RNA–Protein interactions for RNA: ENST00000639940.1

STRADA-242, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 5

Gene STRADA, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-242ENST00000639940 AEBP2Q6ZN18 517 aaPredicted RBP21.49■■□□□ 1.03
STRADA-242ENST00000639940 CHIC1Q5VXU3 224 aa21.09■□□□□ 0.97
STRADA-242ENST00000639940 PHF23Q9BUL5 403 aaPredicted RBP18.56■□□□□ 0.56
STRADA-242ENST00000639940 SENP3Q9H4L4 574 aaPredicted RBP18.23■□□□□ 0.51
STRADA-242ENST00000639940 PLPPR3Q6T4P5 718 aa17.19■□□□□ 0.34
STRADA-242ENST00000639940 FOXD1Q16676 465 aa16.91■□□□□ 0.3
STRADA-242ENST00000639940 ADRA2BP18089 450 aa16.37■□□□□ 0.21
STRADA-242ENST00000639940 PPP6R1Q9UPN7 881 aa16.35■□□□□ 0.21
STRADA-242ENST00000639940 PIAS4Q8N2W9 510 aaPredicted RBP15.99■□□□□ 0.15
STRADA-242ENST00000639940 MSH5O43196 834 aa15.55■□□□□ 0.08
STRADA-242ENST00000639940 PPP4R3CPQ6ZMV5 832 aa15.17■□□□□ 0.02
STRADA-242ENST00000639940 SCAF1Q9H7N4 1312 aaKnown RBP14.98□□□□□ -0.01
STRADA-242ENST00000639940 KCNA4P22459 653 aa14.93□□□□□ -0.02
STRADA-242ENST00000639940 MAPK8IP2Q13387 824 aaPredicted RBP14.82□□□□□ -0.04
STRADA-242ENST00000639940 NCBP3Q53F19 620 aaKnown RBP14.81□□□□□ -0.04
STRADA-242ENST00000639940 CNKSR2Q8WXI2 1034 aa14.71□□□□□ -0.05
STRADA-242ENST00000639940 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
STRADA-242ENST00000639940 DMRT2Q9Y5R5 561 aa14.55□□□□□ -0.08
STRADA-242ENST00000639940 RNF216Q9NWF9 866 aaPredicted RBP14.39□□□□□ -0.11
STRADA-242ENST00000639940 HOXD11P31277 338 aaPredicted RBP14.3□□□□□ -0.12
STRADA-242ENST00000639940 SLC4A1APQ9BWU0 796 aaKnown RBP14.25□□□□□ -0.13
STRADA-242ENST00000639940 NISCHQ9Y2I1 1504 aa14.2□□□□□ -0.14
STRADA-242ENST00000639940 ABCC9O60706 1549 aa14.13□□□□□ -0.15
STRADA-242ENST00000639940 DNAJC5BQ9UF47 199 aa14.1□□□□□ -0.15
STRADA-242ENST00000639940 DCAF8L1A6NGE4 600 aa14□□□□□ -0.17
STRADA-242ENST00000639940 POTEDQ86YR6 584 aa13.98□□□□□ -0.17
STRADA-242ENST00000639940 EHMT2Q96KQ7 1210 aa13.98□□□□□ -0.17
STRADA-242ENST00000639940 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
STRADA-242ENST00000639940 SLC4A2P04920 1241 aa13.73□□□□□ -0.21
STRADA-242ENST00000639940 ZBTB22O15209 634 aa13.71□□□□□ -0.21
STRADA-242ENST00000639940 FOXD4L1Q9NU39 408 aa13.71□□□□□ -0.21
STRADA-242ENST00000639940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.67□□□□□ -0.22
STRADA-242ENST00000639940 DNAJC5Q9H3Z4 198 aa13.52□□□□□ -0.25
STRADA-242ENST00000639940 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
STRADA-242ENST00000639940 U3KPZ7 1027 aaPredicted RBP13.43□□□□□ -0.26
STRADA-242ENST00000639940 RNF39Q9H2S5 420 aa13.32□□□□□ -0.28
STRADA-242ENST00000639940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.31□□□□□ -0.28
STRADA-242ENST00000639940 HNRNPUL2Q1KMD3 747 aaKnown RBP13.31□□□□□ -0.28
STRADA-242ENST00000639940 SAMD1Q6SPF0 538 aaPredicted RBP13.26□□□□□ -0.29
STRADA-242ENST00000639940 ATXN8OSP0DMR3 200 aa13.21□□□□□ -0.29
STRADA-242ENST00000639940 C1QBPQ07021 282 aaKnown RBP13.18□□□□□ -0.3
STRADA-242ENST00000639940 APLP2Q06481 763 aa13.15□□□□□ -0.3
STRADA-242ENST00000639940 CCDC180Q9P1Z9 1646 aa13.14□□□□□ -0.31
STRADA-242ENST00000639940 ATF5Q9Y2D1 282 aaPredicted RBP13.1□□□□□ -0.31
STRADA-242ENST00000639940 SPINK5Q9NQ38 1064 aaPredicted RBP13.04□□□□□ -0.32
STRADA-242ENST00000639940 CAPN15O75808 1086 aa13.01□□□□□ -0.33
STRADA-242ENST00000639940 PABPN1Q86U42 306 aaKnown RBP eCLIP13.01□□□□□ -0.33
STRADA-242ENST00000639940 TRHP20396 242 aaPredicted RBP12.98□□□□□ -0.33
STRADA-242ENST00000639940 CACNB1Q02641 598 aaPredicted RBP12.95□□□□□ -0.34
STRADA-242ENST00000639940 ZNF219Q9P2Y4 722 aaPredicted RBP12.95□□□□□ -0.34
STRADA-242ENST00000639940 RB1CC1Q8TDY2 1594 aa12.94□□□□□ -0.34
STRADA-242ENST00000639940 UNC13AQ9UPW8 1703 aa12.78□□□□□ -0.36
STRADA-242ENST00000639940 CECR2Q9BXF3 1484 aa12.78□□□□□ -0.36
STRADA-242ENST00000639940 POLA2Q14181 598 aa12.77□□□□□ -0.37
STRADA-242ENST00000639940 ABCB7O75027 752 aa12.76□□□□□ -0.37
STRADA-242ENST00000639940 DSG3P32926 999 aa12.73□□□□□ -0.37
STRADA-242ENST00000639940 CC2D2AQ9P2K1 1620 aa12.7□□□□□ -0.38
STRADA-242ENST00000639940 BICRAQ9NZM4 1560 aa12.69□□□□□ -0.38
STRADA-242ENST00000639940 TRIM41Q8WV44 630 aa12.63□□□□□ -0.39
STRADA-242ENST00000639940 NACADO15069 1562 aa12.6□□□□□ -0.39
STRADA-242ENST00000639940 FBLN2P98095 1184 aa12.57□□□□□ -0.4
STRADA-242ENST00000639940 ZBTB12Q9Y330 459 aaPredicted RBP12.54□□□□□ -0.4
STRADA-242ENST00000639940 MKRN4PQ13434 485 aaPredicted RBP12.52□□□□□ -0.41
STRADA-242ENST00000639940 CUX2O14529 1486 aa12.46□□□□□ -0.42
STRADA-242ENST00000639940 FKBP8Q14318 412 aa12.44□□□□□ -0.42
STRADA-242ENST00000639940 DCAF8L2P0C7V8 631 aa12.43□□□□□ -0.42
STRADA-242ENST00000639940 EIF4G1Q04637 1599 aaKnown RBP12.41□□□□□ -0.42
STRADA-242ENST00000639940 SPDYE4A6NLX3 237 aa12.32□□□□□ -0.44
STRADA-242ENST00000639940 OSCARQ8IYS5 282 aa12.31□□□□□ -0.44
STRADA-242ENST00000639940 SHROOM4Q9ULL8 1493 aa12.24□□□□□ -0.45
STRADA-242ENST00000639940 SPDYE2BA6NHP3 402 aa12.22□□□□□ -0.45
STRADA-242ENST00000639940 SPDYE6P0CI01 402 aa12.22□□□□□ -0.45
STRADA-242ENST00000639940 SPDYE2Q495Y8 402 aa12.22□□□□□ -0.45
STRADA-242ENST00000639940 ZNF692Q9BU19 519 aaPredicted RBP12.22□□□□□ -0.45
STRADA-242ENST00000639940 ERCC6Q03468 1493 aa12.21□□□□□ -0.46
STRADA-242ENST00000639940 RBM42Q9BTD8 480 aaKnown RBP12.14□□□□□ -0.47
STRADA-242ENST00000639940 SSUH2Q9Y2M2 353 aa12.11□□□□□ -0.47
STRADA-242ENST00000639940 PROM2Q8N271 834 aa12.07□□□□□ -0.48
STRADA-242ENST00000639940 MYO15BQ96JP2 1530 aa12.06□□□□□ -0.48
STRADA-242ENST00000639940 SCRIBQ14160 1630 aa12.01□□□□□ -0.49
STRADA-242ENST00000639940 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
STRADA-242ENST00000639940 FBXO3Q9UK99 471 aa11.97□□□□□ -0.49
STRADA-242ENST00000639940 THOC2Q8NI27 1593 aaKnown RBP11.93□□□□□ -0.5
STRADA-242ENST00000639940 NESP48681 1621 aa11.89□□□□□ -0.51
STRADA-242ENST00000639940 REM2Q8IYK8 340 aaPredicted RBP11.89□□□□□ -0.51
STRADA-242ENST00000639940 STAG3Q9UJ98 1225 aa11.87□□□□□ -0.51
STRADA-242ENST00000639940 SPDYE1Q8NFV5 336 aaPredicted RBP11.85□□□□□ -0.51
STRADA-242ENST00000639940 CLEC11AQ9Y240 323 aa11.82□□□□□ -0.52
STRADA-242ENST00000639940 ILDR1Q86SU0 546 aaPredicted RBP11.8□□□□□ -0.52
STRADA-242ENST00000639940 SMARCA2P51531 1590 aa11.79□□□□□ -0.52
STRADA-242ENST00000639940 BAZ1AQ9NRL2 1556 aaPredicted RBP11.79□□□□□ -0.52
STRADA-242ENST00000639940 VASPP50552 380 aaPredicted RBP11.79□□□□□ -0.52
STRADA-242ENST00000639940 RIMBP3CA6NJZ7 1639 aa11.78□□□□□ -0.52
STRADA-242ENST00000639940 RIMBP3BA6NNM3 1639 aa11.78□□□□□ -0.52
STRADA-242ENST00000639940 RIMBP3Q9UFD9 1639 aa11.78□□□□□ -0.52
STRADA-242ENST00000639940 PITPNM1O00562 1244 aa11.75□□□□□ -0.53
STRADA-242ENST00000639940 KIF21AQ7Z4S6 1674 aa11.72□□□□□ -0.53
STRADA-242ENST00000639940 PRR29P0C7W0 189 aa11.72□□□□□ -0.53
STRADA-242ENST00000639940 MIER1Q8N108 512 aa11.7□□□□□ -0.54
STRADA-242ENST00000639940 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms