Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ABCD4O14678 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ABCD4O14678 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.08■■□□□ 1.13
ABCD4O14678 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.07■■□□□ 1.12
ABCD4O14678 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
ABCD4O14678 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ABCD4O14678 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
ABCD4O14678 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
ABCD4O14678 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ABCD4O14678 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
ABCD4O14678 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.05■■□□□ 1.12
ABCD4O14678 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
ABCD4O14678 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
ABCD4O14678 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ABCD4O14678 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ABCD4O14678 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.04■■□□□ 1.12
ABCD4O14678 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCD4O14678 AP004833.2-201ENST00000532228 1454 ntBASIC22.03■■□□□ 1.12
ABCD4O14678 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ABCD4O14678 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.03■■□□□ 1.12
ABCD4O14678 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.03■■□□□ 1.12
ABCD4O14678 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ABCD4O14678 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ABCD4O14678 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ABCD4O14678 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ABCD4O14678 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
ABCD4O14678 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCD4O14678 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ABCD4O14678 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ABCD4O14678 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ABCD4O14678 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
ABCD4O14678 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ABCD4O14678 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.02■■□□□ 1.12
ABCD4O14678 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
ABCD4O14678 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCD4O14678 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCD4O14678 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
ABCD4O14678 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ABCD4O14678 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
ABCD4O14678 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
ABCD4O14678 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ABCD4O14678 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22■■□□□ 1.11
ABCD4O14678 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22■■□□□ 1.11
ABCD4O14678 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ABCD4O14678 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.99■■□□□ 1.11
ABCD4O14678 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ABCD4O14678 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.99■■□□□ 1.11
ABCD4O14678 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.99■■□□□ 1.11
ABCD4O14678 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ABCD4O14678 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ABCD4O14678 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
ABCD4O14678 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ABCD4O14678 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ABCD4O14678 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ABCD4O14678 GPX1-201ENST00000419349 1106 ntBASIC21.98■■□□□ 1.11
ABCD4O14678 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.98■■□□□ 1.11
ABCD4O14678 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.98■■□□□ 1.11
ABCD4O14678 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.98■■□□□ 1.11
ABCD4O14678 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
ABCD4O14678 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCD4O14678 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
ABCD4O14678 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCD4O14678 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.97■■□□□ 1.11
ABCD4O14678 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.97■■□□□ 1.11
ABCD4O14678 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
ABCD4O14678 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCD4O14678 AC100797.4-201ENST00000631653 1827 ntBASIC21.96■■□□□ 1.11
ABCD4O14678 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
ABCD4O14678 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ABCD4O14678 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.96■■□□□ 1.11
ABCD4O14678 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.96■■□□□ 1.11
ABCD4O14678 AC148477.6-201ENST00000623746 465 ntBASIC21.95■■□□□ 1.1
ABCD4O14678 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.95■■□□□ 1.1
ABCD4O14678 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ABCD4O14678 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ABCD4O14678 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.94■■□□□ 1.1
ABCD4O14678 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ABCD4O14678 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.94■■□□□ 1.1
ABCD4O14678 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ABCD4O14678 AL139393.2-201ENST00000608721 2025 ntBASIC21.94■■□□□ 1.1
ABCD4O14678 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
ABCD4O14678 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.92■■□□□ 1.1
ABCD4O14678 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
ABCD4O14678 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.92■■□□□ 1.1
ABCD4O14678 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ABCD4O14678 AC022413.1-201ENST00000624602 984 ntBASIC21.92■■□□□ 1.1
ABCD4O14678 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.92■■□□□ 1.1
ABCD4O14678 MIR219A2-201ENST00000608502 1504 ntBASIC21.91■■□□□ 1.1
ABCD4O14678 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ABCD4O14678 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ABCD4O14678 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.9■■□□□ 1.1
ABCD4O14678 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ABCD4O14678 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ABCD4O14678 RARRES2P2-201ENST00000394842 485 ntBASIC21.9■■□□□ 1.1
ABCD4O14678 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.9■■□□□ 1.1
ABCD4O14678 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
ABCD4O14678 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.89■■□□□ 1.1
ABCD4O14678 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
ABCD4O14678 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.89■■□□□ 1.1
ABCD4O14678 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms