Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 SUN4YNL066W 1263 nt8.5□□□□□ -1.05
RPT4P53549 AIM20YIL158W 615 nt8.49□□□□□ -1.05
RPT4P53549 MET13YGL125W 1803 nt8.48□□□□□ -1.05
RPT4P53549 YDR510C-AYDR510C-A 117 nt8.48□□□□□ -1.05
RPT4P53549 RTC4YNL254C 1206 nt8.48□□□□□ -1.05
RPT4P53549 URA8YJR103W 1737 nt8.48□□□□□ -1.05
RPT4P53549 CIT2YCR005C 1383 nt8.48□□□□□ -1.05
RPT4P53549 YJL163CYJL163C 1668 nt8.47□□□□□ -1.05
RPT4P53549 YIL177CYIL177C 5277 nt8.47□□□□□ -1.05
RPT4P53549 tD(GUC)BtD(GUC)B 72 nt8.47□□□□□ -1.05
RPT4P53549 tD(GUC)DtD(GUC)D 72 nt8.47□□□□□ -1.05
RPT4P53549 tD(GUC)G1tD(GUC)G1 72 nt8.47□□□□□ -1.05
RPT4P53549 tD(GUC)G2tD(GUC)G2 72 nt8.47□□□□□ -1.05
RPT4P53549 tD(GUC)I1tD(GUC)I1 72 nt8.47□□□□□ -1.05
RPT4P53549 tD(GUC)I2tD(GUC)I2 72 nt8.47□□□□□ -1.05
RPT4P53549 tD(GUC)J1tD(GUC)J1 72 nt8.47□□□□□ -1.05
RPT4P53549 tD(GUC)J2tD(GUC)J2 72 nt8.47□□□□□ -1.05
RPT4P53549 tD(GUC)J3tD(GUC)J3 72 nt8.47□□□□□ -1.05
RPT4P53549 tD(GUC)J4tD(GUC)J4 72 nt8.47□□□□□ -1.05
RPT4P53549 tD(GUC)KtD(GUC)K 72 nt8.47□□□□□ -1.05
RPT4P53549 tD(GUC)L1tD(GUC)L1 72 nt8.47□□□□□ -1.05
RPT4P53549 tD(GUC)L2tD(GUC)L2 72 nt8.47□□□□□ -1.05
RPT4P53549 tD(GUC)MtD(GUC)M 72 nt8.47□□□□□ -1.05
RPT4P53549 tD(GUC)OtD(GUC)O 72 nt8.47□□□□□ -1.05
RPT4P53549 YLR184WYLR184W 348 nt8.47□□□□□ -1.05
RPT4P53549 YNR001W-AYNR001W-A 219 nt8.47□□□□□ -1.05
RPT4P53549 MAE1YKL029C 2010 nt8.47□□□□□ -1.05
RPT4P53549 OPI7YDR360W 435 nt8.46□□□□□ -1.06
RPT4P53549 PET10YKR046C 852 nt8.46□□□□□ -1.06
RPT4P53549 YMR074CYMR074C 438 nt8.46□□□□□ -1.06
RPT4P53549 YHL008CYHL008C 1884 nt8.46□□□□□ -1.06
RPT4P53549 TUB1YML085C 1344 nt8.46□□□□□ -1.06
RPT4P53549 CIA1YDR267C 993 nt8.45□□□□□ -1.06
RPT4P53549 PMT1YDL095W 2454 nt8.44□□□□□ -1.06
RPT4P53549 GET4YOR164C 939 nt8.44□□□□□ -1.06
RPT4P53549 ERR3YMR323W 1314 nt8.44□□□□□ -1.06
RPT4P53549 GAL2YLR081W 1725 nt8.43□□□□□ -1.06
RPT4P53549 LIA1YJR070C 978 nt8.43□□□□□ -1.06
RPT4P53549 HOC1YJR075W 1191 nt8.43□□□□□ -1.06
RPT4P53549 AVL9YLR114C 2295 nt8.43□□□□□ -1.06
RPT4P53549 COX15YER141W 1461 nt8.43□□□□□ -1.06
RPT4P53549 SSC1YJR045C 1965 nt8.42□□□□□ -1.06
RPT4P53549 CAR2YLR438W 1275 nt8.42□□□□□ -1.06
RPT4P53549 YKL153WYKL153W 510 nt8.4□□□□□ -1.06
RPT4P53549 SCS22YBL091C-A 528 nt8.4□□□□□ -1.06
RPT4P53549 ORT1YOR130C 879 nt8.4□□□□□ -1.06
RPT4P53549 MPE1YKL059C 1326 nt8.39□□□□□ -1.07
RPT4P53549 GPD1YDL022W 1176 nt8.39□□□□□ -1.07
RPT4P53549 RPL2AYFR031C-A 765 nt8.39□□□□□ -1.07
RPT4P53549 CKB1YGL019W 837 nt8.39□□□□□ -1.07
RPT4P53549 MAS1YLR163C 1389 nt8.38□□□□□ -1.07
RPT4P53549 PLB2YMR006C 2121 nt8.38□□□□□ -1.07
RPT4P53549 FIT2YOR382W 462 nt8.38□□□□□ -1.07
RPT4P53549 YPR076WYPR076W 375 nt8.38□□□□□ -1.07
RPT4P53549 TOK1YJL093C 2076 nt8.38□□□□□ -1.07
RPT4P53549 MDH1YKL085W 1005 nt8.37□□□□□ -1.07
RPT4P53549 MRPL19YNL185C 477 nt8.37□□□□□ -1.07
RPT4P53549 RCF2YNR018W 675 nt8.37□□□□□ -1.07
RPT4P53549 HTZ1YOL012C 405 nt8.37□□□□□ -1.07
RPT4P53549 YPL136WYPL136W 369 nt8.37□□□□□ -1.07
RPT4P53549 MRPL35YDR322W 1104 nt8.36□□□□□ -1.07
RPT4P53549 AGX1YFL030W 1158 nt8.36□□□□□ -1.07
RPT4P53549 AVO2YMR068W 1281 nt8.36□□□□□ -1.07
RPT4P53549 HEM14YER014W 1620 nt8.36□□□□□ -1.07
RPT4P53549 HBS1YKR084C 1836 nt8.36□□□□□ -1.07
RPT4P53549 PET117YER058W 324 nt8.35□□□□□ -1.07
RPT4P53549 APE4YHR113W 1473 nt8.34□□□□□ -1.07
RPT4P53549 PPH21YDL134C 1110 nt8.34□□□□□ -1.07
RPT4P53549 MIM1YOL026C 342 nt8.34□□□□□ -1.07
RPT4P53549 DMC1YER179W 1005 nt8.33□□□□□ -1.08
RPT4P53549 YIL029W-AYIL029W-A 372 nt8.33□□□□□ -1.08
RPT4P53549 IMD1YAR073W 1212 nt8.33□□□□□ -1.08
RPT4P53549 PDC5YLR134W 1692 nt8.33□□□□□ -1.08
RPT4P53549 LEO1YOR123C 1395 nt8.33□□□□□ -1.08
RPT4P53549 FMP40YPL222W 2067 nt8.33□□□□□ -1.08
RPT4P53549 PAB1YER165W 1734 nt8.32□□□□□ -1.08
RPT4P53549 SNA3YJL151C 402 nt8.31□□□□□ -1.08
RPT4P53549 DUR3YHL016C 2208 nt8.31□□□□□ -1.08
RPT4P53549 TOP3YLR234W 1971 nt8.31□□□□□ -1.08
RPT4P53549 MCM5YLR274W 2328 nt8.3□□□□□ -1.08
RPT4P53549 BRN1YBL097W 2265 nt8.3□□□□□ -1.08
RPT4P53549 YHR218W-AYHR218W-A 318 nt8.3□□□□□ -1.08
RPT4P53549 RPL2BYIL018W 765 nt8.3□□□□□ -1.08
RPT4P53549 SNF7YLR025W 723 nt8.3□□□□□ -1.08
RPT4P53549 YNR005CYNR005C 405 nt8.3□□□□□ -1.08
RPT4P53549 YBL112CYBL112C 318 nt8.3□□□□□ -1.08
RPT4P53549 YAH1YPL252C 519 nt8.3□□□□□ -1.08
RPT4P53549 ASR1YPR093C 867 nt8.3□□□□□ -1.08
RPT4P53549 DIA4YHR011W 1341 nt8.29□□□□□ -1.08
RPT4P53549 CRH1YGR189C 1524 nt8.29□□□□□ -1.08
RPT4P53549 ILV6YCL009C 930 nt8.29□□□□□ -1.08
RPT4P53549 RBS1YDL189W 1374 nt8.29□□□□□ -1.08
RPT4P53549 AFG3YER017C 2286 nt8.28□□□□□ -1.08
RPT4P53549 ADE16YLR028C 1776 nt8.28□□□□□ -1.08
RPT4P53549 LCL3YGL085W 825 nt8.28□□□□□ -1.08
RPT4P53549 snR4snR4 186 nt8.27□□□□□ -1.09
RPT4P53549 SUF3tG(CCC)D 72 nt8.26□□□□□ -1.09
RPT4P53549 IMG1YCR046C 510 nt8.25□□□□□ -1.09
RPT4P53549 ERG24YNL280C 1317 nt8.25□□□□□ -1.09
RPT4P53549 RDR1YOR380W 1641 nt8.25□□□□□ -1.09
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms