Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TBC1D4O60343 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
TBC1D4O60343 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TBC1D4O60343 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TBC1D4O60343 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
TBC1D4O60343 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
TBC1D4O60343 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.81■■□□□ 1.88
TBC1D4O60343 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.81■■□□□ 1.88
TBC1D4O60343 ABCB10P3-201ENST00000561950 2166 ntBASIC26.81■■□□□ 1.88
TBC1D4O60343 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
TBC1D4O60343 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
TBC1D4O60343 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
TBC1D4O60343 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TBC1D4O60343 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
TBC1D4O60343 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
TBC1D4O60343 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
TBC1D4O60343 ABCB10P1-201ENST00000614297 2181 ntBASIC26.79■■□□□ 1.88
TBC1D4O60343 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.79■■□□□ 1.88
TBC1D4O60343 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.79■■□□□ 1.88
TBC1D4O60343 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
TBC1D4O60343 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
TBC1D4O60343 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TBC1D4O60343 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TBC1D4O60343 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.78■■□□□ 1.88
TBC1D4O60343 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.77■■□□□ 1.88
TBC1D4O60343 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
TBC1D4O60343 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.77■■□□□ 1.88
TBC1D4O60343 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.77■■□□□ 1.88
TBC1D4O60343 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
TBC1D4O60343 NTF6A-201ENST00000591175 560 ntBASIC26.77■■□□□ 1.88
TBC1D4O60343 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.76■■□□□ 1.87
TBC1D4O60343 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
TBC1D4O60343 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.76■■□□□ 1.87
TBC1D4O60343 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
TBC1D4O60343 ECEL1P2-201ENST00000461596 1295 ntBASIC26.75■■□□□ 1.87
TBC1D4O60343 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.75■■□□□ 1.87
TBC1D4O60343 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TBC1D4O60343 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TBC1D4O60343 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TBC1D4O60343 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
TBC1D4O60343 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.74■■□□□ 1.87
TBC1D4O60343 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TBC1D4O60343 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TBC1D4O60343 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.73■■□□□ 1.87
TBC1D4O60343 AC126177.7-201ENST00000547904 679 ntBASIC26.73■■□□□ 1.87
TBC1D4O60343 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
TBC1D4O60343 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.73■■□□□ 1.87
TBC1D4O60343 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TBC1D4O60343 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
TBC1D4O60343 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TBC1D4O60343 AL157400.5-201ENST00000507624 621 ntBASIC26.72■■□□□ 1.87
TBC1D4O60343 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.72■■□□□ 1.87
TBC1D4O60343 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
TBC1D4O60343 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TBC1D4O60343 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.72■■□□□ 1.87
TBC1D4O60343 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TBC1D4O60343 AP002414.2-202ENST00000590929 1450 ntBASIC26.71■■□□□ 1.87
TBC1D4O60343 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.71■■□□□ 1.87
TBC1D4O60343 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
TBC1D4O60343 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TBC1D4O60343 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.69■■□□□ 1.86
TBC1D4O60343 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.69■■□□□ 1.86
TBC1D4O60343 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.69■■□□□ 1.86
TBC1D4O60343 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
TBC1D4O60343 U85056.1-201ENST00000616429 682 ntBASIC26.68■■□□□ 1.86
TBC1D4O60343 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TBC1D4O60343 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
TBC1D4O60343 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TBC1D4O60343 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.67■■□□□ 1.86
TBC1D4O60343 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TBC1D4O60343 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
TBC1D4O60343 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.66■■□□□ 1.86
TBC1D4O60343 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TBC1D4O60343 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TBC1D4O60343 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
TBC1D4O60343 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TBC1D4O60343 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TBC1D4O60343 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TBC1D4O60343 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
TBC1D4O60343 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TBC1D4O60343 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
TBC1D4O60343 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TBC1D4O60343 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
TBC1D4O60343 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.64■■□□□ 1.85
TBC1D4O60343 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
TBC1D4O60343 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.63■■□□□ 1.85
TBC1D4O60343 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TBC1D4O60343 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
TBC1D4O60343 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.62■■□□□ 1.85
TBC1D4O60343 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.62■■□□□ 1.85
TBC1D4O60343 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.62■■□□□ 1.85
TBC1D4O60343 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TBC1D4O60343 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TBC1D4O60343 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.62■■□□□ 1.85
TBC1D4O60343 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TBC1D4O60343 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
TBC1D4O60343 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.6■■□□□ 1.85
TBC1D4O60343 AL359258.2-201ENST00000564063 1566 ntBASIC26.6■■□□□ 1.85
TBC1D4O60343 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TBC1D4O60343 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms