RNA–Protein interactions for RNA: ENST00000640352.1

CNTN2-231, Transcript of contactin 2, human

TSL 5

Gene CNTN2, Length 4,000 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTN2-231	ENST00000640352	NISCH	Q9Y2I1	1504 aa		17.23	■□□□□ 0.35
CNTN2-231	ENST00000640352	DCAF8L2	P0C7V8	631 aa		16.29	■□□□□ 0.2
CNTN2-231	ENST00000640352	ABCC9	O60706	1549 aa		15.33	■□□□□ 0.04
CNTN2-231	ENST00000640352	SHROOM4	Q9ULL8	1493 aa		15.3	■□□□□ 0.04
CNTN2-231	ENST00000640352	PABPN1	Q86U42	306 aa	Known RBP eCLIP	14.87	□□□□□ -0.03
CNTN2-231	ENST00000640352	SUPT5H	O00267	1087 aa	Known RBP	14.8	□□□□□ -0.04
CNTN2-231	ENST00000640352	CCDC180	Q9P1Z9	1646 aa		14.8	□□□□□ -0.04
CNTN2-231	ENST00000640352	PELP1	Q8IZL8	1130 aa	Known RBP	14.45	□□□□□ -0.1
CNTN2-231	ENST00000640352	MYT1	Q01538	1121 aa		14.34	□□□□□ -0.11
CNTN2-231	ENST00000640352	PCGF6	Q9BYE7	350 aa		14.26	□□□□□ -0.13
CNTN2-231	ENST00000640352	SCRIB	Q14160	1630 aa		14.25	□□□□□ -0.13
CNTN2-231	ENST00000640352	ZCCHC6	Q5VYS8	1495 aa	Known RBP	14.25	□□□□□ -0.13
CNTN2-231	ENST00000640352	RB1CC1	Q8TDY2	1594 aa		14.22	□□□□□ -0.13
CNTN2-231	ENST00000640352	PPARGC1B	Q86YN6	1023 aa	Known RBP	14.19	□□□□□ -0.14
CNTN2-231	ENST00000640352	EHMT2	Q96KQ7	1210 aa		14.19	□□□□□ -0.14
CNTN2-231	ENST00000640352	NACAD	O15069	1562 aa		14.13	□□□□□ -0.15
CNTN2-231	ENST00000640352	HRC	P23327	699 aa		14.13	□□□□□ -0.15
CNTN2-231	ENST00000640352	CHIC1	Q5VXU3	224 aa		14.08	□□□□□ -0.15
CNTN2-231	ENST00000640352	MYO15B	Q96JP2	1530 aa		14.03	□□□□□ -0.16
CNTN2-231	ENST00000640352	LOC105371045	A0A1W2PR82	267 aa		13.99	□□□□□ -0.17
CNTN2-231	ENST00000640352	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.91	□□□□□ -0.18
CNTN2-231	ENST00000640352	DCAF1	Q9Y4B6	1507 aa		13.87	□□□□□ -0.19
CNTN2-231	ENST00000640352	DNAJC5B	Q9UF47	199 aa		13.83	□□□□□ -0.2
CNTN2-231	ENST00000640352	CECR2	Q9BXF3	1484 aa		13.78	□□□□□ -0.2
CNTN2-231	ENST00000640352	RANGAP1	P46060	587 aa	Predicted RBP	13.75	□□□□□ -0.21
CNTN2-231	ENST00000640352	TRIM41	Q8WV44	630 aa		13.62	□□□□□ -0.23
CNTN2-231	ENST00000640352	TRIM26	Q12899	539 aa	Predicted RBP	13.58	□□□□□ -0.24
CNTN2-231	ENST00000640352	BICRA	Q9NZM4	1560 aa		13.58	□□□□□ -0.24
CNTN2-231	ENST00000640352	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.56	□□□□□ -0.24
CNTN2-231	ENST00000640352	UNC13A	Q9UPW8	1703 aa		13.53	□□□□□ -0.24
CNTN2-231	ENST00000640352	RSF1	Q96T23	1441 aa	Predicted RBP	13.52	□□□□□ -0.25
CNTN2-231	ENST00000640352	ZEB1	P37275	1124 aa	Predicted RBP	13.49	□□□□□ -0.25
CNTN2-231	ENST00000640352	MROH2B	Q7Z745	1585 aa		13.49	□□□□□ -0.25
CNTN2-231	ENST00000640352	FBLN2	P98095	1184 aa		13.47	□□□□□ -0.25
CNTN2-231	ENST00000640352	BAZ1B	Q9UIG0	1483 aa	Known RBP	13.42	□□□□□ -0.26
CNTN2-231	ENST00000640352	EIF4G1	Q04637	1599 aa	Known RBP	13.4	□□□□□ -0.26
CNTN2-231	ENST00000640352	CENPB	P07199	599 aa	Predicted RBP	13.4	□□□□□ -0.26
CNTN2-231	ENST00000640352	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.35	□□□□□ -0.27
CNTN2-231	ENST00000640352	SCAF1	Q9H7N4	1312 aa	Known RBP	13.34	□□□□□ -0.27
CNTN2-231	ENST00000640352	CC2D2A	Q9P2K1	1620 aa		13.34	□□□□□ -0.27
CNTN2-231	ENST00000640352	ERICH6	Q7L0X2	663 aa		13.33	□□□□□ -0.28
CNTN2-231	ENST00000640352	UBTF	P17480	764 aa	Known RBP	13.33	□□□□□ -0.28
CNTN2-231	ENST00000640352	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	13.33	□□□□□ -0.28
CNTN2-231	ENST00000640352	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.31	□□□□□ -0.28
CNTN2-231	ENST00000640352	WIZ	O95785	1651 aa		13.29	□□□□□ -0.28
CNTN2-231	ENST00000640352	ATAD2B	Q9ULI0	1458 aa		13.29	□□□□□ -0.28
CNTN2-231	ENST00000640352	CCER1	Q8TC90	406 aa	Predicted RBP	13.28	□□□□□ -0.28
CNTN2-231	ENST00000640352	ERCC6	Q03468	1493 aa		13.28	□□□□□ -0.28
CNTN2-231	ENST00000640352	SMARCA4	P51532	1647 aa		13.23	□□□□□ -0.29
CNTN2-231	ENST00000640352	YTHDC1	Q96MU7	727 aa	Known RBP	13.2	□□□□□ -0.3
CNTN2-231	ENST00000640352	SMARCA2	P51531	1590 aa		13.18	□□□□□ -0.3
CNTN2-231	ENST00000640352	NES	P48681	1621 aa		13.17	□□□□□ -0.3
CNTN2-231	ENST00000640352	ARID3C	A6NKF2	412 aa		13.16	□□□□□ -0.3
CNTN2-231	ENST00000640352	CCDC88B	A6NC98	1476 aa		13.15	□□□□□ -0.3
CNTN2-231	ENST00000640352	P3H3	Q8IVL6	736 aa		13.13	□□□□□ -0.31
CNTN2-231	ENST00000640352	NCAPD3	P42695	1498 aa		13.12	□□□□□ -0.31
CNTN2-231	ENST00000640352	APLP2	Q06481	763 aa		13.12	□□□□□ -0.31
CNTN2-231	ENST00000640352	NEUROD1	Q13562	356 aa		13.12	□□□□□ -0.31
CNTN2-231	ENST00000640352	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.09	□□□□□ -0.31
CNTN2-231	ENST00000640352	GTF3C3	Q9Y5Q9	886 aa		13.07	□□□□□ -0.32
CNTN2-231	ENST00000640352	CADPS	Q9ULU8	1353 aa		13.07	□□□□□ -0.32
CNTN2-231	ENST00000640352	DIEXF	Q68CQ4	756 aa	Known RBP	13.04	□□□□□ -0.32
CNTN2-231	ENST00000640352	ACIN1	Q9UKV3	1341 aa	Known RBP	13.03	□□□□□ -0.32
CNTN2-231	ENST00000640352	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.01	□□□□□ -0.33
CNTN2-231	ENST00000640352	TDRD9	Q8NDG6	1382 aa	Known RBP	13	□□□□□ -0.33
CNTN2-231	ENST00000640352	PDS5B	Q9NTI5	1447 aa		12.98	□□□□□ -0.33
CNTN2-231	ENST00000640352	ABCC8	Q09428	1581 aa		12.97	□□□□□ -0.33
CNTN2-231	ENST00000640352	TOP2A	P11388	1531 aa	Known RBP	12.95	□□□□□ -0.34
CNTN2-231	ENST00000640352	CSRNP3	Q8WYN3	585 aa		12.94	□□□□□ -0.34
CNTN2-231	ENST00000640352	WRN	Q14191	1432 aa	Predicted RBP eCLIP	12.94	□□□□□ -0.34
CNTN2-231	ENST00000640352	FANCD2	Q9BXW9	1451 aa		12.92	□□□□□ -0.34
CNTN2-231	ENST00000640352	HMGXB3	Q12766	1538 aa		12.91	□□□□□ -0.34
CNTN2-231	ENST00000640352	BCL11A	Q9H165	835 aa		12.91	□□□□□ -0.34
CNTN2-231	ENST00000640352	CEP164	Q9UPV0	1460 aa		12.85	□□□□□ -0.35
CNTN2-231	ENST00000640352	PRKCSH	P14314	528 aa	Predicted RBP	12.84	□□□□□ -0.35
CNTN2-231	ENST00000640352	SOGA1	O94964	1423 aa		12.83	□□□□□ -0.36
CNTN2-231	ENST00000640352	RAD54L2	Q9Y4B4	1467 aa		12.81	□□□□□ -0.36
CNTN2-231	ENST00000640352	ITGAE	P38570	1179 aa		12.81	□□□□□ -0.36
CNTN2-231	ENST00000640352	CUX2	O14529	1486 aa		12.8	□□□□□ -0.36
CNTN2-231	ENST00000640352	PEG3	Q9GZU2	1588 aa		12.8	□□□□□ -0.36
CNTN2-231	ENST00000640352	MYT1L	Q9UL68	1186 aa		12.79	□□□□□ -0.36
CNTN2-231	ENST00000640352	AQR	O60306	1485 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
CNTN2-231	ENST00000640352	MIER1	Q8N108	512 aa		12.76	□□□□□ -0.37
CNTN2-231	ENST00000640352	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.75	□□□□□ -0.37
CNTN2-231	ENST00000640352	CFTR	P13569	1480 aa		12.74	□□□□□ -0.37
CNTN2-231	ENST00000640352	CYB5RL	Q6IPT4	315 aa		12.72	□□□□□ -0.37
CNTN2-231	ENST00000640352	RUSC2	Q8N2Y8	1516 aa		12.72	□□□□□ -0.37
CNTN2-231	ENST00000640352	SLC24A1	O60721	1099 aa		12.69	□□□□□ -0.38
CNTN2-231	ENST00000640352	KCNH8	Q96L42	1107 aa		12.68	□□□□□ -0.38
CNTN2-231	ENST00000640352	LAMC3	Q9Y6N6	1575 aa		12.68	□□□□□ -0.38
CNTN2-231	ENST00000640352	NEFL	P07196	543 aa		12.68	□□□□□ -0.38
CNTN2-231	ENST00000640352	TRH	P20396	242 aa	Predicted RBP	12.68	□□□□□ -0.38
CNTN2-231	ENST00000640352	FGD5	Q6ZNL6	1462 aa		12.67	□□□□□ -0.38
CNTN2-231	ENST00000640352	KIF27	Q86VH2	1401 aa		12.67	□□□□□ -0.38
CNTN2-231	ENST00000640352	CEP162	Q5TB80	1403 aa		12.66	□□□□□ -0.38
CNTN2-231	ENST00000640352	MRC2	Q9UBG0	1479 aa		12.65	□□□□□ -0.38
CNTN2-231	ENST00000640352	OSCAR	Q8IYS5	282 aa		12.65	□□□□□ -0.39
CNTN2-231	ENST00000640352	CARMIL1	Q5VZK9	1371 aa		12.64	□□□□□ -0.39
CNTN2-231	ENST00000640352	PLPPR3	Q6T4P5	718 aa		12.63	□□□□□ -0.39
CNTN2-231	ENST00000640352	NPM1	P06748	294 aa	Known RBP eCLIP	12.62	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms