ATP5C1-208ENST00000473809 GALR2O43603 387 aaPredicted RBP9.64□□□□□ -0.87
ATP5C1-208ENST00000473809 MAMSTRQ6ZN01 415 aa9.59□□□□□ -0.87
ATP5C1-208ENST00000473809 NPM1P06748 294 aaKnown RBP eCLIP9.57□□□□□ -0.88
ATP5C1-208ENST00000473809 AMER1Q5JTC6 1135 aaPredicted RBP9.57□□□□□ -0.88
ATP5C1-208ENST00000473809 CREBZFQ9NS37 354 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms