Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TRAV19A0A0A6YYK7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRAV19A0A0A6YYK7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRAV19A0A0A6YYK7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRAV19A0A0A6YYK7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.24■■□□□ 1.79
TRAV19A0A0A6YYK7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRAV19A0A0A6YYK7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
TRAV19A0A0A6YYK7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRAV19A0A0A6YYK7 AC092296.2-201ENST00000589470 999 ntBASIC26.24■■□□□ 1.79
TRAV19A0A0A6YYK7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRAV19A0A0A6YYK7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.24■■□□□ 1.79
TRAV19A0A0A6YYK7 ABCB10P3-201ENST00000561950 2166 ntBASIC26.24■■□□□ 1.79
TRAV19A0A0A6YYK7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.24■■□□□ 1.79
TRAV19A0A0A6YYK7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRAV19A0A0A6YYK7 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.23■■□□□ 1.79
TRAV19A0A0A6YYK7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TRAV19A0A0A6YYK7 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.23■■□□□ 1.79
TRAV19A0A0A6YYK7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.23■■□□□ 1.79
TRAV19A0A0A6YYK7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRAV19A0A0A6YYK7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.22■■□□□ 1.79
TRAV19A0A0A6YYK7 NTF6A-201ENST00000591175 560 ntBASIC26.22■■□□□ 1.79
TRAV19A0A0A6YYK7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TRAV19A0A0A6YYK7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
TRAV19A0A0A6YYK7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
TRAV19A0A0A6YYK7 ABCB10P1-201ENST00000614297 2181 ntBASIC26.2■■□□□ 1.79
TRAV19A0A0A6YYK7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.2■■□□□ 1.78
TRAV19A0A0A6YYK7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRAV19A0A0A6YYK7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRAV19A0A0A6YYK7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.2■■□□□ 1.78
TRAV19A0A0A6YYK7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.2■■□□□ 1.78
TRAV19A0A0A6YYK7 ECEL1P2-201ENST00000461596 1295 ntBASIC26.19■■□□□ 1.78
TRAV19A0A0A6YYK7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRAV19A0A0A6YYK7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
TRAV19A0A0A6YYK7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRAV19A0A0A6YYK7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRAV19A0A0A6YYK7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.18■■□□□ 1.78
TRAV19A0A0A6YYK7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.17■■□□□ 1.78
TRAV19A0A0A6YYK7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.16■■□□□ 1.78
TRAV19A0A0A6YYK7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TRAV19A0A0A6YYK7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.16■■□□□ 1.78
TRAV19A0A0A6YYK7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.16■■□□□ 1.78
TRAV19A0A0A6YYK7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRAV19A0A0A6YYK7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.15■■□□□ 1.78
TRAV19A0A0A6YYK7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TRAV19A0A0A6YYK7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.14■■□□□ 1.78
TRAV19A0A0A6YYK7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRAV19A0A0A6YYK7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.14■■□□□ 1.78
TRAV19A0A0A6YYK7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
TRAV19A0A0A6YYK7 AP002414.2-202ENST00000590929 1450 ntBASIC26.14■■□□□ 1.78
TRAV19A0A0A6YYK7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
TRAV19A0A0A6YYK7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRAV19A0A0A6YYK7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRAV19A0A0A6YYK7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TRAV19A0A0A6YYK7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.13■■□□□ 1.77
TRAV19A0A0A6YYK7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRAV19A0A0A6YYK7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRAV19A0A0A6YYK7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.13■■□□□ 1.77
TRAV19A0A0A6YYK7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.13■■□□□ 1.77
TRAV19A0A0A6YYK7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRAV19A0A0A6YYK7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRAV19A0A0A6YYK7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRAV19A0A0A6YYK7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.11■■□□□ 1.77
TRAV19A0A0A6YYK7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.11■■□□□ 1.77
TRAV19A0A0A6YYK7 AL157400.5-201ENST00000507624 621 ntBASIC26.11■■□□□ 1.77
TRAV19A0A0A6YYK7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRAV19A0A0A6YYK7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRAV19A0A0A6YYK7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.1■■□□□ 1.77
TRAV19A0A0A6YYK7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.1■■□□□ 1.77
TRAV19A0A0A6YYK7 AC012354.3-201ENST00000623734 483 ntBASIC26.1■■□□□ 1.77
TRAV19A0A0A6YYK7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TRAV19A0A0A6YYK7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRAV19A0A0A6YYK7 AL359258.2-201ENST00000564063 1566 ntBASIC26.09■■□□□ 1.77
TRAV19A0A0A6YYK7 U85056.1-201ENST00000616429 682 ntBASIC26.09■■□□□ 1.77
TRAV19A0A0A6YYK7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.09■■□□□ 1.77
TRAV19A0A0A6YYK7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.09■■□□□ 1.77
TRAV19A0A0A6YYK7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRAV19A0A0A6YYK7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRAV19A0A0A6YYK7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRAV19A0A0A6YYK7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
TRAV19A0A0A6YYK7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.08■■□□□ 1.77
TRAV19A0A0A6YYK7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRAV19A0A0A6YYK7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
TRAV19A0A0A6YYK7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
TRAV19A0A0A6YYK7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.07■■□□□ 1.76
TRAV19A0A0A6YYK7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TRAV19A0A0A6YYK7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TRAV19A0A0A6YYK7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TRAV19A0A0A6YYK7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRAV19A0A0A6YYK7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
TRAV19A0A0A6YYK7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
TRAV19A0A0A6YYK7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRAV19A0A0A6YYK7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.04■■□□□ 1.76
TRAV19A0A0A6YYK7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TRAV19A0A0A6YYK7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TRAV19A0A0A6YYK7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
TRAV19A0A0A6YYK7 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.04■■□□□ 1.76
TRAV19A0A0A6YYK7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TRAV19A0A0A6YYK7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
TRAV19A0A0A6YYK7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TRAV19A0A0A6YYK7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms