RNA–Protein interactions for RNA: ENST00000638825.1

KCNC1-207, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 3,102 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-207ENST00000638825 NISCHQ9Y2I1 1504 aa30.5■■■□□ 2.47
KCNC1-207ENST00000638825 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
KCNC1-207ENST00000638825 SUPT5HO00267 1087 aaKnown RBP26.74■■□□□ 1.87
KCNC1-207ENST00000638825 HRCP23327 699 aa26.54■■□□□ 1.84
KCNC1-207ENST00000638825 PCGF6Q9BYE7 350 aa26.19■■□□□ 1.78
KCNC1-207ENST00000638825 MYO15BQ96JP2 1530 aa26.18■■□□□ 1.78
KCNC1-207ENST00000638825 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
KCNC1-207ENST00000638825 PPARGC1BQ86YN6 1023 aaKnown RBP26.02■■□□□ 1.76
KCNC1-207ENST00000638825 ZCCHC6Q5VYS8 1495 aaKnown RBP25.9■■□□□ 1.74
KCNC1-207ENST00000638825 DCAF8L2P0C7V8 631 aa25.61■■□□□ 1.69
KCNC1-207ENST00000638825 DCAF1Q9Y4B6 1507 aa25.58■■□□□ 1.68
KCNC1-207ENST00000638825 LOC105371045A0A1W2PR82 267 aa25.54■■□□□ 1.68
KCNC1-207ENST00000638825 CCDC180Q9P1Z9 1646 aa25.4■■□□□ 1.66
KCNC1-207ENST00000638825 TRIM26Q12899 539 aaPredicted RBP25.4■■□□□ 1.66
KCNC1-207ENST00000638825 PELP1Q8IZL8 1130 aaKnown RBP25.19■■□□□ 1.62
KCNC1-207ENST00000638825 ZEB1P37275 1124 aaPredicted RBP25.11■■□□□ 1.61
KCNC1-207ENST00000638825 SCAF1Q9H7N4 1312 aaKnown RBP24.94■■□□□ 1.58
KCNC1-207ENST00000638825 TRIM41Q8WV44 630 aa24.75■■□□□ 1.55
KCNC1-207ENST00000638825 FAM9AQ8IZU1 332 aaPredicted RBP24.74■■□□□ 1.55
KCNC1-207ENST00000638825 EHMT2Q96KQ7 1210 aa24.64■■□□□ 1.54
KCNC1-207ENST00000638825 ABCC9O60706 1549 aa24.55■■□□□ 1.52
KCNC1-207ENST00000638825 RSF1Q96T23 1441 aaPredicted RBP24.49■■□□□ 1.51
KCNC1-207ENST00000638825 ACIN1Q9UKV3 1341 aaKnown RBP24.44■■□□□ 1.5
KCNC1-207ENST00000638825 NEUROD1Q13562 356 aa24.39■■□□□ 1.49
KCNC1-207ENST00000638825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.37■■□□□ 1.49
KCNC1-207ENST00000638825 CCER1Q8TC90 406 aaPredicted RBP24.35■■□□□ 1.49
KCNC1-207ENST00000638825 RB1CC1Q8TDY2 1594 aa24.33■■□□□ 1.48
KCNC1-207ENST00000638825 GTF3C3Q9Y5Q9 886 aa24.25■■□□□ 1.47
KCNC1-207ENST00000638825 SCRIBQ14160 1630 aa24.23■■□□□ 1.47
KCNC1-207ENST00000638825 CENPBP07199 599 aaPredicted RBP24.23■■□□□ 1.47
KCNC1-207ENST00000638825 DIEXFQ68CQ4 756 aaKnown RBP24.21■■□□□ 1.47
KCNC1-207ENST00000638825 MYT1Q01538 1121 aa24.12■■□□□ 1.45
KCNC1-207ENST00000638825 TTBK1Q5TCY1 1321 aaPredicted RBP24.01■■□□□ 1.43
KCNC1-207ENST00000638825 CECR2Q9BXF3 1484 aa23.88■■□□□ 1.41
KCNC1-207ENST00000638825 YTHDC1Q96MU7 727 aaKnown RBP23.84■■□□□ 1.41
KCNC1-207ENST00000638825 MROH2BQ7Z745 1585 aa23.82■■□□□ 1.4
KCNC1-207ENST00000638825 ZNF316A6NFI3 1004 aaPredicted RBP23.8■■□□□ 1.4
KCNC1-207ENST00000638825 WIZO95785 1651 aa23.71■■□□□ 1.39
KCNC1-207ENST00000638825 WRNQ14191 1432 aaPredicted RBP eCLIP23.7■■□□□ 1.38
KCNC1-207ENST00000638825 CEP162Q5TB80 1403 aa23.66■■□□□ 1.38
KCNC1-207ENST00000638825 MIER1Q8N108 512 aa23.6■■□□□ 1.37
KCNC1-207ENST00000638825 CCDC88BA6NC98 1476 aa23.55■■□□□ 1.36
KCNC1-207ENST00000638825 UBTFP17480 764 aaKnown RBP23.54■■□□□ 1.36
KCNC1-207ENST00000638825 EIF4G1Q04637 1599 aaKnown RBP23.53■■□□□ 1.36
KCNC1-207ENST00000638825 TNIKQ9UKE5 1360 aa23.52■■□□□ 1.36
KCNC1-207ENST00000638825 BAZ1AQ9NRL2 1556 aaPredicted RBP23.52■■□□□ 1.36
KCNC1-207ENST00000638825 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
KCNC1-207ENST00000638825 SOGA1O94964 1423 aa23.47■■□□□ 1.35
KCNC1-207ENST00000638825 HNRNPUL2Q1KMD3 747 aaKnown RBP23.46■■□□□ 1.35
KCNC1-207ENST00000638825 NACADO15069 1562 aa23.44■■□□□ 1.34
KCNC1-207ENST00000638825 CSRNP3Q8WYN3 585 aa23.43■■□□□ 1.34
KCNC1-207ENST00000638825 RUSC2Q8N2Y8 1516 aa23.32■■□□□ 1.32
KCNC1-207ENST00000638825 EEA1Q15075 1411 aa23.31■■□□□ 1.32
KCNC1-207ENST00000638825 TOP2AP11388 1531 aaKnown RBP23.27■■□□□ 1.32
KCNC1-207ENST00000638825 GOLGA3Q08378 1498 aa23.26■■□□□ 1.31
KCNC1-207ENST00000638825 SMARCA2P51531 1590 aa23.19■■□□□ 1.3
KCNC1-207ENST00000638825 APLP2Q06481 763 aa23.17■■□□□ 1.3
KCNC1-207ENST00000638825 SUPT16HQ9Y5B9 1047 aaKnown RBP23.13■■□□□ 1.29
KCNC1-207ENST00000638825 CLIP1P30622 1438 aa23.09■■□□□ 1.29
KCNC1-207ENST00000638825 CLSPNQ9HAW4 1339 aa23.09■■□□□ 1.29
KCNC1-207ENST00000638825 SMARCA4P51532 1647 aa23.06■■□□□ 1.28
KCNC1-207ENST00000638825 RANGAP1P46060 587 aaPredicted RBP23.06■■□□□ 1.28
KCNC1-207ENST00000638825 CEP164Q9UPV0 1460 aa23.04■■□□□ 1.28
KCNC1-207ENST00000638825 VPS8Q8N3P4 1428 aa23.02■■□□□ 1.28
KCNC1-207ENST00000638825 TSHZ2Q9NRE2 1034 aa22.95■■□□□ 1.26
KCNC1-207ENST00000638825 DHX57Q6P158 1386 aaKnown RBP22.9■■□□□ 1.26
KCNC1-207ENST00000638825 KIF21BO75037 1637 aa22.9■■□□□ 1.26
KCNC1-207ENST00000638825 ANP32EQ9BTT0 268 aa22.87■■□□□ 1.25
KCNC1-207ENST00000638825 RAPGEF2Q9Y4G8 1499 aa22.83■■□□□ 1.25
KCNC1-207ENST00000638825 SYNJ1O43426 1573 aa22.81■■□□□ 1.24
KCNC1-207ENST00000638825 BAZ1BQ9UIG0 1483 aaKnown RBP22.8■■□□□ 1.24
KCNC1-207ENST00000638825 BCANQ96GW7 911 aa22.75■■□□□ 1.23
KCNC1-207ENST00000638825 KCNH8Q96L42 1107 aa22.72■■□□□ 1.23
KCNC1-207ENST00000638825 KANK4Q5T7N3 995 aaPredicted RBP22.7■■□□□ 1.22
KCNC1-207ENST00000638825 ITGAEP38570 1179 aa22.64■■□□□ 1.21
KCNC1-207ENST00000638825 PABPN1Q86U42 306 aaKnown RBP eCLIP22.64■■□□□ 1.21
KCNC1-207ENST00000638825 FKBP8Q14318 412 aa22.63■■□□□ 1.21
KCNC1-207ENST00000638825 BCL11AQ9H165 835 aa22.61■■□□□ 1.21
KCNC1-207ENST00000638825 UNC13AQ9UPW8 1703 aa22.55■■□□□ 1.2
KCNC1-207ENST00000638825 ARAP1Q96P48 1450 aa22.55■■□□□ 1.2
KCNC1-207ENST00000638825 RRBP1Q9P2E9 1410 aaKnown RBP22.54■■□□□ 1.2
KCNC1-207ENST00000638825 CCNB3Q8WWL7 1395 aa22.51■■□□□ 1.19
KCNC1-207ENST00000638825 DDX10Q13206 875 aaKnown RBP22.51■■□□□ 1.19
KCNC1-207ENST00000638825 NEFLP07196 543 aa22.5■■□□□ 1.19
KCNC1-207ENST00000638825 CUX2O14529 1486 aa22.46■■□□□ 1.19
KCNC1-207ENST00000638825 PEG3Q9GZU2 1588 aa22.46■■□□□ 1.19
KCNC1-207ENST00000638825 RBM19Q9Y4C8 960 aaKnown RBP22.45■■□□□ 1.18
KCNC1-207ENST00000638825 RAB3GAP2Q9H2M9 1393 aa22.43■■□□□ 1.18
KCNC1-207ENST00000638825 PRXQ9BXM0 1461 aa22.43■■□□□ 1.18
KCNC1-207ENST00000638825 ERICH3Q5RHP9 1530 aa22.42■■□□□ 1.18
KCNC1-207ENST00000638825 TOP2BQ02880 1626 aa22.4■■□□□ 1.18
KCNC1-207ENST00000638825 TRIM52Q96A61 297 aa22.39■■□□□ 1.17
KCNC1-207ENST00000638825 ATAD2BQ9ULI0 1458 aa22.37■■□□□ 1.17
KCNC1-207ENST00000638825 MAPKBP1O60336 1514 aa22.35■■□□□ 1.17
KCNC1-207ENST00000638825 SIN3AQ96ST3 1273 aa22.35■■□□□ 1.17
KCNC1-207ENST00000638825 HIRIP3Q9BW71 556 aaPredicted RBP22.33■■□□□ 1.16
KCNC1-207ENST00000638825 BICRAQ9NZM4 1560 aa22.31■■□□□ 1.16
KCNC1-207ENST00000638825 PPP1R15AO75807 674 aaPredicted RBP22.31■■□□□ 1.16
KCNC1-207ENST00000638825 ANP32CO43423 234 aa22.29■■□□□ 1.16
KCNC1-207ENST00000638825 WDR97A6NE52 1622 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms