Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LMO1P25800 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LMO1P25800 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
LMO1P25800 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
LMO1P25800 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
LMO1P25800 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
LMO1P25800 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
LMO1P25800 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LMO1P25800 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LMO1P25800 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LMO1P25800 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LMO1P25800 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LMO1P25800 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LMO1P25800 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.11■□□□□ 0.97
LMO1P25800 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LMO1P25800 AC110285.7-201ENST00000624417 1536 ntBASIC21.1■□□□□ 0.97
LMO1P25800 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LMO1P25800 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.1■□□□□ 0.97
LMO1P25800 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LMO1P25800 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LMO1P25800 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.1■□□□□ 0.97
LMO1P25800 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.1■□□□□ 0.97
LMO1P25800 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
LMO1P25800 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LMO1P25800 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LMO1P25800 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.09■□□□□ 0.97
LMO1P25800 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
LMO1P25800 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LMO1P25800 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
LMO1P25800 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LMO1P25800 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.08■□□□□ 0.97
LMO1P25800 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.08■□□□□ 0.97
LMO1P25800 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.07■□□□□ 0.96
LMO1P25800 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LMO1P25800 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LMO1P25800 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
LMO1P25800 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LMO1P25800 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.07■□□□□ 0.96
LMO1P25800 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.07■□□□□ 0.96
LMO1P25800 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LMO1P25800 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
LMO1P25800 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LMO1P25800 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LMO1P25800 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LMO1P25800 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LMO1P25800 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LMO1P25800 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LMO1P25800 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LMO1P25800 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.05■□□□□ 0.96
LMO1P25800 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LMO1P25800 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
LMO1P25800 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
LMO1P25800 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LMO1P25800 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LMO1P25800 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LMO1P25800 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LMO1P25800 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.04■□□□□ 0.96
LMO1P25800 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LMO1P25800 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
LMO1P25800 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LMO1P25800 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.03■□□□□ 0.96
LMO1P25800 LINC01971-201ENST00000617888 1048 ntBASIC21.03■□□□□ 0.96
LMO1P25800 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.02■□□□□ 0.96
LMO1P25800 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LMO1P25800 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
LMO1P25800 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LMO1P25800 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LMO1P25800 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.02■□□□□ 0.96
LMO1P25800 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
LMO1P25800 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LMO1P25800 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LMO1P25800 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.01■□□□□ 0.95
LMO1P25800 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LMO1P25800 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LMO1P25800 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LMO1P25800 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
LMO1P25800 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21■□□□□ 0.95
LMO1P25800 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21■□□□□ 0.95
LMO1P25800 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21■□□□□ 0.95
LMO1P25800 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21■□□□□ 0.95
LMO1P25800 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LMO1P25800 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
LMO1P25800 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LMO1P25800 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LMO1P25800 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LMO1P25800 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.98■□□□□ 0.95
LMO1P25800 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LMO1P25800 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LMO1P25800 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.98■□□□□ 0.95
LMO1P25800 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.98■□□□□ 0.95
LMO1P25800 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LMO1P25800 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.97■□□□□ 0.95
LMO1P25800 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.97■□□□□ 0.95
LMO1P25800 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LMO1P25800 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.97■□□□□ 0.95
LMO1P25800 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LMO1P25800 DUX4L13-201ENST00000554103 1267 ntBASIC20.96■□□□□ 0.95
LMO1P25800 DUX4L15-201ENST00000611059 1267 ntBASIC20.96■□□□□ 0.95
LMO1P25800 DUX4L23-201ENST00000615195 1269 ntBASIC20.96■□□□□ 0.95
LMO1P25800 DUX4L24-201ENST00000617576 1269 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms