RNA–Protein interactions for RNA: ENST00000639843.1

CNTN2-227, Transcript of contactin 2, humanhuman

TSL 5

Gene CNTN2, Length 2,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN2-227ENST00000639843 NISCHQ9Y2I1 1504 aa21.1■□□□□ 0.97
CNTN2-227ENST00000639843 SHROOM4Q9ULL8 1493 aa18.28■□□□□ 0.52
CNTN2-227ENST00000639843 SUPT5HO00267 1087 aaKnown RBP18.03■□□□□ 0.48
CNTN2-227ENST00000639843 ZCCHC6Q5VYS8 1495 aaKnown RBP17.9■□□□□ 0.46
CNTN2-227ENST00000639843 CCDC180Q9P1Z9 1646 aa17.82■□□□□ 0.44
CNTN2-227ENST00000639843 DCAF8L2P0C7V8 631 aa17.58■□□□□ 0.4
CNTN2-227ENST00000639843 MYO15BQ96JP2 1530 aa17.56■□□□□ 0.4
CNTN2-227ENST00000639843 CHIC1Q5VXU3 224 aa17.56■□□□□ 0.4
CNTN2-227ENST00000639843 HRCP23327 699 aa17.43■□□□□ 0.38
CNTN2-227ENST00000639843 PCGF6Q9BYE7 350 aa17.31■□□□□ 0.36
CNTN2-227ENST00000639843 DCAF1Q9Y4B6 1507 aa17.27■□□□□ 0.35
CNTN2-227ENST00000639843 LOC105371045A0A1W2PR82 267 aa17.08■□□□□ 0.32
CNTN2-227ENST00000639843 PPARGC1BQ86YN6 1023 aaKnown RBP17.06■□□□□ 0.32
CNTN2-227ENST00000639843 ABCC9O60706 1549 aa16.96■□□□□ 0.3
CNTN2-227ENST00000639843 TRIM26Q12899 539 aaPredicted RBP16.89■□□□□ 0.29
CNTN2-227ENST00000639843 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
CNTN2-227ENST00000639843 RSF1Q96T23 1441 aaPredicted RBP16.8■□□□□ 0.28
CNTN2-227ENST00000639843 TRIM41Q8WV44 630 aa16.75■□□□□ 0.27
CNTN2-227ENST00000639843 RB1CC1Q8TDY2 1594 aa16.69■□□□□ 0.26
CNTN2-227ENST00000639843 FAM9AQ8IZU1 332 aaPredicted RBP16.67■□□□□ 0.26
CNTN2-227ENST00000639843 ZEB1P37275 1124 aaPredicted RBP16.62■□□□□ 0.25
CNTN2-227ENST00000639843 EHMT2Q96KQ7 1210 aa16.56■□□□□ 0.24
CNTN2-227ENST00000639843 CECR2Q9BXF3 1484 aa16.47■□□□□ 0.23
CNTN2-227ENST00000639843 MROH2BQ7Z745 1585 aa16.44■□□□□ 0.22
CNTN2-227ENST00000639843 NACADO15069 1562 aa16.43■□□□□ 0.22
CNTN2-227ENST00000639843 WIZO95785 1651 aa16.37■□□□□ 0.21
CNTN2-227ENST00000639843 BAZ1AQ9NRL2 1556 aaPredicted RBP16.28■□□□□ 0.2
CNTN2-227ENST00000639843 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.19
CNTN2-227ENST00000639843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.21■□□□□ 0.19
CNTN2-227ENST00000639843 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.18
CNTN2-227ENST00000639843 CCER1Q8TC90 406 aaPredicted RBP16.2■□□□□ 0.18
CNTN2-227ENST00000639843 PELP1Q8IZL8 1130 aaKnown RBP16.15■□□□□ 0.18
CNTN2-227ENST00000639843 ABCC8Q09428 1581 aa16.12■□□□□ 0.17
CNTN2-227ENST00000639843 TOP2AP11388 1531 aaKnown RBP16.1■□□□□ 0.17
CNTN2-227ENST00000639843 TTBK1Q5TCY1 1321 aaPredicted RBP16.1■□□□□ 0.17
CNTN2-227ENST00000639843 CCDC88BA6NC98 1476 aa16.08■□□□□ 0.16
CNTN2-227ENST00000639843 CEP162Q5TB80 1403 aa16.05■□□□□ 0.16
CNTN2-227ENST00000639843 WRNQ14191 1432 aaPredicted RBP eCLIP16.04■□□□□ 0.16
CNTN2-227ENST00000639843 SMARCA4P51532 1647 aa16.04■□□□□ 0.16
CNTN2-227ENST00000639843 SMARCA2P51531 1590 aa16.02■□□□□ 0.15
CNTN2-227ENST00000639843 SOGA1O94964 1423 aa16■□□□□ 0.15
CNTN2-227ENST00000639843 DIEXFQ68CQ4 756 aaKnown RBP15.98■□□□□ 0.15
CNTN2-227ENST00000639843 ACIN1Q9UKV3 1341 aaKnown RBP15.98■□□□□ 0.15
CNTN2-227ENST00000639843 TNIKQ9UKE5 1360 aa15.97■□□□□ 0.15
CNTN2-227ENST00000639843 UBTFP17480 764 aaKnown RBP15.95■□□□□ 0.14
CNTN2-227ENST00000639843 UNC13AQ9UPW8 1703 aa15.95■□□□□ 0.14
CNTN2-227ENST00000639843 NEUROD1Q13562 356 aa15.94■□□□□ 0.14
CNTN2-227ENST00000639843 EEA1Q15075 1411 aa15.93■□□□□ 0.14
CNTN2-227ENST00000639843 CSRNP3Q8WYN3 585 aa15.93■□□□□ 0.14
CNTN2-227ENST00000639843 CENPBP07199 599 aaPredicted RBP15.91■□□□□ 0.14
CNTN2-227ENST00000639843 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
CNTN2-227ENST00000639843 GOLGA3Q08378 1498 aa15.87■□□□□ 0.13
CNTN2-227ENST00000639843 GTF3C3Q9Y5Q9 886 aa15.83■□□□□ 0.12
CNTN2-227ENST00000639843 ZNF316A6NFI3 1004 aaPredicted RBP15.78■□□□□ 0.12
CNTN2-227ENST00000639843 PABPN1Q86U42 306 aaKnown RBP eCLIP15.75■□□□□ 0.11
CNTN2-227ENST00000639843 CEP164Q9UPV0 1460 aa15.75■□□□□ 0.11
CNTN2-227ENST00000639843 HNRNPUL2Q1KMD3 747 aaKnown RBP15.73■□□□□ 0.11
CNTN2-227ENST00000639843 CLIP1P30622 1438 aa15.71■□□□□ 0.1
CNTN2-227ENST00000639843 SYNJ1O43426 1573 aa15.71■□□□□ 0.1
CNTN2-227ENST00000639843 KIF21BO75037 1637 aa15.7■□□□□ 0.1
CNTN2-227ENST00000639843 BICRAQ9NZM4 1560 aa15.68■□□□□ 0.1
CNTN2-227ENST00000639843 YTHDC1Q96MU7 727 aaKnown RBP15.68■□□□□ 0.1
CNTN2-227ENST00000639843 PEG3Q9GZU2 1588 aa15.67■□□□□ 0.1
CNTN2-227ENST00000639843 APLP2Q06481 763 aa15.66■□□□□ 0.1
CNTN2-227ENST00000639843 VPS8Q8N3P4 1428 aa15.65■□□□□ 0.1
CNTN2-227ENST00000639843 RANGAP1P46060 587 aaPredicted RBP15.63■□□□□ 0.09
CNTN2-227ENST00000639843 BAZ1BQ9UIG0 1483 aaKnown RBP15.61■□□□□ 0.09
CNTN2-227ENST00000639843 RAPGEF2Q9Y4G8 1499 aa15.6■□□□□ 0.09
CNTN2-227ENST00000639843 MIER1Q8N108 512 aa15.59■□□□□ 0.09
CNTN2-227ENST00000639843 ATAD2BQ9ULI0 1458 aa15.57■□□□□ 0.08
CNTN2-227ENST00000639843 TOP2BQ02880 1626 aa15.47■□□□□ 0.07
CNTN2-227ENST00000639843 ERICH3Q5RHP9 1530 aa15.41■□□□□ 0.06
CNTN2-227ENST00000639843 BIVM-ERCC5R4GMW8 1640 aa15.4■□□□□ 0.06
CNTN2-227ENST00000639843 CLSPNQ9HAW4 1339 aa15.4■□□□□ 0.06
CNTN2-227ENST00000639843 DHX57Q6P158 1386 aaKnown RBP15.4■□□□□ 0.06
CNTN2-227ENST00000639843 ARAP1Q96P48 1450 aa15.39■□□□□ 0.05
CNTN2-227ENST00000639843 MYT1Q01538 1121 aa15.39■□□□□ 0.05
CNTN2-227ENST00000639843 PRXQ9BXM0 1461 aa15.38■□□□□ 0.05
CNTN2-227ENST00000639843 KANK4Q5T7N3 995 aaPredicted RBP15.36■□□□□ 0.05
CNTN2-227ENST00000639843 KIF27Q86VH2 1401 aa15.3■□□□□ 0.04
CNTN2-227ENST00000639843 RRBP1Q9P2E9 1410 aaKnown RBP15.3■□□□□ 0.04
CNTN2-227ENST00000639843 CUX1P39880 1505 aa15.29■□□□□ 0.04
CNTN2-227ENST00000639843 ITGAEP38570 1179 aa15.26■□□□□ 0.03
CNTN2-227ENST00000639843 CCNB3Q8WWL7 1395 aa15.26■□□□□ 0.03
CNTN2-227ENST00000639843 HMGXB3Q12766 1538 aa15.23■□□□□ 0.03
CNTN2-227ENST00000639843 ARHGAP35Q9NRY4 1499 aa15.22■□□□□ 0.03
CNTN2-227ENST00000639843 CUX2O14529 1486 aa15.22■□□□□ 0.03
CNTN2-227ENST00000639843 NCAPD3P42695 1498 aa15.2■□□□□ 0.02
CNTN2-227ENST00000639843 SUPT16HQ9Y5B9 1047 aaKnown RBP15.18■□□□□ 0.02
CNTN2-227ENST00000639843 CFTRP13569 1480 aa15.16■□□□□ 0.02
CNTN2-227ENST00000639843 RAB3GAP2Q9H2M9 1393 aa15.15■□□□□ 0.02
CNTN2-227ENST00000639843 TIAM1Q13009 1591 aa15.11■□□□□ 0.01
CNTN2-227ENST00000639843 MAPKBP1O60336 1514 aa15.1■□□□□ 0.01
CNTN2-227ENST00000639843 IGF1RP08069 1367 aa15.08■□□□□ 0
CNTN2-227ENST00000639843 SETD5Q9C0A6 1442 aa15.07■□□□□ 0
CNTN2-227ENST00000639843 FAM50AQ14320 339 aaKnown RBP15.06■□□□□ 0
CNTN2-227ENST00000639843 MAP3K1Q13233 1512 aa15.06■□□□□ 0
CNTN2-227ENST00000639843 LRRC9Q6ZRR7 1453 aa15.05■□□□□ -0
CNTN2-227ENST00000639843 CARMIL1Q5VZK9 1371 aa15.05■□□□□ -0
CNTN2-227ENST00000639843 KCNH8Q96L42 1107 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms