Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC34■■■■□ 3.03
COL5A2P05997 AL451085.2-201ENST00000605085 799 ntBASIC34■■■■□ 3.03
COL5A2P05997 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC33.99■■■■□ 3.03
COL5A2P05997 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
COL5A2P05997 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC33.97■■■■□ 3.03
COL5A2P05997 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC33.97■■■■□ 3.03
COL5A2P05997 AL035685.1-201ENST00000636663 812 ntBASIC33.97■■■■□ 3.03
COL5A2P05997 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
COL5A2P05997 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
COL5A2P05997 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC33.96■■■■□ 3.03
COL5A2P05997 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
COL5A2P05997 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
COL5A2P05997 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
COL5A2P05997 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
COL5A2P05997 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC33.95■■■■□ 3.02
COL5A2P05997 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC33.95■■■■□ 3.02
COL5A2P05997 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC33.95■■■■□ 3.02
COL5A2P05997 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC33.95■■■■□ 3.02
COL5A2P05997 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC33.94■■■■□ 3.02
COL5A2P05997 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC33.94■■■■□ 3.02
COL5A2P05997 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
COL5A2P05997 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
COL5A2P05997 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC33.93■■■■□ 3.02
COL5A2P05997 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
COL5A2P05997 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC33.92■■■■□ 3.02
COL5A2P05997 REST-210ENST00000638187 1334 ntTSL 5 BASIC33.92■■■■□ 3.02
COL5A2P05997 DUX4L18-201ENST00000553347 1267 ntBASIC33.92■■■■□ 3.02
COL5A2P05997 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC33.91■■■■□ 3.02
COL5A2P05997 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
COL5A2P05997 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
COL5A2P05997 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC33.9■■■■□ 3.02
COL5A2P05997 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC33.9■■■■□ 3.02
COL5A2P05997 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
COL5A2P05997 AC133552.2-201ENST00000619106 1032 ntBASIC33.89■■■■□ 3.02
COL5A2P05997 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
COL5A2P05997 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
COL5A2P05997 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC33.88■■■■□ 3.01
COL5A2P05997 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
COL5A2P05997 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
COL5A2P05997 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
COL5A2P05997 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
COL5A2P05997 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC33.88■■■■□ 3.01
COL5A2P05997 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC33.88■■■■□ 3.01
COL5A2P05997 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC33.87■■■■□ 3.01
COL5A2P05997 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC33.87■■■■□ 3.01
COL5A2P05997 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC33.87■■■■□ 3.01
COL5A2P05997 TRIR-205ENST00000592273 783 ntTSL 3 BASIC33.87■■■■□ 3.01
COL5A2P05997 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC33.86■■■■□ 3.01
COL5A2P05997 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
COL5A2P05997 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC33.86■■■■□ 3.01
COL5A2P05997 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
COL5A2P05997 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC33.84■■■■□ 3.01
COL5A2P05997 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
COL5A2P05997 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC33.83■■■■□ 3.01
COL5A2P05997 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC33.81■■■■□ 3
COL5A2P05997 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC33.81■■■■□ 3
COL5A2P05997 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC33.8■■■■□ 3
COL5A2P05997 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC33.8■■■■□ 3
COL5A2P05997 AC026202.3-201ENST00000600805 1127 ntBASIC33.8■■■■□ 3
COL5A2P05997 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC33.79■■■■□ 3
COL5A2P05997 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC33.79■■■■□ 3
COL5A2P05997 AC025884.2-201ENST00000553429 711 ntBASIC33.79■■■■□ 3
COL5A2P05997 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC33.79■■■■□ 3
COL5A2P05997 DUX4L9-201ENST00000449051 1259 ntBASIC33.78■■■■□ 3
COL5A2P05997 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC33.78■■■■□ 3
COL5A2P05997 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC33.78■■■■□ 3
COL5A2P05997 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC33.78■■■■□ 3
COL5A2P05997 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC33.77■■■■□ 3
COL5A2P05997 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC33.77■■■■□ 3
COL5A2P05997 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
COL5A2P05997 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC33.76■■■□□ 2.99
COL5A2P05997 SMPD5-203ENST00000639008 1464 ntBASIC33.76■■■□□ 2.99
COL5A2P05997 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC33.76■■■□□ 2.99
COL5A2P05997 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
COL5A2P05997 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC33.75■■■□□ 2.99
COL5A2P05997 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
COL5A2P05997 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC33.74■■■□□ 2.99
COL5A2P05997 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
COL5A2P05997 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
COL5A2P05997 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC33.72■■■□□ 2.99
COL5A2P05997 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
COL5A2P05997 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC33.72■■■□□ 2.99
COL5A2P05997 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
COL5A2P05997 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
COL5A2P05997 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC33.71■■■□□ 2.99
COL5A2P05997 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC33.71■■■□□ 2.99
COL5A2P05997 SPCS2P3-201ENST00000500401 656 ntBASIC33.7■■■□□ 2.99
COL5A2P05997 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
COL5A2P05997 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
COL5A2P05997 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
COL5A2P05997 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC33.69■■■□□ 2.98
COL5A2P05997 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC33.69■■■□□ 2.98
COL5A2P05997 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC33.69■■■□□ 2.98
COL5A2P05997 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
COL5A2P05997 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC33.69■■■□□ 2.98
COL5A2P05997 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC33.69■■■□□ 2.98
COL5A2P05997 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC33.69■■■□□ 2.98
COL5A2P05997 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC33.69■■■□□ 2.98
COL5A2P05997 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC33.68■■■□□ 2.98
COL5A2P05997 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC33.68■■■□□ 2.98
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms