RNA–Protein interactions for RNA: ENST00000641201.1

CALR4P-203, Transcript of calreticulin 4, pseudogene, humanhuman

Gene CALR4P, Length 2,363 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR4P-203ENST00000641201 NISCHQ9Y2I1 1504 aa19.13■□□□□ 0.65
CALR4P-203ENST00000641201 CCDC180Q9P1Z9 1646 aa17.07■□□□□ 0.32
CALR4P-203ENST00000641201 SLC24A1O60721 1099 aa17.05■□□□□ 0.32
CALR4P-203ENST00000641201 PELP1Q8IZL8 1130 aaKnown RBP16.75■□□□□ 0.27
CALR4P-203ENST00000641201 HRCP23327 699 aa16.62■□□□□ 0.25
CALR4P-203ENST00000641201 ABCC9O60706 1549 aa16.53■□□□□ 0.24
CALR4P-203ENST00000641201 MYT1Q01538 1121 aa16.33■□□□□ 0.2
CALR4P-203ENST00000641201 RB1CC1Q8TDY2 1594 aa16.01■□□□□ 0.15
CALR4P-203ENST00000641201 NACADO15069 1562 aa16.01■□□□□ 0.15
CALR4P-203ENST00000641201 PCGF6Q9BYE7 350 aa15.95■□□□□ 0.14
CALR4P-203ENST00000641201 ZCCHC6Q5VYS8 1495 aaKnown RBP15.95■□□□□ 0.14
CALR4P-203ENST00000641201 MYO15BQ96JP2 1530 aa15.95■□□□□ 0.14
CALR4P-203ENST00000641201 PPARGC1BQ86YN6 1023 aaKnown RBP15.89■□□□□ 0.13
CALR4P-203ENST00000641201 DCAF1Q9Y4B6 1507 aa15.88■□□□□ 0.13
CALR4P-203ENST00000641201 DCAF8L2P0C7V8 631 aa15.85■□□□□ 0.13
CALR4P-203ENST00000641201 ZEB1P37275 1124 aaPredicted RBP15.8■□□□□ 0.12
CALR4P-203ENST00000641201 DAXXQ9UER7 740 aaPredicted RBP15.72■□□□□ 0.11
CALR4P-203ENST00000641201 CHIC1Q5VXU3 224 aa15.71■□□□□ 0.11
CALR4P-203ENST00000641201 TTBK1Q5TCY1 1321 aaPredicted RBP15.7■□□□□ 0.1
CALR4P-203ENST00000641201 SCAF1Q9H7N4 1312 aaKnown RBP15.7■□□□□ 0.1
CALR4P-203ENST00000641201 SUPT5HO00267 1087 aaKnown RBP15.69■□□□□ 0.1
CALR4P-203ENST00000641201 PRKCSHP14314 528 aaPredicted RBP15.67■□□□□ 0.1
CALR4P-203ENST00000641201 TRIM26Q12899 539 aaPredicted RBP15.64■□□□□ 0.09
CALR4P-203ENST00000641201 UNC13AQ9UPW8 1703 aa15.63■□□□□ 0.09
CALR4P-203ENST00000641201 SHROOM4Q9ULL8 1493 aa15.57■□□□□ 0.08
CALR4P-203ENST00000641201 APLP2Q06481 763 aa15.5■□□□□ 0.07
CALR4P-203ENST00000641201 SCRIBQ14160 1630 aa15.49■□□□□ 0.07
CALR4P-203ENST00000641201 BICRAQ9NZM4 1560 aa15.48■□□□□ 0.07
CALR4P-203ENST00000641201 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
CALR4P-203ENST00000641201 ACIN1Q9UKV3 1341 aaKnown RBP15.4■□□□□ 0.06
CALR4P-203ENST00000641201 ERICH6Q7L0X2 663 aa15.34■□□□□ 0.05
CALR4P-203ENST00000641201 CENPBP07199 599 aaPredicted RBP15.31■□□□□ 0.04
CALR4P-203ENST00000641201 EHMT2Q96KQ7 1210 aa15.25■□□□□ 0.03
CALR4P-203ENST00000641201 NEUROD1Q13562 356 aa15.18■□□□□ 0.02
CALR4P-203ENST00000641201 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
CALR4P-203ENST00000641201 GTF3C3Q9Y5Q9 886 aa15.16■□□□□ 0.02
CALR4P-203ENST00000641201 LOC105371045A0A1W2PR82 267 aa15.15■□□□□ 0.02
CALR4P-203ENST00000641201 NCBP3Q53F19 620 aaKnown RBP15.1■□□□□ 0.01
CALR4P-203ENST00000641201 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
CALR4P-203ENST00000641201 RTN4Q9NQC3 1192 aaKnown RBP15.06■□□□□ 0
CALR4P-203ENST00000641201 DNAJC5BQ9UF47 199 aa15.06■□□□□ 0
CALR4P-203ENST00000641201 CC2D2AQ9P2K1 1620 aa15□□□□□ -0.01
CALR4P-203ENST00000641201 DIEXFQ68CQ4 756 aaKnown RBP14.97□□□□□ -0.01
CALR4P-203ENST00000641201 CECR2Q9BXF3 1484 aa14.87□□□□□ -0.03
CALR4P-203ENST00000641201 CLSPNQ9HAW4 1339 aa14.87□□□□□ -0.03
CALR4P-203ENST00000641201 BAZ1AQ9NRL2 1556 aaPredicted RBP14.85□□□□□ -0.03
CALR4P-203ENST00000641201 SMARCA4P51532 1647 aa14.85□□□□□ -0.03
CALR4P-203ENST00000641201 CCER1Q8TC90 406 aaPredicted RBP14.8□□□□□ -0.04
CALR4P-203ENST00000641201 TRIM41Q8WV44 630 aa14.79□□□□□ -0.04
CALR4P-203ENST00000641201 SMARCA2P51531 1590 aa14.76□□□□□ -0.05
CALR4P-203ENST00000641201 NCAPD3P42695 1498 aa14.73□□□□□ -0.05
CALR4P-203ENST00000641201 ATAD2BQ9ULI0 1458 aa14.73□□□□□ -0.05
CALR4P-203ENST00000641201 BCL11AQ9H165 835 aa14.73□□□□□ -0.05
CALR4P-203ENST00000641201 PEG3Q9GZU2 1588 aa14.72□□□□□ -0.05
CALR4P-203ENST00000641201 MROH2BQ7Z745 1585 aa14.71□□□□□ -0.05
CALR4P-203ENST00000641201 HMGXB3Q12766 1538 aa14.7□□□□□ -0.06
CALR4P-203ENST00000641201 ANP32EQ9BTT0 268 aa14.69□□□□□ -0.06
CALR4P-203ENST00000641201 ZNF316A6NFI3 1004 aaPredicted RBP14.69□□□□□ -0.06
CALR4P-203ENST00000641201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.66□□□□□ -0.06
CALR4P-203ENST00000641201 BAZ1BQ9UIG0 1483 aaKnown RBP14.63□□□□□ -0.07
CALR4P-203ENST00000641201 EIF5BO60841 1220 aaKnown RBP14.6□□□□□ -0.07
CALR4P-203ENST00000641201 ARXQ96QS3 562 aa14.6□□□□□ -0.07
CALR4P-203ENST00000641201 WIZO95785 1651 aa14.57□□□□□ -0.08
CALR4P-203ENST00000641201 TIMELESSQ9UNS1 1208 aa14.56□□□□□ -0.08
CALR4P-203ENST00000641201 RSF1Q96T23 1441 aaPredicted RBP14.56□□□□□ -0.08
CALR4P-203ENST00000641201 WRNQ14191 1432 aaPredicted RBP eCLIP14.51□□□□□ -0.09
CALR4P-203ENST00000641201 FAM9AQ8IZU1 332 aaPredicted RBP14.51□□□□□ -0.09
CALR4P-203ENST00000641201 YTHDC1Q96MU7 727 aaKnown RBP14.5□□□□□ -0.09
CALR4P-203ENST00000641201 AMER1Q5JTC6 1135 aaPredicted RBP14.46□□□□□ -0.09
CALR4P-203ENST00000641201 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.1
CALR4P-203ENST00000641201 MIER1Q8N108 512 aa14.45□□□□□ -0.1
CALR4P-203ENST00000641201 SUPT16HQ9Y5B9 1047 aaKnown RBP14.44□□□□□ -0.1
CALR4P-203ENST00000641201 TSHZ2Q9NRE2 1034 aa14.42□□□□□ -0.1
CALR4P-203ENST00000641201 LAMC3Q9Y6N6 1575 aa14.37□□□□□ -0.11
CALR4P-203ENST00000641201 CSRNP3Q8WYN3 585 aa14.36□□□□□ -0.11
CALR4P-203ENST00000641201 KLHL34Q8N239 644 aa14.35□□□□□ -0.11
CALR4P-203ENST00000641201 RANGAP1P46060 587 aaPredicted RBP14.34□□□□□ -0.11
CALR4P-203ENST00000641201 NESP48681 1621 aa14.3□□□□□ -0.12
CALR4P-203ENST00000641201 CADPSQ9ULU8 1353 aa14.29□□□□□ -0.12
CALR4P-203ENST00000641201 ERCC6Q03468 1493 aa14.28□□□□□ -0.12
CALR4P-203ENST00000641201 TULP1O00294 542 aaPredicted RBP14.27□□□□□ -0.13
CALR4P-203ENST00000641201 PLEKHG5O94827 1062 aa14.27□□□□□ -0.13
CALR4P-203ENST00000641201 MYT1LQ9UL68 1186 aa14.27□□□□□ -0.13
CALR4P-203ENST00000641201 KCNA4P22459 653 aa14.26□□□□□ -0.13
CALR4P-203ENST00000641201 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
CALR4P-203ENST00000641201 CCDC88BA6NC98 1476 aa14.24□□□□□ -0.13
CALR4P-203ENST00000641201 CFTRP13569 1480 aa14.22□□□□□ -0.13
CALR4P-203ENST00000641201 PRDM2Q13029 1718 aa14.21□□□□□ -0.13
CALR4P-203ENST00000641201 KIF21AQ7Z4S6 1674 aa14.2□□□□□ -0.14
CALR4P-203ENST00000641201 CEP162Q5TB80 1403 aa14.18□□□□□ -0.14
CALR4P-203ENST00000641201 TNIKQ9UKE5 1360 aa14.18□□□□□ -0.14
CALR4P-203ENST00000641201 CUX2O14529 1486 aa14.16□□□□□ -0.14
CALR4P-203ENST00000641201 THOC2Q8NI27 1593 aaKnown RBP14.15□□□□□ -0.14
CALR4P-203ENST00000641201 FANCD2Q9BXW9 1451 aa14.13□□□□□ -0.15
CALR4P-203ENST00000641201 CEP164Q9UPV0 1460 aa14.13□□□□□ -0.15
CALR4P-203ENST00000641201 EEA1Q15075 1411 aa14.12□□□□□ -0.15
CALR4P-203ENST00000641201 HOMEZQ8IX15 550 aa14.12□□□□□ -0.15
CALR4P-203ENST00000641201 MRC2Q9UBG0 1479 aa14.1□□□□□ -0.15
CALR4P-203ENST00000641201 RBM19Q9Y4C8 960 aaKnown RBP14.09□□□□□ -0.15
CALR4P-203ENST00000641201 WDR62O43379 1518 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms