Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CHGBP05060 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.53■■■□□ 2.48
CHGBP05060 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.52■■■□□ 2.48
CHGBP05060 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CHGBP05060 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.48
CHGBP05060 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CHGBP05060 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.51■■■□□ 2.47
CHGBP05060 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CHGBP05060 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.5■■■□□ 2.47
CHGBP05060 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CHGBP05060 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
CHGBP05060 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CHGBP05060 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
CHGBP05060 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
CHGBP05060 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CHGBP05060 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CHGBP05060 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
CHGBP05060 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.49■■■□□ 2.47
CHGBP05060 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CHGBP05060 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CHGBP05060 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CHGBP05060 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
CHGBP05060 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CHGBP05060 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
CHGBP05060 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.47■■■□□ 2.47
CHGBP05060 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CHGBP05060 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CHGBP05060 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CHGBP05060 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
CHGBP05060 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.45■■■□□ 2.47
CHGBP05060 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.45■■■□□ 2.47
CHGBP05060 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CHGBP05060 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.45■■■□□ 2.47
CHGBP05060 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.45■■■□□ 2.46
CHGBP05060 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.44■■■□□ 2.46
CHGBP05060 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.44■■■□□ 2.46
CHGBP05060 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.44■■■□□ 2.46
CHGBP05060 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CHGBP05060 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CHGBP05060 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
CHGBP05060 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.42■■■□□ 2.46
CHGBP05060 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CHGBP05060 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
CHGBP05060 MIR219A2-201ENST00000608502 1504 ntBASIC30.42■■■□□ 2.46
CHGBP05060 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.41■■■□□ 2.46
CHGBP05060 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHGBP05060 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
CHGBP05060 AC008813.1-201ENST00000536597 885 ntBASIC30.4■■■□□ 2.46
CHGBP05060 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.39■■■□□ 2.46
CHGBP05060 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
CHGBP05060 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.39■■■□□ 2.45
CHGBP05060 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.39■■■□□ 2.45
CHGBP05060 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHGBP05060 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHGBP05060 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHGBP05060 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHGBP05060 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHGBP05060 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.38■■■□□ 2.45
CHGBP05060 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.37■■■□□ 2.45
CHGBP05060 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CHGBP05060 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHGBP05060 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.36■■■□□ 2.45
CHGBP05060 AC148477.6-201ENST00000623746 465 ntBASIC30.36■■■□□ 2.45
CHGBP05060 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CHGBP05060 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
CHGBP05060 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHGBP05060 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHGBP05060 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHGBP05060 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHGBP05060 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHGBP05060 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHGBP05060 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHGBP05060 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHGBP05060 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHGBP05060 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHGBP05060 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
CHGBP05060 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.35■■■□□ 2.45
CHGBP05060 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHGBP05060 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
CHGBP05060 AC142086.6-201ENST00000621154 1765 ntBASIC30.34■■■□□ 2.45
CHGBP05060 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CHGBP05060 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.34■■■□□ 2.45
CHGBP05060 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CHGBP05060 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.33■■■□□ 2.45
CHGBP05060 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.33■■■□□ 2.45
CHGBP05060 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
CHGBP05060 AC018358.1-201ENST00000631079 1402 ntBASIC30.32■■■□□ 2.44
CHGBP05060 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CHGBP05060 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.32■■■□□ 2.44
CHGBP05060 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CHGBP05060 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.32■■■□□ 2.44
CHGBP05060 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.32■■■□□ 2.44
CHGBP05060 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CHGBP05060 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CHGBP05060 MED25-214ENST00000622402 642 ntTSL 5 BASIC30.32■■■□□ 2.44
CHGBP05060 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
CHGBP05060 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CHGBP05060 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CHGBP05060 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CHGBP05060 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms