Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 DAL2YIR029W 1032 nt7.26□□□□□ -1.25
PUB1P32588 CTK2YJL006C 972 nt7.26□□□□□ -1.25
PUB1P32588 YLR285C-AYLR285C-A 171 nt7.26□□□□□ -1.25 RIP-Chip
PUB1P32588 YNL140CYNL140C 570 nt7.26□□□□□ -1.25
PUB1P32588 TSR3YOR006C 942 nt7.26□□□□□ -1.25
PUB1P32588 RAD17YOR368W 1206 nt7.26□□□□□ -1.25
PUB1P32588 RSC4YKR008W 1878 nt7.26□□□□□ -1.25 RIP-Chip
PUB1P32588 CLB5YPR120C 1308 nt7.26□□□□□ -1.25 RIP-Chip
PUB1P32588 BUD31YCR063W 474 nt7.25□□□□□ -1.25 RIP-Chip
PUB1P32588 IGD1YFR017C 588 nt7.25□□□□□ -1.25 RIP-Chip
PUB1P32588 CDD1YLR245C 429 nt7.25□□□□□ -1.25 RIP-Chip
PUB1P32588 YLR412C-AYLR412C-A 207 nt7.25□□□□□ -1.25
PUB1P32588 RRP40YOL142W 723 nt7.25□□□□□ -1.25
PUB1P32588 ARR1YPR199C 885 nt7.25□□□□□ -1.25 RIP-Chip
PUB1P32588 NUP57YGR119C 1626 nt7.25□□□□□ -1.25
PUB1P32588 GTB1YDR221W 2109 nt7.25□□□□□ -1.25
PUB1P32588 HSV2YGR223C 1347 nt7.25□□□□□ -1.25
PUB1P32588 YRF1-1YDR545W 5391 nt7.24□□□□□ -1.25
PUB1P32588 YRF1-5YLR467W 5391 nt7.24□□□□□ -1.25
PUB1P32588 YRF1-8YOR396W 5391 nt7.24□□□□□ -1.25
PUB1P32588 HMRA1YCR097W 381 nt7.24□□□□□ -1.25
PUB1P32588 JJJ3YJR097W 519 nt7.24□□□□□ -1.25
PUB1P32588 MGR3YMR115W 1506 nt7.23□□□□□ -1.25
PUB1P32588 YOL038C-AYOL038C-A 96 nt7.23□□□□□ -1.25
PUB1P32588 ENO1YGR254W 1314 nt7.23□□□□□ -1.25
PUB1P32588 GLY1YEL046C 1164 nt7.22□□□□□ -1.25 RIP-Chip
PUB1P32588 PHB2YGR231C 933 nt7.22□□□□□ -1.25
PUB1P32588 INM1YHR046C 888 nt7.22□□□□□ -1.25
PUB1P32588 MAD2YJL030W 591 nt7.22□□□□□ -1.25
PUB1P32588 ADH3YMR083W 1128 nt7.22□□□□□ -1.25
PUB1P32588 YAP7YOL028C 738 nt7.22□□□□□ -1.25
PUB1P32588 TGL5YOR081C 2250 nt7.21□□□□□ -1.25 RIP-Chip
PUB1P32588 YFR020WYFR020W 699 nt7.21□□□□□ -1.26 RIP-Chip
PUB1P32588 ILV2YMR108W 2064 nt7.21□□□□□ -1.26 RIP-Chip
PUB1P32588 MRN1YPL184C 1839 nt7.2□□□□□ -1.26 RIP-Chip
PUB1P32588 SLM3YDL033C 1254 nt7.2□□□□□ -1.26 RIP-Chip
PUB1P32588 EDC1YGL222C 528 nt7.2□□□□□ -1.26 RIP-Chip
PUB1P32588 SKI6YGR195W 741 nt7.2□□□□□ -1.26
PUB1P32588 MOB1YIL106W 945 nt7.2□□□□□ -1.26
PUB1P32588 TDA4YJR116W 840 nt7.2□□□□□ -1.26 RIP-Chip
PUB1P32588 RIB1YBL033C 1038 nt7.2□□□□□ -1.26
PUB1P32588 YDR008CYDR008C 351 nt7.19□□□□□ -1.26
PUB1P32588 RPF2YKR081C 1035 nt7.19□□□□□ -1.26
PUB1P32588 OMA1YKR087C 1038 nt7.19□□□□□ -1.26 RIP-Chip
PUB1P32588 ERG6YML008C 1152 nt7.19□□□□□ -1.26
PUB1P32588 MRPL24YMR193W 777 nt7.19□□□□□ -1.26
PUB1P32588 BTS1YPL069C 1008 nt7.19□□□□□ -1.26
PUB1P32588 RRP15YPR143W 753 nt7.19□□□□□ -1.26
PUB1P32588 RFC1YOR217W 2586 nt7.18□□□□□ -1.26
PUB1P32588 tA(AGC)DtA(AGC)D 73 nt7.18□□□□□ -1.26
PUB1P32588 tA(AGC)FtA(AGC)F 73 nt7.18□□□□□ -1.26
PUB1P32588 tA(AGC)GtA(AGC)G 73 nt7.18□□□□□ -1.26
PUB1P32588 tA(AGC)HtA(AGC)H 73 nt7.18□□□□□ -1.26
PUB1P32588 tA(AGC)JtA(AGC)J 73 nt7.18□□□□□ -1.26
PUB1P32588 tA(AGC)K1tA(AGC)K1 73 nt7.18□□□□□ -1.26
PUB1P32588 tA(AGC)K2tA(AGC)K2 73 nt7.18□□□□□ -1.26
PUB1P32588 tA(AGC)LtA(AGC)L 73 nt7.18□□□□□ -1.26
PUB1P32588 tA(AGC)M1tA(AGC)M1 73 nt7.18□□□□□ -1.26
PUB1P32588 tA(AGC)M2tA(AGC)M2 73 nt7.18□□□□□ -1.26
PUB1P32588 tA(AGC)PtA(AGC)P 73 nt7.18□□□□□ -1.26
PUB1P32588 TRP4YDR354W 1143 nt7.18□□□□□ -1.26 RIP-Chip
PUB1P32588 COS6YGR295C 1146 nt7.18□□□□□ -1.26 RIP-Chip
PUB1P32588 PMT7YDR307W 1989 nt7.18□□□□□ -1.26
PUB1P32588 LRO1YNR008W 1986 nt7.17□□□□□ -1.26
PUB1P32588 SOD2YHR008C 702 nt7.17□□□□□ -1.26 RIP-Chip
PUB1P32588 YIA6YIL006W 1122 nt7.17□□□□□ -1.26
PUB1P32588 ERV41YML067C 1059 nt7.17□□□□□ -1.26
PUB1P32588 TGS1YPL157W 948 nt7.17□□□□□ -1.26
PUB1P32588 IPL1YPL209C 1104 nt7.17□□□□□ -1.26
PUB1P32588 NPL6YMR091C 1308 nt7.17□□□□□ -1.26
PUB1P32588 DIP5YPL265W 1827 nt7.16□□□□□ -1.26 RIP-Chip
PUB1P32588 YCP4YCR004C 744 nt7.16□□□□□ -1.26
PUB1P32588 CHS7YHR142W 951 nt7.16□□□□□ -1.26 RIP-Chip
PUB1P32588 SLM4YBR077C 489 nt7.16□□□□□ -1.26 RIP-Chip
PUB1P32588 LPD1YFL018C 1500 nt7.16□□□□□ -1.26
PUB1P32588 YEA4YEL004W 1029 nt7.15□□□□□ -1.26
PUB1P32588 YEL034C-AYEL034C-A 603 nt7.15□□□□□ -1.26
PUB1P32588 RPL2AYFR031C-A 765 nt7.15□□□□□ -1.26
PUB1P32588 ADD66YKL206C 804 nt7.15□□□□□ -1.26
PUB1P32588 RCF1YML030W 480 nt7.15□□□□□ -1.26
PUB1P32588 IDP3YNL009W 1263 nt7.15□□□□□ -1.26 RIP-Chip
PUB1P32588 PCL1YNL289W 840 nt7.15□□□□□ -1.26
PUB1P32588 DCP1YOL149W 696 nt7.15□□□□□ -1.26
PUB1P32588 OLA1YBR025C 1185 nt7.15□□□□□ -1.26
PUB1P32588 EHT1YBR177C 1356 nt7.15□□□□□ -1.26 RIP-Chip
PUB1P32588 SAM50YNL026W 1455 nt7.15□□□□□ -1.27
PUB1P32588 YCR025CYCR025C 411 nt7.14□□□□□ -1.27
PUB1P32588 RRP17YDR412W 708 nt7.14□□□□□ -1.27
PUB1P32588 BRL1YHR036W 1416 nt7.14□□□□□ -1.27
PUB1P32588 YKR015CYKR015C 1707 nt7.14□□□□□ -1.27
PUB1P32588 DTR1YBR180W 1719 nt7.14□□□□□ -1.27
PUB1P32588 ATG22YCL038C 1587 nt7.13□□□□□ -1.27 RIP-Chip
PUB1P32588 KTR4YBR199W 1395 nt7.13□□□□□ -1.27
PUB1P32588 OCA4YCR095C 1089 nt7.13□□□□□ -1.27
PUB1P32588 YGR137WYGR137W 375 nt7.13□□□□□ -1.27
PUB1P32588 MRPS8YMR158W 468 nt7.13□□□□□ -1.27
PUB1P32588 MRP7YNL005C 1116 nt7.13□□□□□ -1.27
PUB1P32588 ATG29YPL166W 642 nt7.13□□□□□ -1.27 RIP-Chip
PUB1P32588 WSC3YOL105C 1671 nt7.12□□□□□ -1.27 RIP-Chip
PUB1P32588 UBC5YDR059C 447 nt7.12□□□□□ -1.27 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms