Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRBV6-8A0A0A6YYG3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-8A0A0A6YYG3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-8A0A0A6YYG3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRBV6-8A0A0A6YYG3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-8A0A0A6YYG3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-8A0A0A6YYG3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-8A0A0A6YYG3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV6-8A0A0A6YYG3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV6-8A0A0A6YYG3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRBV6-8A0A0A6YYG3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-8A0A0A6YYG3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-8A0A0A6YYG3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-8A0A0A6YYG3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV6-8A0A0A6YYG3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-8A0A0A6YYG3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRBV6-8A0A0A6YYG3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-8A0A0A6YYG3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-8A0A0A6YYG3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRBV6-8A0A0A6YYG3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRBV6-8A0A0A6YYG3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV6-8A0A0A6YYG3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV6-8A0A0A6YYG3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRBV6-8A0A0A6YYG3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV6-8A0A0A6YYG3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRBV6-8A0A0A6YYG3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.43■□□□□ 0.38
TRBV6-8A0A0A6YYG3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-8A0A0A6YYG3 DUX4L29-201ENST00000425409 679 ntBASIC17.42■□□□□ 0.38
TRBV6-8A0A0A6YYG3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-8A0A0A6YYG3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-8A0A0A6YYG3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV6-8A0A0A6YYG3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV6-8A0A0A6YYG3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV6-8A0A0A6YYG3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-8A0A0A6YYG3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV6-8A0A0A6YYG3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TRBV6-8A0A0A6YYG3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TRBV6-8A0A0A6YYG3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-8A0A0A6YYG3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV6-8A0A0A6YYG3 AC021231.2-201ENST00000594613 730 ntBASIC17.4■□□□□ 0.38
TRBV6-8A0A0A6YYG3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRBV6-8A0A0A6YYG3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-8A0A0A6YYG3 AC110285.7-201ENST00000624417 1536 ntBASIC17.4■□□□□ 0.38
TRBV6-8A0A0A6YYG3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.39■□□□□ 0.37
TRBV6-8A0A0A6YYG3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-8A0A0A6YYG3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBV6-8A0A0A6YYG3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-8A0A0A6YYG3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-8A0A0A6YYG3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRBV6-8A0A0A6YYG3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-8A0A0A6YYG3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-8A0A0A6YYG3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-8A0A0A6YYG3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-8A0A0A6YYG3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRBV6-8A0A0A6YYG3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.38■□□□□ 0.37
TRBV6-8A0A0A6YYG3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.38■□□□□ 0.37
TRBV6-8A0A0A6YYG3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV6-8A0A0A6YYG3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-8A0A0A6YYG3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRBV6-8A0A0A6YYG3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.37■□□□□ 0.37
TRBV6-8A0A0A6YYG3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-8A0A0A6YYG3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.37■□□□□ 0.37
TRBV6-8A0A0A6YYG3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-8A0A0A6YYG3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.37■□□□□ 0.37
TRBV6-8A0A0A6YYG3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-8A0A0A6YYG3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-8A0A0A6YYG3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-8A0A0A6YYG3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-8A0A0A6YYG3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-8A0A0A6YYG3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-8A0A0A6YYG3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRBV6-8A0A0A6YYG3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-8A0A0A6YYG3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-8A0A0A6YYG3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TRBV6-8A0A0A6YYG3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-8A0A0A6YYG3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-8A0A0A6YYG3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-8A0A0A6YYG3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TRBV6-8A0A0A6YYG3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.33■□□□□ 0.37
TRBV6-8A0A0A6YYG3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV6-8A0A0A6YYG3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.33■□□□□ 0.37
TRBV6-8A0A0A6YYG3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV6-8A0A0A6YYG3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.33■□□□□ 0.36
TRBV6-8A0A0A6YYG3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV6-8A0A0A6YYG3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRBV6-8A0A0A6YYG3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-8A0A0A6YYG3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-8A0A0A6YYG3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV6-8A0A0A6YYG3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV6-8A0A0A6YYG3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV6-8A0A0A6YYG3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-8A0A0A6YYG3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRBV6-8A0A0A6YYG3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV6-8A0A0A6YYG3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TRBV6-8A0A0A6YYG3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRBV6-8A0A0A6YYG3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-8A0A0A6YYG3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.3■□□□□ 0.36
TRBV6-8A0A0A6YYG3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV6-8A0A0A6YYG3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-8A0A0A6YYG3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms