Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
TMEM88BA6NKF7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TMEM88BA6NKF7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
TMEM88BA6NKF7 DUX4L9-201ENST00000449051 1259 ntBASIC30.24■■■□□ 2.43
TMEM88BA6NKF7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.24■■■□□ 2.43
TMEM88BA6NKF7 AC120057.4-201ENST00000624722 1615 ntBASIC30.24■■■□□ 2.43
TMEM88BA6NKF7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TMEM88BA6NKF7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
TMEM88BA6NKF7 AL356441.2-201ENST00000443009 864 ntBASIC30.23■■■□□ 2.43
TMEM88BA6NKF7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC30.23■■■□□ 2.43
TMEM88BA6NKF7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TMEM88BA6NKF7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
TMEM88BA6NKF7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TMEM88BA6NKF7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.22■■■□□ 2.43
TMEM88BA6NKF7 AC103834.1-201ENST00000520383 144 ntBASIC30.22■■■□□ 2.43
TMEM88BA6NKF7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
TMEM88BA6NKF7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
TMEM88BA6NKF7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.21■■■□□ 2.43
TMEM88BA6NKF7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
TMEM88BA6NKF7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
TMEM88BA6NKF7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
TMEM88BA6NKF7 AC026202.3-201ENST00000600805 1127 ntBASIC30.2■■■□□ 2.43
TMEM88BA6NKF7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
TMEM88BA6NKF7 AC127502.1-201ENST00000399971 1502 ntBASIC30.2■■■□□ 2.42
TMEM88BA6NKF7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
TMEM88BA6NKF7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
TMEM88BA6NKF7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
TMEM88BA6NKF7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC30.18■■■□□ 2.42
TMEM88BA6NKF7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC30.18■■■□□ 2.42
TMEM88BA6NKF7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC30.18■■■□□ 2.42
TMEM88BA6NKF7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.18■■■□□ 2.42
TMEM88BA6NKF7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
TMEM88BA6NKF7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.17■■■□□ 2.42
TMEM88BA6NKF7 AC025884.2-201ENST00000553429 711 ntBASIC30.17■■■□□ 2.42
TMEM88BA6NKF7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC30.17■■■□□ 2.42
TMEM88BA6NKF7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
TMEM88BA6NKF7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
TMEM88BA6NKF7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
TMEM88BA6NKF7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
TMEM88BA6NKF7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30.16■■■□□ 2.42
TMEM88BA6NKF7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.16■■■□□ 2.42
TMEM88BA6NKF7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
TMEM88BA6NKF7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
TMEM88BA6NKF7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
TMEM88BA6NKF7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC30.15■■■□□ 2.42
TMEM88BA6NKF7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC30.15■■■□□ 2.42
TMEM88BA6NKF7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
TMEM88BA6NKF7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
TMEM88BA6NKF7 SMPD5-203ENST00000639008 1464 ntBASIC30.14■■■□□ 2.42
TMEM88BA6NKF7 AL161658.1-201ENST00000623641 1967 ntBASIC30.14■■■□□ 2.42
TMEM88BA6NKF7 AC139795.1-202ENST00000500444 432 ntBASIC30.14■■■□□ 2.42
TMEM88BA6NKF7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
TMEM88BA6NKF7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC30.14■■■□□ 2.41
TMEM88BA6NKF7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
TMEM88BA6NKF7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC30.13■■■□□ 2.41
TMEM88BA6NKF7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
TMEM88BA6NKF7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.13■■■□□ 2.41
TMEM88BA6NKF7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
TMEM88BA6NKF7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
TMEM88BA6NKF7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
TMEM88BA6NKF7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
TMEM88BA6NKF7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.11■■■□□ 2.41
TMEM88BA6NKF7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TMEM88BA6NKF7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
TMEM88BA6NKF7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
TMEM88BA6NKF7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
TMEM88BA6NKF7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
TMEM88BA6NKF7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.09■■■□□ 2.41
TMEM88BA6NKF7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.09■■■□□ 2.41
TMEM88BA6NKF7 AC008406.3-201ENST00000620001 1374 ntBASIC30.09■■■□□ 2.41
TMEM88BA6NKF7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
TMEM88BA6NKF7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
TMEM88BA6NKF7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
TMEM88BA6NKF7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.06■■■□□ 2.4
TMEM88BA6NKF7 PVT1_1.1-201ENST00000615125 194 ntBASIC30.06■■■□□ 2.4
TMEM88BA6NKF7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.06■■■□□ 2.4
TMEM88BA6NKF7 SPCS2P3-201ENST00000500401 656 ntBASIC30.05■■■□□ 2.4
TMEM88BA6NKF7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TMEM88BA6NKF7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
TMEM88BA6NKF7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
TMEM88BA6NKF7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
TMEM88BA6NKF7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC30.03■■■□□ 2.4
TMEM88BA6NKF7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TMEM88BA6NKF7 MIR4508-201ENST00000584178 70 ntBASIC30.03■■■□□ 2.4
TMEM88BA6NKF7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
TMEM88BA6NKF7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC30.02■■■□□ 2.4
TMEM88BA6NKF7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
TMEM88BA6NKF7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
TMEM88BA6NKF7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
TMEM88BA6NKF7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
TMEM88BA6NKF7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
TMEM88BA6NKF7 HYI-210ENST00000486909 905 ntTSL 5 BASIC30.01■■■□□ 2.39
TMEM88BA6NKF7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
TMEM88BA6NKF7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC30.01■■■□□ 2.39
TMEM88BA6NKF7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.01■■■□□ 2.39
TMEM88BA6NKF7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30■■■□□ 2.39
TMEM88BA6NKF7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.99■■■□□ 2.39
TMEM88BA6NKF7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
TMEM88BA6NKF7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC29.99■■■□□ 2.39
TMEM88BA6NKF7 MIR6765-201ENST00000614092 87 ntBASIC29.99■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms