Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.59■■■□□ 2.65
COL11A2P13942 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
COL11A2P13942 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.59■■■□□ 2.65
COL11A2P13942 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
COL11A2P13942 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.58■■■□□ 2.65
COL11A2P13942 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
COL11A2P13942 AC126177.7-201ENST00000547904 679 ntBASIC31.58■■■□□ 2.65
COL11A2P13942 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
COL11A2P13942 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.58■■■□□ 2.65
COL11A2P13942 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
COL11A2P13942 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
COL11A2P13942 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.57■■■□□ 2.64
COL11A2P13942 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.57■■■□□ 2.64
COL11A2P13942 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
COL11A2P13942 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
COL11A2P13942 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
COL11A2P13942 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.57■■■□□ 2.64
COL11A2P13942 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
COL11A2P13942 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
COL11A2P13942 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
COL11A2P13942 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.55■■■□□ 2.64
COL11A2P13942 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.55■■■□□ 2.64
COL11A2P13942 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
COL11A2P13942 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
COL11A2P13942 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
COL11A2P13942 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.55■■■□□ 2.64
COL11A2P13942 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.55■■■□□ 2.64
COL11A2P13942 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.55■■■□□ 2.64
COL11A2P13942 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
COL11A2P13942 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
COL11A2P13942 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
COL11A2P13942 AL035685.1-201ENST00000636663 812 ntBASIC31.52■■■□□ 2.64
COL11A2P13942 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
COL11A2P13942 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
COL11A2P13942 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
COL11A2P13942 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.52■■■□□ 2.64
COL11A2P13942 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.52■■■□□ 2.64
COL11A2P13942 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.51■■■□□ 2.63
COL11A2P13942 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.51■■■□□ 2.63
COL11A2P13942 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.51■■■□□ 2.63
COL11A2P13942 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.5■■■□□ 2.63
COL11A2P13942 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
COL11A2P13942 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.5■■■□□ 2.63
COL11A2P13942 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.5■■■□□ 2.63
COL11A2P13942 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.49■■■□□ 2.63
COL11A2P13942 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
COL11A2P13942 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
COL11A2P13942 AC133552.2-201ENST00000619106 1032 ntBASIC31.47■■■□□ 2.63
COL11A2P13942 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
COL11A2P13942 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.46■■■□□ 2.63
COL11A2P13942 AC025884.2-201ENST00000553429 711 ntBASIC31.46■■■□□ 2.63
COL11A2P13942 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
COL11A2P13942 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.46■■■□□ 2.63
COL11A2P13942 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.46■■■□□ 2.63
COL11A2P13942 DUX4L9-201ENST00000449051 1259 ntBASIC31.46■■■□□ 2.63
COL11A2P13942 DUX4L18-201ENST00000553347 1267 ntBASIC31.46■■■□□ 2.63
COL11A2P13942 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.45■■■□□ 2.62
COL11A2P13942 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
COL11A2P13942 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
COL11A2P13942 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
COL11A2P13942 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
COL11A2P13942 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.43■■■□□ 2.62
COL11A2P13942 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.42■■■□□ 2.62
COL11A2P13942 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
COL11A2P13942 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
COL11A2P13942 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.42■■■□□ 2.62
COL11A2P13942 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
COL11A2P13942 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
COL11A2P13942 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
COL11A2P13942 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
COL11A2P13942 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
COL11A2P13942 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.4■■■□□ 2.62
COL11A2P13942 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.4■■■□□ 2.62
COL11A2P13942 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
COL11A2P13942 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.4■■■□□ 2.62
COL11A2P13942 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.39■■■□□ 2.62
COL11A2P13942 SPCS2P3-201ENST00000500401 656 ntBASIC31.39■■■□□ 2.62
COL11A2P13942 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
COL11A2P13942 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
COL11A2P13942 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
COL11A2P13942 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC31.38■■■□□ 2.61
COL11A2P13942 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.38■■■□□ 2.61
COL11A2P13942 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.38■■■□□ 2.61
COL11A2P13942 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
COL11A2P13942 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
COL11A2P13942 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
COL11A2P13942 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
COL11A2P13942 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
COL11A2P13942 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
COL11A2P13942 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
COL11A2P13942 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
COL11A2P13942 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.36■■■□□ 2.61
COL11A2P13942 AC093536.1-201ENST00000569153 554 ntBASIC31.35■■■□□ 2.61
COL11A2P13942 AC026202.3-201ENST00000600805 1127 ntBASIC31.34■■■□□ 2.61
COL11A2P13942 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
COL11A2P13942 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
COL11A2P13942 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
COL11A2P13942 RAP2CP1-202ENST00000605179 643 ntBASIC31.33■■■□□ 2.61
COL11A2P13942 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.32■■■□□ 2.61
COL11A2P13942 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms