RNA–Protein interactions for RNA: ENST00000639971.1

CNTN2-228, Transcript of contactin 2, humanhuman

TSL 5

Gene CNTN2, Length 4,497 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN2-228ENST00000639971 DCAF8L2P0C7V8 631 aa21.25■□□□□ 0.99
CNTN2-228ENST00000639971 NISCHQ9Y2I1 1504 aa21.14■□□□□ 0.97
CNTN2-228ENST00000639971 ABCC9O60706 1549 aa19.15■□□□□ 0.66
CNTN2-228ENST00000639971 SHROOM4Q9ULL8 1493 aa19.15■□□□□ 0.66
CNTN2-228ENST00000639971 SUPT5HO00267 1087 aaKnown RBP18.94■□□□□ 0.62
CNTN2-228ENST00000639971 PABPN1Q86U42 306 aaKnown RBP eCLIP18.67■□□□□ 0.58
CNTN2-228ENST00000639971 FAM9AQ8IZU1 332 aaPredicted RBP18.41■□□□□ 0.54
CNTN2-228ENST00000639971 EHMT2Q96KQ7 1210 aa18.1■□□□□ 0.49
CNTN2-228ENST00000639971 PCGF6Q9BYE7 350 aa17.96■□□□□ 0.47
CNTN2-228ENST00000639971 CHIC1Q5VXU3 224 aa17.89■□□□□ 0.45
CNTN2-228ENST00000639971 CCDC180Q9P1Z9 1646 aa17.83■□□□□ 0.45
CNTN2-228ENST00000639971 HRCP23327 699 aa17.8■□□□□ 0.44
CNTN2-228ENST00000639971 RANGAP1P46060 587 aaPredicted RBP17.8■□□□□ 0.44
CNTN2-228ENST00000639971 APLP2Q06481 763 aa17.78■□□□□ 0.44
CNTN2-228ENST00000639971 RB1CC1Q8TDY2 1594 aa17.78■□□□□ 0.44
CNTN2-228ENST00000639971 ATP1B4Q9UN42 357 aaPredicted RBP17.74■□□□□ 0.43
CNTN2-228ENST00000639971 TTBK1Q5TCY1 1321 aaPredicted RBP17.72■□□□□ 0.43
CNTN2-228ENST00000639971 TRIM41Q8WV44 630 aa17.68■□□□□ 0.42
CNTN2-228ENST00000639971 SCRIBQ14160 1630 aa17.68■□□□□ 0.42
CNTN2-228ENST00000639971 ZCCHC6Q5VYS8 1495 aaKnown RBP17.67■□□□□ 0.42
CNTN2-228ENST00000639971 FBLN2P98095 1184 aa17.66■□□□□ 0.42
CNTN2-228ENST00000639971 LOC105371045A0A1W2PR82 267 aa17.55■□□□□ 0.4
CNTN2-228ENST00000639971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.53■□□□□ 0.4
CNTN2-228ENST00000639971 HNRNPUL2Q1KMD3 747 aaKnown RBP17.53■□□□□ 0.4
CNTN2-228ENST00000639971 UBTFP17480 764 aaKnown RBP17.52■□□□□ 0.4
CNTN2-228ENST00000639971 NACADO15069 1562 aa17.5■□□□□ 0.39
CNTN2-228ENST00000639971 MYT1LQ9UL68 1186 aa17.49■□□□□ 0.39
CNTN2-228ENST00000639971 PPARGC1BQ86YN6 1023 aaKnown RBP17.46■□□□□ 0.39
CNTN2-228ENST00000639971 MYO15BQ96JP2 1530 aa17.41■□□□□ 0.38
CNTN2-228ENST00000639971 TRIM26Q12899 539 aaPredicted RBP17.41■□□□□ 0.38
CNTN2-228ENST00000639971 ZEB1P37275 1124 aaPredicted RBP17.31■□□□□ 0.36
CNTN2-228ENST00000639971 ERCC6Q03468 1493 aa17.25■□□□□ 0.35
CNTN2-228ENST00000639971 DCAF1Q9Y4B6 1507 aa17.16■□□□□ 0.34
CNTN2-228ENST00000639971 NPM1P06748 294 aaKnown RBP eCLIP17.15■□□□□ 0.34
CNTN2-228ENST00000639971 CHMP7Q8WUX9 453 aaPredicted RBP17.04■□□□□ 0.32
CNTN2-228ENST00000639971 CECR2Q9BXF3 1484 aa17■□□□□ 0.31
CNTN2-228ENST00000639971 CCER1Q8TC90 406 aaPredicted RBP16.99■□□□□ 0.31
CNTN2-228ENST00000639971 BAZ1BQ9UIG0 1483 aaKnown RBP16.98■□□□□ 0.31
CNTN2-228ENST00000639971 TRHP20396 242 aaPredicted RBP16.9■□□□□ 0.3
CNTN2-228ENST00000639971 PELP1Q8IZL8 1130 aaKnown RBP16.85■□□□□ 0.29
CNTN2-228ENST00000639971 RSF1Q96T23 1441 aaPredicted RBP16.81■□□□□ 0.28
CNTN2-228ENST00000639971 ARID3CA6NKF2 412 aa16.81■□□□□ 0.28
CNTN2-228ENST00000639971 ESF1Q9H501 851 aaKnown RBP16.76■□□□□ 0.27
CNTN2-228ENST00000639971 CENPBP07199 599 aaPredicted RBP16.75■□□□□ 0.27
CNTN2-228ENST00000639971 PDS5BQ9NTI5 1447 aa16.75■□□□□ 0.27
CNTN2-228ENST00000639971 P3H3Q8IVL6 736 aa16.74■□□□□ 0.27
CNTN2-228ENST00000639971 PLPPR3Q6T4P5 718 aa16.7■□□□□ 0.26
CNTN2-228ENST00000639971 BAZ1AQ9NRL2 1556 aaPredicted RBP16.68■□□□□ 0.26
CNTN2-228ENST00000639971 ITGAEP38570 1179 aa16.67■□□□□ 0.26
CNTN2-228ENST00000639971 CDK11AQ9UQ88 783 aaPredicted RBP16.67■□□□□ 0.26
CNTN2-228ENST00000639971 DNAJC5BQ9UF47 199 aa16.63■□□□□ 0.25
CNTN2-228ENST00000639971 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
CNTN2-228ENST00000639971 DIEXFQ68CQ4 756 aaKnown RBP16.57■□□□□ 0.24
CNTN2-228ENST00000639971 CSRNP3Q8WYN3 585 aa16.57■□□□□ 0.24
CNTN2-228ENST00000639971 ZNF777Q9ULD5 760 aaPredicted RBP16.53■□□□□ 0.24
CNTN2-228ENST00000639971 BCANQ96GW7 911 aa16.5■□□□□ 0.23
CNTN2-228ENST00000639971 YTHDC1Q96MU7 727 aaKnown RBP16.5■□□□□ 0.23
CNTN2-228ENST00000639971 OSCARQ8IYS5 282 aa16.5■□□□□ 0.23
CNTN2-228ENST00000639971 KCNH8Q96L42 1107 aa16.49■□□□□ 0.23
CNTN2-228ENST00000639971 SCAF1Q9H7N4 1312 aaKnown RBP16.47■□□□□ 0.23
CNTN2-228ENST00000639971 CADPSQ9ULU8 1353 aa16.47■□□□□ 0.23
CNTN2-228ENST00000639971 FAM50AQ14320 339 aaKnown RBP16.45■□□□□ 0.22
CNTN2-228ENST00000639971 ACIN1Q9UKV3 1341 aaKnown RBP16.44■□□□□ 0.22
CNTN2-228ENST00000639971 ARID4BQ4LE39 1312 aaPredicted RBP16.43■□□□□ 0.22
CNTN2-228ENST00000639971 ATAD2BQ9ULI0 1458 aa16.4■□□□□ 0.22
CNTN2-228ENST00000639971 CYB5RLQ6IPT4 315 aa16.4■□□□□ 0.22
CNTN2-228ENST00000639971 GTF3C3Q9Y5Q9 886 aa16.39■□□□□ 0.21
CNTN2-228ENST00000639971 AEBP2Q6ZN18 517 aaPredicted RBP16.36■□□□□ 0.21
CNTN2-228ENST00000639971 EIF4G1Q04637 1599 aaKnown RBP16.36■□□□□ 0.21
CNTN2-228ENST00000639971 MROH2BQ7Z745 1585 aa16.35■□□□□ 0.21
CNTN2-228ENST00000639971 STAG3Q9UJ98 1225 aa16.35■□□□□ 0.21
CNTN2-228ENST00000639971 CEP164Q9UPV0 1460 aa16.33■□□□□ 0.2
CNTN2-228ENST00000639971 PLEKHD1A6NEE1 506 aa16.32■□□□□ 0.2
CNTN2-228ENST00000639971 NEUROD1Q13562 356 aa16.32■□□□□ 0.2
CNTN2-228ENST00000639971 WRNQ14191 1432 aaPredicted RBP eCLIP16.32■□□□□ 0.2
CNTN2-228ENST00000639971 ZNF316A6NFI3 1004 aaPredicted RBP16.32■□□□□ 0.2
CNTN2-228ENST00000639971 TRIM52Q96A61 297 aa16.31■□□□□ 0.2
CNTN2-228ENST00000639971 TDRD9Q8NDG6 1382 aaKnown RBP16.31■□□□□ 0.2
CNTN2-228ENST00000639971 SOGA1O94964 1423 aa16.27■□□□□ 0.2
CNTN2-228ENST00000639971 KIF27Q86VH2 1401 aa16.27■□□□□ 0.19
CNTN2-228ENST00000639971 CC2D2AQ9P2K1 1620 aa16.24■□□□□ 0.19
CNTN2-228ENST00000639971 CEP162Q5TB80 1403 aa16.24■□□□□ 0.19
CNTN2-228ENST00000639971 SLC4A1APQ9BWU0 796 aaKnown RBP16.22■□□□□ 0.19
CNTN2-228ENST00000639971 NCAPD3P42695 1498 aa16.2■□□□□ 0.18
CNTN2-228ENST00000639971 FANCD2Q9BXW9 1451 aa16.19■□□□□ 0.18
CNTN2-228ENST00000639971 WIZO95785 1651 aa16.19■□□□□ 0.18
CNTN2-228ENST00000639971 CUX2O14529 1486 aa16.19■□□□□ 0.18
CNTN2-228ENST00000639971 CHGAP10645 457 aaKnown RBP16.18■□□□□ 0.18
CNTN2-228ENST00000639971 TSPY4P0CV99 314 aa16.17■□□□□ 0.18
CNTN2-228ENST00000639971 TSPY10P0CW01 314 aa16.17■□□□□ 0.18
CNTN2-228ENST00000639971 MYT1Q01538 1121 aa16.17■□□□□ 0.18
CNTN2-228ENST00000639971 TNIKQ9UKE5 1360 aa16.16■□□□□ 0.18
CNTN2-228ENST00000639971 POLR3GLQ9BT43 218 aa16.13■□□□□ 0.17
CNTN2-228ENST00000639971 CCDC88BA6NC98 1476 aa16.13■□□□□ 0.17
CNTN2-228ENST00000639971 EEA1Q15075 1411 aa16.13■□□□□ 0.17
CNTN2-228ENST00000639971 SMARCA4P51532 1647 aa16.12■□□□□ 0.17
CNTN2-228ENST00000639971 CARMIL2Q6F5E8 1435 aa16.11■□□□□ 0.17
CNTN2-228ENST00000639971 ABCC8Q09428 1581 aa16.1■□□□□ 0.17
CNTN2-228ENST00000639971 CARMIL1Q5VZK9 1371 aa16.07■□□□□ 0.16
CNTN2-228ENST00000639971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms