Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 CHS7YHR142W 951 nt7.34□□□□□ -1.23
TDA11P38854 AIM2YAL049C 741 nt7.34□□□□□ -1.23
TDA11P38854 ADH6YMR318C 1083 nt7.34□□□□□ -1.23
TDA11P38854 MET22YOL064C 1074 nt7.34□□□□□ -1.23
TDA11P38854 OLA1YBR025C 1185 nt7.34□□□□□ -1.23
TDA11P38854 RTC2YBR147W 891 nt7.34□□□□□ -1.23
TDA11P38854 AGP2YBR132C 1791 nt7.33□□□□□ -1.24
TDA11P38854 PUP3YER094C 618 nt7.33□□□□□ -1.24
TDA11P38854 SHC1YER096W 1539 nt7.32□□□□□ -1.24
TDA11P38854 YMR166CYMR166C 1107 nt7.32□□□□□ -1.24
TDA11P38854 YOR268CYOR268C 399 nt7.32□□□□□ -1.24
TDA11P38854 PDC6YGR087C 1692 nt7.32□□□□□ -1.24
TDA11P38854 YGL260WYGL260W 231 nt7.31□□□□□ -1.24
TDA11P38854 PRY2YKR013W 990 nt7.31□□□□□ -1.24
TDA11P38854 YLR112WYLR112W 420 nt7.31□□□□□ -1.24
TDA11P38854 VTS1YOR359W 1572 nt7.3□□□□□ -1.24
TDA11P38854 YER156CYER156C 1017 nt7.3□□□□□ -1.24
TDA11P38854 DST1YGL043W 930 nt7.3□□□□□ -1.24
TDA11P38854 ERV25YML012W 636 nt7.3□□□□□ -1.24
TDA11P38854 RHO1YPR165W 630 nt7.3□□□□□ -1.24
TDA11P38854 NUP57YGR119C 1626 nt7.3□□□□□ -1.24
TDA11P38854 CAR2YLR438W 1275 nt7.29□□□□□ -1.24
TDA11P38854 GDH1YOR375C 1365 nt7.29□□□□□ -1.24
TDA11P38854 ADA2YDR448W 1305 nt7.28□□□□□ -1.24
TDA11P38854 PET18YCR020C 648 nt7.28□□□□□ -1.24
TDA11P38854 YHR033WYHR033W 1272 nt7.28□□□□□ -1.24
TDA11P38854 YKL147CYKL147C 618 nt7.28□□□□□ -1.24
TDA11P38854 RRN10YBL025W 438 nt7.28□□□□□ -1.24
TDA11P38854 MFG1YDL233W 1377 nt7.28□□□□□ -1.24
TDA11P38854 SKY1YMR216C 2229 nt7.27□□□□□ -1.25
TDA11P38854 RSP5YER125W 2430 nt7.27□□□□□ -1.25
TDA11P38854 YDR215CYDR215C 414 nt7.27□□□□□ -1.25
TDA11P38854 RRT14YIL127C 621 nt7.27□□□□□ -1.25
TDA11P38854 THI73YLR004C 1572 nt7.27□□□□□ -1.25
TDA11P38854 LIP5YOR196C 1245 nt7.26□□□□□ -1.25
TDA11P38854 LSP1YPL004C 1026 nt7.26□□□□□ -1.25
TDA11P38854 EXG2YDR261C 1689 nt7.25□□□□□ -1.25
TDA11P38854 tL(UAA)B1tL(UAA)B1 84 nt7.25□□□□□ -1.25
TDA11P38854 tL(UAA)B2tL(UAA)B2 84 nt7.25□□□□□ -1.25
TDA11P38854 tL(UAA)DtL(UAA)D 84 nt7.25□□□□□ -1.25
TDA11P38854 SUP51tL(UAA)J 84 nt7.25□□□□□ -1.25
TDA11P38854 tL(UAA)KtL(UAA)K 84 nt7.25□□□□□ -1.25
TDA11P38854 tL(UAA)LtL(UAA)L 84 nt7.25□□□□□ -1.25
TDA11P38854 tL(UAA)NtL(UAA)N 84 nt7.25□□□□□ -1.25
TDA11P38854 TAD2YJL035C 753 nt7.25□□□□□ -1.25
TDA11P38854 SMK1YPR054W 1167 nt7.25□□□□□ -1.25
TDA11P38854 CDC3YLR314C 1563 nt7.25□□□□□ -1.25
TDA11P38854 YDR327WYDR327W 327 nt7.24□□□□□ -1.25
TDA11P38854 ERG12YMR208W 1332 nt7.24□□□□□ -1.25
TDA11P38854 ECM30YLR436C 3825 nt7.23□□□□□ -1.25
TDA11P38854 MNN9YPL050C 1188 nt7.23□□□□□ -1.25
TDA11P38854 YAH1YPL252C 519 nt7.23□□□□□ -1.25
TDA11P38854 AFG3YER017C 2286 nt7.23□□□□□ -1.25
TDA11P38854 OCH1YGL038C 1443 nt7.22□□□□□ -1.25
TDA11P38854 CAK1YFL029C 1107 nt7.22□□□□□ -1.25
TDA11P38854 MFT1YML062C 1179 nt7.22□□□□□ -1.25
TDA11P38854 SNU66YOR308C 1764 nt7.22□□□□□ -1.25
TDA11P38854 UTR5YEL035C 501 nt7.21□□□□□ -1.26
TDA11P38854 CYB2YML054C 1776 nt7.2□□□□□ -1.26
TDA11P38854 EMP65YER140W 1671 nt7.2□□□□□ -1.26
TDA11P38854 GPH1YPR160W 2709 nt7.2□□□□□ -1.26
TDA11P38854 NTG1YAL015C 1200 nt7.2□□□□□ -1.26
TDA11P38854 BXI1YNL305C 894 nt7.2□□□□□ -1.26
TDA11P38854 CLN1YMR199W 1641 nt7.19□□□□□ -1.26
TDA11P38854 YCR061WYCR061W 1896 nt7.19□□□□□ -1.26
TDA11P38854 ELP4YPL101W 1371 nt7.19□□□□□ -1.26
TDA11P38854 YPC1YBR183W 951 nt7.18□□□□□ -1.26
TDA11P38854 ARG7YMR062C 1326 nt7.18□□□□□ -1.26
TDA11P38854 MCH2YKL221W 1422 nt7.18□□□□□ -1.26
TDA11P38854 GSH1YJL101C 2037 nt7.17□□□□□ -1.26
TDA11P38854 BAP3YDR046C 1815 nt7.16□□□□□ -1.26
TDA11P38854 ADE1YAR015W 921 nt7.16□□□□□ -1.26
TDA11P38854 YMR206WYMR206W 942 nt7.16□□□□□ -1.26
TDA11P38854 PRE10YOR362C 867 nt7.16□□□□□ -1.26
TDA11P38854 Q0010Q0010 387 nt7.16□□□□□ -1.26
TDA11P38854 PUS7YOR243C 2031 nt7.16□□□□□ -1.26
TDA11P38854 TIM50YPL063W 1431 nt7.16□□□□□ -1.26
TDA11P38854 ATP2YJR121W 1536 nt7.16□□□□□ -1.26
TDA11P38854 ARC35YNR035C 1029 nt7.15□□□□□ -1.26
TDA11P38854 YLL066CYLL066C 3618 nt7.15□□□□□ -1.27
TDA11P38854 DAL80YKR034W 810 nt7.14□□□□□ -1.27
TDA11P38854 FUS3YBL016W 1062 nt7.14□□□□□ -1.27
TDA11P38854 CMK2YOL016C 1344 nt7.12□□□□□ -1.27
TDA11P38854 YJL045WYJL045W 1905 nt7.12□□□□□ -1.27
TDA11P38854 CPR2YHR057C 618 nt7.12□□□□□ -1.27
TDA11P38854 KAE1YKR038C 1161 nt7.12□□□□□ -1.27
TDA11P38854 RPS6AYPL090C 711 nt7.12□□□□□ -1.27
TDA11P38854 RPS6BYBR181C 711 nt7.12□□□□□ -1.27
TDA11P38854 YPR084WYPR084W 1371 nt7.11□□□□□ -1.27
TDA11P38854 ERG24YNL280C 1317 nt7.11□□□□□ -1.27
TDA11P38854 MTR3YGR158C 753 nt7.11□□□□□ -1.27
TDA11P38854 RPL2BYIL018W 765 nt7.11□□□□□ -1.27
TDA11P38854 SNT309YPR101W 528 nt7.11□□□□□ -1.27
TDA11P38854 ECM38YLR299W 1983 nt7.11□□□□□ -1.27
TDA11P38854 NUP53YMR153W 1428 nt7.1□□□□□ -1.27
TDA11P38854 HOG1YLR113W 1308 nt7.1□□□□□ -1.27
TDA11P38854 TAH11YJR046W 1815 nt7.1□□□□□ -1.27
TDA11P38854 BDF2YDL070W 1917 nt7.09□□□□□ -1.27
TDA11P38854 TDH1YJL052W 999 nt7.09□□□□□ -1.27
TDA11P38854 GLN3YER040W 2193 nt7.09□□□□□ -1.27
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms