RNA–Protein interactions for RNA: ENST00000639122.1

CNTN2-220, Transcript of contactin 2, humanhuman

TSL 5

Gene CNTN2, Length 3,370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN2-220ENST00000639122 NISCHQ9Y2I1 1504 aa21.58■■□□□ 1.04
CNTN2-220ENST00000639122 SHROOM4Q9ULL8 1493 aa19.49■□□□□ 0.71
CNTN2-220ENST00000639122 SUPT5HO00267 1087 aaKnown RBP19.23■□□□□ 0.67
CNTN2-220ENST00000639122 DCAF8L2P0C7V8 631 aa18.87■□□□□ 0.61
CNTN2-220ENST00000639122 PCGF6Q9BYE7 350 aa18.48■□□□□ 0.55
CNTN2-220ENST00000639122 MYO15BQ96JP2 1530 aa18.45■□□□□ 0.54
CNTN2-220ENST00000639122 CHIC1Q5VXU3 224 aa18.44■□□□□ 0.54
CNTN2-220ENST00000639122 PPARGC1BQ86YN6 1023 aaKnown RBP18.41■□□□□ 0.54
CNTN2-220ENST00000639122 CCDC180Q9P1Z9 1646 aa18.39■□□□□ 0.53
CNTN2-220ENST00000639122 HRCP23327 699 aa18.31■□□□□ 0.52
CNTN2-220ENST00000639122 LOC105371045A0A1W2PR82 267 aa18.27■□□□□ 0.51
CNTN2-220ENST00000639122 ZCCHC6Q5VYS8 1495 aaKnown RBP18.23■□□□□ 0.51
CNTN2-220ENST00000639122 EHMT2Q96KQ7 1210 aa18.1■□□□□ 0.49
CNTN2-220ENST00000639122 FAM9AQ8IZU1 332 aaPredicted RBP17.91■□□□□ 0.46
CNTN2-220ENST00000639122 PELP1Q8IZL8 1130 aaKnown RBP17.83■□□□□ 0.45
CNTN2-220ENST00000639122 TRIM26Q12899 539 aaPredicted RBP17.66■□□□□ 0.42
CNTN2-220ENST00000639122 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
CNTN2-220ENST00000639122 DCAF1Q9Y4B6 1507 aa17.58■□□□□ 0.4
CNTN2-220ENST00000639122 SCAF1Q9H7N4 1312 aaKnown RBP17.58■□□□□ 0.4
CNTN2-220ENST00000639122 ABCC9O60706 1549 aa17.53■□□□□ 0.4
CNTN2-220ENST00000639122 TTBK1Q5TCY1 1321 aaPredicted RBP17.51■□□□□ 0.39
CNTN2-220ENST00000639122 SCRIBQ14160 1630 aa17.41■□□□□ 0.38
CNTN2-220ENST00000639122 RSF1Q96T23 1441 aaPredicted RBP17.35■□□□□ 0.37
CNTN2-220ENST00000639122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.31■□□□□ 0.36
CNTN2-220ENST00000639122 RB1CC1Q8TDY2 1594 aa17.26■□□□□ 0.35
CNTN2-220ENST00000639122 ZEB1P37275 1124 aaPredicted RBP17.19■□□□□ 0.34
CNTN2-220ENST00000639122 GTF3C3Q9Y5Q9 886 aa17.17■□□□□ 0.34
CNTN2-220ENST00000639122 CCER1Q8TC90 406 aaPredicted RBP17.16■□□□□ 0.34
CNTN2-220ENST00000639122 CECR2Q9BXF3 1484 aa17.15■□□□□ 0.34
CNTN2-220ENST00000639122 NACADO15069 1562 aa17.14■□□□□ 0.33
CNTN2-220ENST00000639122 NEUROD1Q13562 356 aa17.12■□□□□ 0.33
CNTN2-220ENST00000639122 MYT1Q01538 1121 aa17.1■□□□□ 0.33
CNTN2-220ENST00000639122 YTHDC1Q96MU7 727 aaKnown RBP17.1■□□□□ 0.33
CNTN2-220ENST00000639122 ACIN1Q9UKV3 1341 aaKnown RBP17.03■□□□□ 0.32
CNTN2-220ENST00000639122 MROH2BQ7Z745 1585 aa16.99■□□□□ 0.31
CNTN2-220ENST00000639122 CENPBP07199 599 aaPredicted RBP16.98■□□□□ 0.31
CNTN2-220ENST00000639122 RANGAP1P46060 587 aaPredicted RBP16.93■□□□□ 0.3
CNTN2-220ENST00000639122 WIZO95785 1651 aa16.91■□□□□ 0.3
CNTN2-220ENST00000639122 DIEXFQ68CQ4 756 aaKnown RBP16.88■□□□□ 0.29
CNTN2-220ENST00000639122 UBTFP17480 764 aaKnown RBP16.87■□□□□ 0.29
CNTN2-220ENST00000639122 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
CNTN2-220ENST00000639122 HNRNPUL2Q1KMD3 747 aaKnown RBP16.78■□□□□ 0.28
CNTN2-220ENST00000639122 CCDC88BA6NC98 1476 aa16.75■□□□□ 0.27
CNTN2-220ENST00000639122 SOGA1O94964 1423 aa16.74■□□□□ 0.27
CNTN2-220ENST00000639122 PABPN1Q86U42 306 aaKnown RBP eCLIP16.73■□□□□ 0.27
CNTN2-220ENST00000639122 RUSC2Q8N2Y8 1516 aa16.68■□□□□ 0.26
CNTN2-220ENST00000639122 UNC13AQ9UPW8 1703 aa16.66■□□□□ 0.26
CNTN2-220ENST00000639122 CEP162Q5TB80 1403 aa16.66■□□□□ 0.26
CNTN2-220ENST00000639122 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
CNTN2-220ENST00000639122 MIER1Q8N108 512 aa16.55■□□□□ 0.24
CNTN2-220ENST00000639122 ZNF316A6NFI3 1004 aaPredicted RBP16.55■□□□□ 0.24
CNTN2-220ENST00000639122 BICRAQ9NZM4 1560 aa16.53■□□□□ 0.24
CNTN2-220ENST00000639122 BAZ1AQ9NRL2 1556 aaPredicted RBP16.52■□□□□ 0.24
CNTN2-220ENST00000639122 TNIKQ9UKE5 1360 aa16.44■□□□□ 0.22
CNTN2-220ENST00000639122 APLP2Q06481 763 aa16.43■□□□□ 0.22
CNTN2-220ENST00000639122 EIF4G1Q04637 1599 aaKnown RBP16.43■□□□□ 0.22
CNTN2-220ENST00000639122 SMARCA4P51532 1647 aa16.43■□□□□ 0.22
CNTN2-220ENST00000639122 SMARCA2P51531 1590 aa16.4■□□□□ 0.22
CNTN2-220ENST00000639122 BCL11AQ9H165 835 aa16.39■□□□□ 0.21
CNTN2-220ENST00000639122 TOP2AP11388 1531 aaKnown RBP16.39■□□□□ 0.21
CNTN2-220ENST00000639122 WRNQ14191 1432 aaPredicted RBP eCLIP16.38■□□□□ 0.21
CNTN2-220ENST00000639122 ITGAEP38570 1179 aa16.38■□□□□ 0.21
CNTN2-220ENST00000639122 BCANQ96GW7 911 aa16.32■□□□□ 0.2
CNTN2-220ENST00000639122 GOLGA3Q08378 1498 aa16.31■□□□□ 0.2
CNTN2-220ENST00000639122 CLIP1P30622 1438 aa16.3■□□□□ 0.2
CNTN2-220ENST00000639122 RAPGEF2Q9Y4G8 1499 aa16.22■□□□□ 0.19
CNTN2-220ENST00000639122 KANK4Q5T7N3 995 aaPredicted RBP16.21■□□□□ 0.19
CNTN2-220ENST00000639122 SYNJ1O43426 1573 aa16.18■□□□□ 0.18
CNTN2-220ENST00000639122 EEA1Q15075 1411 aa16.17■□□□□ 0.18
CNTN2-220ENST00000639122 ANP32EQ9BTT0 268 aa16.16■□□□□ 0.18
CNTN2-220ENST00000639122 CEP164Q9UPV0 1460 aa16.15■□□□□ 0.18
CNTN2-220ENST00000639122 KCNH8Q96L42 1107 aa16.14■□□□□ 0.17
CNTN2-220ENST00000639122 ATAD2BQ9ULI0 1458 aa16.14■□□□□ 0.17
CNTN2-220ENST00000639122 VPS8Q8N3P4 1428 aa16.13■□□□□ 0.17
CNTN2-220ENST00000639122 PEG3Q9GZU2 1588 aa16.1■□□□□ 0.17
CNTN2-220ENST00000639122 ATP1B4Q9UN42 357 aaPredicted RBP16.1■□□□□ 0.17
CNTN2-220ENST00000639122 HIRIP3Q9BW71 556 aaPredicted RBP16.08■□□□□ 0.17
CNTN2-220ENST00000639122 BAZ1BQ9UIG0 1483 aaKnown RBP16.08■□□□□ 0.16
CNTN2-220ENST00000639122 SUPT16HQ9Y5B9 1047 aaKnown RBP16.07■□□□□ 0.16
CNTN2-220ENST00000639122 DHX57Q6P158 1386 aaKnown RBP16.03■□□□□ 0.16
CNTN2-220ENST00000639122 P3H3Q8IVL6 736 aa16.03■□□□□ 0.16
CNTN2-220ENST00000639122 TSHZ2Q9NRE2 1034 aa16.03■□□□□ 0.16
CNTN2-220ENST00000639122 KIF21BO75037 1637 aa16.03■□□□□ 0.16
CNTN2-220ENST00000639122 ERICH6Q7L0X2 663 aa15.96■□□□□ 0.15
CNTN2-220ENST00000639122 SIN3AQ96ST3 1273 aa15.96■□□□□ 0.15
CNTN2-220ENST00000639122 FAM50AQ14320 339 aaKnown RBP15.95■□□□□ 0.14
CNTN2-220ENST00000639122 DDX10Q13206 875 aaKnown RBP15.94■□□□□ 0.14
CNTN2-220ENST00000639122 ARAP1Q96P48 1450 aa15.91■□□□□ 0.14
CNTN2-220ENST00000639122 FKBP8Q14318 412 aa15.89■□□□□ 0.13
CNTN2-220ENST00000639122 NCAPD3P42695 1498 aa15.89■□□□□ 0.13
CNTN2-220ENST00000639122 TRIM52Q96A61 297 aa15.86■□□□□ 0.13
CNTN2-220ENST00000639122 CCNB3Q8WWL7 1395 aa15.83■□□□□ 0.12
CNTN2-220ENST00000639122 NEFLP07196 543 aa15.83■□□□□ 0.12
CNTN2-220ENST00000639122 HMGXB3Q12766 1538 aa15.82■□□□□ 0.12
CNTN2-220ENST00000639122 RAB3GAP2Q9H2M9 1393 aa15.81■□□□□ 0.12
CNTN2-220ENST00000639122 PRXQ9BXM0 1461 aa15.77■□□□□ 0.11
CNTN2-220ENST00000639122 PRKCSHP14314 528 aaPredicted RBP15.76■□□□□ 0.11
CNTN2-220ENST00000639122 TOP2BQ02880 1626 aa15.76■□□□□ 0.11
CNTN2-220ENST00000639122 KIF27Q86VH2 1401 aa15.74■□□□□ 0.11
CNTN2-220ENST00000639122 ARHGAP35Q9NRY4 1499 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms