Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.49■■□□□ 1.83
TCRBV5S1A1TA0A578 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.49■■□□□ 1.83
TCRBV5S1A1TA0A578 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TCRBV5S1A1TA0A578 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TCRBV5S1A1TA0A578 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TCRBV5S1A1TA0A578 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.48■■□□□ 1.83
TCRBV5S1A1TA0A578 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
TCRBV5S1A1TA0A578 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
TCRBV5S1A1TA0A578 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TCRBV5S1A1TA0A578 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
TCRBV5S1A1TA0A578 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TCRBV5S1A1TA0A578 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.47■■□□□ 1.83
TCRBV5S1A1TA0A578 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
TCRBV5S1A1TA0A578 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.47■■□□□ 1.83
TCRBV5S1A1TA0A578 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.47■■□□□ 1.83
TCRBV5S1A1TA0A578 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.47■■□□□ 1.83
TCRBV5S1A1TA0A578 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
TCRBV5S1A1TA0A578 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.46■■□□□ 1.83
TCRBV5S1A1TA0A578 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
TCRBV5S1A1TA0A578 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
TCRBV5S1A1TA0A578 ZNRF2P2-203ENST00000454624 420 ntBASIC26.45■■□□□ 1.82
TCRBV5S1A1TA0A578 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
TCRBV5S1A1TA0A578 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
TCRBV5S1A1TA0A578 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TCRBV5S1A1TA0A578 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
TCRBV5S1A1TA0A578 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
TCRBV5S1A1TA0A578 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TCRBV5S1A1TA0A578 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TCRBV5S1A1TA0A578 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
TCRBV5S1A1TA0A578 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
TCRBV5S1A1TA0A578 DUX4L13-201ENST00000554103 1267 ntBASIC26.43■■□□□ 1.82
TCRBV5S1A1TA0A578 DUX4L15-201ENST00000611059 1267 ntBASIC26.43■■□□□ 1.82
TCRBV5S1A1TA0A578 DUX4L23-201ENST00000615195 1269 ntBASIC26.43■■□□□ 1.82
TCRBV5S1A1TA0A578 DUX4L24-201ENST00000617576 1269 ntBASIC26.43■■□□□ 1.82
TCRBV5S1A1TA0A578 DUX4L22-201ENST00000618238 1269 ntBASIC26.43■■□□□ 1.82
TCRBV5S1A1TA0A578 DUX4L20-201ENST00000619712 1269 ntBASIC26.43■■□□□ 1.82
TCRBV5S1A1TA0A578 DUX4L21-201ENST00000622058 1269 ntBASIC26.43■■□□□ 1.82
TCRBV5S1A1TA0A578 DUX4L10-201ENST00000622460 1267 ntBASIC26.43■■□□□ 1.82
TCRBV5S1A1TA0A578 DUX4L25-201ENST00000624915 1269 ntBASIC26.43■■□□□ 1.82
TCRBV5S1A1TA0A578 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
TCRBV5S1A1TA0A578 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
TCRBV5S1A1TA0A578 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TCRBV5S1A1TA0A578 DUX4L11-201ENST00000611504 1267 ntBASIC26.42■■□□□ 1.82
TCRBV5S1A1TA0A578 DUX4L12-201ENST00000614593 1267 ntBASIC26.42■■□□□ 1.82
TCRBV5S1A1TA0A578 DUX4L14-201ENST00000621227 1267 ntBASIC26.42■■□□□ 1.82
TCRBV5S1A1TA0A578 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TCRBV5S1A1TA0A578 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
TCRBV5S1A1TA0A578 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TCRBV5S1A1TA0A578 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TCRBV5S1A1TA0A578 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TCRBV5S1A1TA0A578 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TCRBV5S1A1TA0A578 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
TCRBV5S1A1TA0A578 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.4■■□□□ 1.82
TCRBV5S1A1TA0A578 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TCRBV5S1A1TA0A578 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.4■■□□□ 1.82
TCRBV5S1A1TA0A578 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
TCRBV5S1A1TA0A578 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.39■■□□□ 1.82
TCRBV5S1A1TA0A578 ABHD17AP4-201ENST00000411545 909 ntBASIC26.39■■□□□ 1.82
TCRBV5S1A1TA0A578 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TCRBV5S1A1TA0A578 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
TCRBV5S1A1TA0A578 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.38■■□□□ 1.81
TCRBV5S1A1TA0A578 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TCRBV5S1A1TA0A578 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TCRBV5S1A1TA0A578 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TCRBV5S1A1TA0A578 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.37■■□□□ 1.81
TCRBV5S1A1TA0A578 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.37■■□□□ 1.81
TCRBV5S1A1TA0A578 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.37■■□□□ 1.81
TCRBV5S1A1TA0A578 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.37■■□□□ 1.81
TCRBV5S1A1TA0A578 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TCRBV5S1A1TA0A578 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.37■■□□□ 1.81
TCRBV5S1A1TA0A578 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TCRBV5S1A1TA0A578 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.36■■□□□ 1.81
TCRBV5S1A1TA0A578 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
TCRBV5S1A1TA0A578 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TCRBV5S1A1TA0A578 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.36■■□□□ 1.81
TCRBV5S1A1TA0A578 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
TCRBV5S1A1TA0A578 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.34■■□□□ 1.81
TCRBV5S1A1TA0A578 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TCRBV5S1A1TA0A578 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
TCRBV5S1A1TA0A578 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TCRBV5S1A1TA0A578 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
TCRBV5S1A1TA0A578 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.33■■□□□ 1.81
TCRBV5S1A1TA0A578 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.33■■□□□ 1.81
TCRBV5S1A1TA0A578 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.32■■□□□ 1.8
TCRBV5S1A1TA0A578 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
TCRBV5S1A1TA0A578 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TCRBV5S1A1TA0A578 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TCRBV5S1A1TA0A578 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TCRBV5S1A1TA0A578 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TCRBV5S1A1TA0A578 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TCRBV5S1A1TA0A578 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
TCRBV5S1A1TA0A578 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TCRBV5S1A1TA0A578 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TCRBV5S1A1TA0A578 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
TCRBV5S1A1TA0A578 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TCRBV5S1A1TA0A578 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TCRBV5S1A1TA0A578 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
TCRBV5S1A1TA0A578 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TCRBV5S1A1TA0A578 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
TCRBV5S1A1TA0A578 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms