RNA–Protein interactions for RNA: ENST00000639023.1

CNTN2-219, Transcript of contactin 2, humanhuman

TSL 5

Gene CNTN2, Length 3,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN2-219ENST00000639023 NISCHQ9Y2I1 1504 aa21.34■■□□□ 1.01
CNTN2-219ENST00000639023 DCAF8L2P0C7V8 631 aa18.62■□□□□ 0.57
CNTN2-219ENST00000639023 SHROOM4Q9ULL8 1493 aa18.42■□□□□ 0.54
CNTN2-219ENST00000639023 CCDC180Q9P1Z9 1646 aa18.15■□□□□ 0.5
CNTN2-219ENST00000639023 SUPT5HO00267 1087 aaKnown RBP17.98■□□□□ 0.47
CNTN2-219ENST00000639023 ZCCHC6Q5VYS8 1495 aaKnown RBP17.9■□□□□ 0.46
CNTN2-219ENST00000639023 PPARGC1BQ86YN6 1023 aaKnown RBP17.65■□□□□ 0.42
CNTN2-219ENST00000639023 ABCC9O60706 1549 aa17.64■□□□□ 0.41
CNTN2-219ENST00000639023 PCGF6Q9BYE7 350 aa17.58■□□□□ 0.41
CNTN2-219ENST00000639023 HRCP23327 699 aa17.5■□□□□ 0.39
CNTN2-219ENST00000639023 DCAF1Q9Y4B6 1507 aa17.32■□□□□ 0.36
CNTN2-219ENST00000639023 SCRIBQ14160 1630 aa17.26■□□□□ 0.35
CNTN2-219ENST00000639023 PELP1Q8IZL8 1130 aaKnown RBP17.05■□□□□ 0.32
CNTN2-219ENST00000639023 NACADO15069 1562 aa17.03■□□□□ 0.32
CNTN2-219ENST00000639023 CHIC1Q5VXU3 224 aa16.97■□□□□ 0.31
CNTN2-219ENST00000639023 MYO15BQ96JP2 1530 aa16.94■□□□□ 0.3
CNTN2-219ENST00000639023 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
CNTN2-219ENST00000639023 RB1CC1Q8TDY2 1594 aa16.92■□□□□ 0.3
CNTN2-219ENST00000639023 EHMT2Q96KQ7 1210 aa16.83■□□□□ 0.28
CNTN2-219ENST00000639023 SCAF1Q9H7N4 1312 aaKnown RBP16.82■□□□□ 0.28
CNTN2-219ENST00000639023 RSF1Q96T23 1441 aaPredicted RBP16.8■□□□□ 0.28
CNTN2-219ENST00000639023 LOC105371045A0A1W2PR82 267 aa16.79■□□□□ 0.28
CNTN2-219ENST00000639023 CECR2Q9BXF3 1484 aa16.76■□□□□ 0.27
CNTN2-219ENST00000639023 FAM9AQ8IZU1 332 aaPredicted RBP16.71■□□□□ 0.27
CNTN2-219ENST00000639023 TRIM41Q8WV44 630 aa16.7■□□□□ 0.26
CNTN2-219ENST00000639023 MROH2BQ7Z745 1585 aa16.61■□□□□ 0.25
CNTN2-219ENST00000639023 TRIM26Q12899 539 aaPredicted RBP16.49■□□□□ 0.23
CNTN2-219ENST00000639023 BAZ1AQ9NRL2 1556 aaPredicted RBP16.47■□□□□ 0.23
CNTN2-219ENST00000639023 WIZO95785 1651 aa16.47■□□□□ 0.23
CNTN2-219ENST00000639023 GTF3C3Q9Y5Q9 886 aa16.45■□□□□ 0.22
CNTN2-219ENST00000639023 YTHDC1Q96MU7 727 aaKnown RBP16.42■□□□□ 0.22
CNTN2-219ENST00000639023 NEUROD1Q13562 356 aa16.39■□□□□ 0.21
CNTN2-219ENST00000639023 TTBK1Q5TCY1 1321 aaPredicted RBP16.37■□□□□ 0.21
CNTN2-219ENST00000639023 MYT1Q01538 1121 aa16.35■□□□□ 0.21
CNTN2-219ENST00000639023 UNC13AQ9UPW8 1703 aa16.34■□□□□ 0.21
CNTN2-219ENST00000639023 ZEB1P37275 1124 aaPredicted RBP16.31■□□□□ 0.2
CNTN2-219ENST00000639023 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
CNTN2-219ENST00000639023 ACIN1Q9UKV3 1341 aaKnown RBP16.3■□□□□ 0.2
CNTN2-219ENST00000639023 CENPBP07199 599 aaPredicted RBP16.26■□□□□ 0.19
CNTN2-219ENST00000639023 BICRAQ9NZM4 1560 aa16.25■□□□□ 0.19
CNTN2-219ENST00000639023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.23■□□□□ 0.19
CNTN2-219ENST00000639023 CCER1Q8TC90 406 aaPredicted RBP16.21■□□□□ 0.19
CNTN2-219ENST00000639023 CCDC88BA6NC98 1476 aa16.2■□□□□ 0.18
CNTN2-219ENST00000639023 TOP2AP11388 1531 aaKnown RBP16.19■□□□□ 0.18
CNTN2-219ENST00000639023 BAZ1BQ9UIG0 1483 aaKnown RBP16.14■□□□□ 0.17
CNTN2-219ENST00000639023 DIEXFQ68CQ4 756 aaKnown RBP16.1■□□□□ 0.17
CNTN2-219ENST00000639023 UBTFP17480 764 aaKnown RBP16.09■□□□□ 0.17
CNTN2-219ENST00000639023 ABCC8Q09428 1581 aa16.08■□□□□ 0.16
CNTN2-219ENST00000639023 ATAD2BQ9ULI0 1458 aa16.07■□□□□ 0.16
CNTN2-219ENST00000639023 SMARCA2P51531 1590 aa16.06■□□□□ 0.16
CNTN2-219ENST00000639023 RANGAP1P46060 587 aaPredicted RBP16.05■□□□□ 0.16
CNTN2-219ENST00000639023 WRNQ14191 1432 aaPredicted RBP eCLIP15.93■□□□□ 0.14
CNTN2-219ENST00000639023 CSRNP3Q8WYN3 585 aa15.93■□□□□ 0.14
CNTN2-219ENST00000639023 EIF4G1Q04637 1599 aaKnown RBP15.91■□□□□ 0.14
CNTN2-219ENST00000639023 SOGA1O94964 1423 aa15.89■□□□□ 0.13
CNTN2-219ENST00000639023 PEG3Q9GZU2 1588 aa15.82■□□□□ 0.12
CNTN2-219ENST00000639023 NCAPD3P42695 1498 aa15.78■□□□□ 0.12
CNTN2-219ENST00000639023 RUSC2Q8N2Y8 1516 aa15.77■□□□□ 0.12
CNTN2-219ENST00000639023 APLP2Q06481 763 aa15.76■□□□□ 0.11
CNTN2-219ENST00000639023 EEA1Q15075 1411 aa15.71■□□□□ 0.1
CNTN2-219ENST00000639023 BCL11AQ9H165 835 aa15.71■□□□□ 0.1
CNTN2-219ENST00000639023 HMGXB3Q12766 1538 aa15.67■□□□□ 0.1
CNTN2-219ENST00000639023 BCANQ96GW7 911 aa15.67■□□□□ 0.1
CNTN2-219ENST00000639023 CEP162Q5TB80 1403 aa15.67■□□□□ 0.1
CNTN2-219ENST00000639023 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
CNTN2-219ENST00000639023 MIER1Q8N108 512 aa15.66■□□□□ 0.1
CNTN2-219ENST00000639023 GOLGA3Q08378 1498 aa15.64■□□□□ 0.09
CNTN2-219ENST00000639023 CC2D2AQ9P2K1 1620 aa15.63■□□□□ 0.09
CNTN2-219ENST00000639023 TNIKQ9UKE5 1360 aa15.61■□□□□ 0.09
CNTN2-219ENST00000639023 CADPSQ9ULU8 1353 aa15.6■□□□□ 0.09
CNTN2-219ENST00000639023 CEP164Q9UPV0 1460 aa15.58■□□□□ 0.08
CNTN2-219ENST00000639023 ZNF316A6NFI3 1004 aaPredicted RBP15.58■□□□□ 0.08
CNTN2-219ENST00000639023 ATP1B4Q9UN42 357 aaPredicted RBP15.56■□□□□ 0.08
CNTN2-219ENST00000639023 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
CNTN2-219ENST00000639023 CFTRP13569 1480 aa15.55■□□□□ 0.08
CNTN2-219ENST00000639023 CLIP1P30622 1438 aa15.53■□□□□ 0.08
CNTN2-219ENST00000639023 KIF27Q86VH2 1401 aa15.52■□□□□ 0.08
CNTN2-219ENST00000639023 DNAJC5BQ9UF47 199 aa15.51■□□□□ 0.07
CNTN2-219ENST00000639023 RAPGEF2Q9Y4G8 1499 aa15.5■□□□□ 0.07
CNTN2-219ENST00000639023 CUX2O14529 1486 aa15.48■□□□□ 0.07
CNTN2-219ENST00000639023 CUX1P39880 1505 aa15.47■□□□□ 0.07
CNTN2-219ENST00000639023 TOP2BQ02880 1626 aa15.47■□□□□ 0.07
CNTN2-219ENST00000639023 ANP32EQ9BTT0 268 aa15.47■□□□□ 0.07
CNTN2-219ENST00000639023 NESP48681 1621 aa15.46■□□□□ 0.07
CNTN2-219ENST00000639023 FANCD2Q9BXW9 1451 aa15.45■□□□□ 0.06
CNTN2-219ENST00000639023 P3H3Q8IVL6 736 aa15.44■□□□□ 0.06
CNTN2-219ENST00000639023 FGD5Q6ZNL6 1462 aa15.38■□□□□ 0.05
CNTN2-219ENST00000639023 SUPT16HQ9Y5B9 1047 aaKnown RBP15.37■□□□□ 0.05
CNTN2-219ENST00000639023 ITGAEP38570 1179 aa15.35■□□□□ 0.05
CNTN2-219ENST00000639023 CARMIL1Q5VZK9 1371 aa15.34■□□□□ 0.05
CNTN2-219ENST00000639023 TSHZ2Q9NRE2 1034 aa15.34■□□□□ 0.05
CNTN2-219ENST00000639023 KIF21BO75037 1637 aa15.33■□□□□ 0.05
CNTN2-219ENST00000639023 BIVM-ERCC5R4GMW8 1640 aa15.33■□□□□ 0.04
CNTN2-219ENST00000639023 ERICH6Q7L0X2 663 aa15.32■□□□□ 0.04
CNTN2-219ENST00000639023 RAD54L2Q9Y4B4 1467 aa15.32■□□□□ 0.04
CNTN2-219ENST00000639023 PDS5BQ9NTI5 1447 aa15.31■□□□□ 0.04
CNTN2-219ENST00000639023 VPS8Q8N3P4 1428 aa15.3■□□□□ 0.04
CNTN2-219ENST00000639023 TDRD9Q8NDG6 1382 aaKnown RBP15.29■□□□□ 0.04
CNTN2-219ENST00000639023 IGF1RP08069 1367 aa15.28■□□□□ 0.04
CNTN2-219ENST00000639023 PRXQ9BXM0 1461 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms