Protein–RNA interactions for Protein: O43508

TNFSF12, Tumor necrosis factor ligand superfamily member 12, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12O43508 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF12O43508 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TNFSF12O43508 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF12O43508 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF12O43508 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TNFSF12O43508 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.8■□□□□ 0.92
TNFSF12O43508 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.8■□□□□ 0.92
TNFSF12O43508 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF12O43508 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.79■□□□□ 0.92
TNFSF12O43508 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.79■□□□□ 0.92
TNFSF12O43508 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.79■□□□□ 0.92
TNFSF12O43508 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF12O43508 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF12O43508 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF12O43508 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.78■□□□□ 0.92
TNFSF12O43508 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TNFSF12O43508 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF12O43508 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.76■□□□□ 0.91
TNFSF12O43508 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TNFSF12O43508 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.75■□□□□ 0.91
TNFSF12O43508 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF12O43508 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF12O43508 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TNFSF12O43508 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF12O43508 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.75■□□□□ 0.91
TNFSF12O43508 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF12O43508 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.74■□□□□ 0.91
TNFSF12O43508 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TNFSF12O43508 AL449106.1-201ENST00000608517 1980 ntBASIC20.74■□□□□ 0.91
TNFSF12O43508 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF12O43508 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF12O43508 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF12O43508 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF12O43508 AC005559.1-201ENST00000589661 871 ntBASIC20.73■□□□□ 0.91
TNFSF12O43508 AC135983.2-203ENST00000454486 1613 ntBASIC20.73■□□□□ 0.91
TNFSF12O43508 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF12O43508 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
TNFSF12O43508 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TNFSF12O43508 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.73■□□□□ 0.91
TNFSF12O43508 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF12O43508 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF12O43508 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF12O43508 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TNFSF12O43508 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TNFSF12O43508 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.72■□□□□ 0.91
TNFSF12O43508 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12O43508 WHAMMP2-203ENST00000563942 1603 ntBASIC20.71■□□□□ 0.91
TNFSF12O43508 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12O43508 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12O43508 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.71■□□□□ 0.91
TNFSF12O43508 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.71■□□□□ 0.91
TNFSF12O43508 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12O43508 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12O43508 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12O43508 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TNFSF12O43508 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF12O43508 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF12O43508 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
TNFSF12O43508 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNFSF12O43508 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.69■□□□□ 0.9
TNFSF12O43508 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNFSF12O43508 SUZ12P1-203ENST00000578195 985 ntBASIC20.69■□□□□ 0.9
TNFSF12O43508 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TNFSF12O43508 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNFSF12O43508 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TNFSF12O43508 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF12O43508 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF12O43508 AC018358.1-201ENST00000631079 1402 ntBASIC20.68■□□□□ 0.9
TNFSF12O43508 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TNFSF12O43508 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12O43508 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TNFSF12O43508 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12O43508 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12O43508 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12O43508 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12O43508 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.67■□□□□ 0.9
TNFSF12O43508 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TNFSF12O43508 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12O43508 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.67■□□□□ 0.9
TNFSF12O43508 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF12O43508 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.66■□□□□ 0.9
TNFSF12O43508 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.66■□□□□ 0.9
TNFSF12O43508 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.66■□□□□ 0.9
TNFSF12O43508 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF12O43508 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF12O43508 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF12O43508 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.65■□□□□ 0.9
TNFSF12O43508 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF12O43508 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF12O43508 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TNFSF12O43508 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
TNFSF12O43508 AC108673.1-201ENST00000510422 1159 ntBASIC20.65■□□□□ 0.9
TNFSF12O43508 MIR6090-201ENST00000622481 60 ntBASIC20.65■□□□□ 0.9
TNFSF12O43508 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.65■□□□□ 0.9
TNFSF12O43508 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TNFSF12O43508 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TNFSF12O43508 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.64■□□□□ 0.89
TNFSF12O43508 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TNFSF12O43508 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF12O43508 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms