Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AL592293.1-201ENST00000502889 1188 ntBASIC27.1■■□□□ 1.93
RB1P06400 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RB1P06400 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RB1P06400 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RB1P06400 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.09■■□□□ 1.93
RB1P06400 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
RB1P06400 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RB1P06400 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RB1P06400 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
RB1P06400 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
RB1P06400 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.08■■□□□ 1.93
RB1P06400 AC009831.1-201ENST00000580420 1582 ntBASIC27.08■■□□□ 1.93
RB1P06400 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RB1P06400 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RB1P06400 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RB1P06400 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.06■■□□□ 1.92
RB1P06400 DUX4L18-201ENST00000553347 1267 ntBASIC27.06■■□□□ 1.92
RB1P06400 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.05■■□□□ 1.92
RB1P06400 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
RB1P06400 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RB1P06400 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RB1P06400 SMPD5-203ENST00000639008 1464 ntBASIC27.05■■□□□ 1.92
RB1P06400 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.05■■□□□ 1.92
RB1P06400 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RB1P06400 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC27.04■■□□□ 1.92
RB1P06400 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
RB1P06400 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
RB1P06400 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
RB1P06400 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
RB1P06400 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.03■■□□□ 1.92
RB1P06400 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RB1P06400 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
RB1P06400 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
RB1P06400 AL035685.1-201ENST00000636663 812 ntBASIC27.02■■□□□ 1.92
RB1P06400 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.02■■□□□ 1.92
RB1P06400 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC27.01■■□□□ 1.91
RB1P06400 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RB1P06400 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RB1P06400 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
RB1P06400 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27■■□□□ 1.91
RB1P06400 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
RB1P06400 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RB1P06400 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
RB1P06400 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RB1P06400 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.99■■□□□ 1.91
RB1P06400 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.99■■□□□ 1.91
RB1P06400 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.99■■□□□ 1.91
RB1P06400 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RB1P06400 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RB1P06400 AC026202.3-201ENST00000600805 1127 ntBASIC26.98■■□□□ 1.91
RB1P06400 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RB1P06400 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.97■■□□□ 1.91
RB1P06400 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
RB1P06400 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.96■■□□□ 1.91
RB1P06400 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RB1P06400 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
RB1P06400 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.96■■□□□ 1.91
RB1P06400 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RB1P06400 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
RB1P06400 AL451085.2-201ENST00000605085 799 ntBASIC26.95■■□□□ 1.9
RB1P06400 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RB1P06400 AP004833.2-201ENST00000532228 1454 ntBASIC26.94■■□□□ 1.9
RB1P06400 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RB1P06400 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RB1P06400 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.94■■□□□ 1.9
RB1P06400 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
RB1P06400 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.93■■□□□ 1.9
RB1P06400 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.93■■□□□ 1.9
RB1P06400 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RB1P06400 AL359258.2-201ENST00000564063 1566 ntBASIC26.92■■□□□ 1.9
RB1P06400 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RB1P06400 AC025884.2-201ENST00000553429 711 ntBASIC26.92■■□□□ 1.9
RB1P06400 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.92■■□□□ 1.9
RB1P06400 AC074183.2-201ENST00000623112 922 ntBASIC26.92■■□□□ 1.9
RB1P06400 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
RB1P06400 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.91■■□□□ 1.9
RB1P06400 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RB1P06400 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RB1P06400 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
RB1P06400 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.9■■□□□ 1.9
RB1P06400 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.9■■□□□ 1.9
RB1P06400 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
RB1P06400 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
RB1P06400 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RB1P06400 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.9■■□□□ 1.9
RB1P06400 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.89■■□□□ 1.9
RB1P06400 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RB1P06400 RP9P-202ENST00000450133 1212 ntBASIC26.89■■□□□ 1.9
RB1P06400 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.89■■□□□ 1.89
RB1P06400 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.88■■□□□ 1.89
RB1P06400 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.88■■□□□ 1.89
RB1P06400 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
RB1P06400 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RB1P06400 DUX4L9-201ENST00000449051 1259 ntBASIC26.87■■□□□ 1.89
RB1P06400 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.87■■□□□ 1.89
RB1P06400 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
RB1P06400 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.87■■□□□ 1.89
RB1P06400 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RB1P06400 BHLHE23-202ENST00000612929 1109 ntBASIC26.86■■□□□ 1.89
RB1P06400 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms