RNA–Protein interactions for RNA: ENST00000638664.1

SPIN3-210, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,793 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-210ENST00000638664 NISCHQ9Y2I1 1504 aa27.45■■□□□ 1.98
SPIN3-210ENST00000638664 SHROOM4Q9ULL8 1493 aa24■■□□□ 1.43
SPIN3-210ENST00000638664 SUPT5HO00267 1087 aaKnown RBP23.7■■□□□ 1.38
SPIN3-210ENST00000638664 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
SPIN3-210ENST00000638664 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
SPIN3-210ENST00000638664 CHIC1Q5VXU3 224 aa23.09■■□□□ 1.29
SPIN3-210ENST00000638664 DCAF8L2P0C7V8 631 aa23.02■■□□□ 1.28
SPIN3-210ENST00000638664 HRCP23327 699 aa23.01■■□□□ 1.27
SPIN3-210ENST00000638664 CCDC180Q9P1Z9 1646 aa22.99■■□□□ 1.27
SPIN3-210ENST00000638664 PCGF6Q9BYE7 350 aa22.87■■□□□ 1.25
SPIN3-210ENST00000638664 PPARGC1BQ86YN6 1023 aaKnown RBP22.65■■□□□ 1.22
SPIN3-210ENST00000638664 LOC105371045A0A1W2PR82 267 aa22.56■■□□□ 1.2
SPIN3-210ENST00000638664 DCAF1Q9Y4B6 1507 aa22.42■■□□□ 1.18
SPIN3-210ENST00000638664 TRIM26Q12899 539 aaPredicted RBP22.2■■□□□ 1.14
SPIN3-210ENST00000638664 ABCC9O60706 1549 aa22.01■■□□□ 1.11
SPIN3-210ENST00000638664 FAM9AQ8IZU1 332 aaPredicted RBP21.94■■□□□ 1.1
SPIN3-210ENST00000638664 TRIM41Q8WV44 630 aa21.94■■□□□ 1.1
SPIN3-210ENST00000638664 RSF1Q96T23 1441 aaPredicted RBP21.94■■□□□ 1.1
SPIN3-210ENST00000638664 SCRIBQ14160 1630 aa21.88■■□□□ 1.09
SPIN3-210ENST00000638664 EHMT2Q96KQ7 1210 aa21.87■■□□□ 1.09
SPIN3-210ENST00000638664 ZEB1P37275 1124 aaPredicted RBP21.79■■□□□ 1.08
SPIN3-210ENST00000638664 RB1CC1Q8TDY2 1594 aa21.78■■□□□ 1.08
SPIN3-210ENST00000638664 CECR2Q9BXF3 1484 aa21.52■■□□□ 1.04
SPIN3-210ENST00000638664 SCAF1Q9H7N4 1312 aaKnown RBP21.51■■□□□ 1.03
SPIN3-210ENST00000638664 MROH2BQ7Z745 1585 aa21.44■■□□□ 1.02
SPIN3-210ENST00000638664 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.39■■□□□ 1.01
SPIN3-210ENST00000638664 WIZO95785 1651 aa21.34■■□□□ 1.01
SPIN3-210ENST00000638664 CCER1Q8TC90 406 aaPredicted RBP21.31■■□□□ 1
SPIN3-210ENST00000638664 PELP1Q8IZL8 1130 aaKnown RBP21.29■■□□□ 1
SPIN3-210ENST00000638664 TTBK1Q5TCY1 1321 aaPredicted RBP21.24■□□□□ 0.99
SPIN3-210ENST00000638664 NACADO15069 1562 aa21.24■□□□□ 0.99
SPIN3-210ENST00000638664 BAZ1AQ9NRL2 1556 aaPredicted RBP21.12■□□□□ 0.97
SPIN3-210ENST00000638664 NEUROD1Q13562 356 aa21.12■□□□□ 0.97
SPIN3-210ENST00000638664 ACIN1Q9UKV3 1341 aaKnown RBP21.12■□□□□ 0.97
SPIN3-210ENST00000638664 EIF4G1Q04637 1599 aaKnown RBP21.1■□□□□ 0.97
SPIN3-210ENST00000638664 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
SPIN3-210ENST00000638664 DIEXFQ68CQ4 756 aaKnown RBP21.06■□□□□ 0.96
SPIN3-210ENST00000638664 CCDC88BA6NC98 1476 aa21.04■□□□□ 0.96
SPIN3-210ENST00000638664 CEP162Q5TB80 1403 aa20.98■□□□□ 0.95
SPIN3-210ENST00000638664 SOGA1O94964 1423 aa20.96■□□□□ 0.95
SPIN3-210ENST00000638664 GTF3C3Q9Y5Q9 886 aa20.95■□□□□ 0.94
SPIN3-210ENST00000638664 WRNQ14191 1432 aaPredicted RBP eCLIP20.95■□□□□ 0.94
SPIN3-210ENST00000638664 TOP2AP11388 1531 aaKnown RBP20.9■□□□□ 0.94
SPIN3-210ENST00000638664 CENPBP07199 599 aaPredicted RBP20.89■□□□□ 0.93
SPIN3-210ENST00000638664 UBTFP17480 764 aaKnown RBP20.89■□□□□ 0.93
SPIN3-210ENST00000638664 TNIKQ9UKE5 1360 aa20.86■□□□□ 0.93
SPIN3-210ENST00000638664 RUSC2Q8N2Y8 1516 aa20.85■□□□□ 0.93
SPIN3-210ENST00000638664 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
SPIN3-210ENST00000638664 CSRNP3Q8WYN3 585 aa20.84■□□□□ 0.93
SPIN3-210ENST00000638664 SMARCA4P51532 1647 aa20.81■□□□□ 0.92
SPIN3-210ENST00000638664 ZNF316A6NFI3 1004 aaPredicted RBP20.77■□□□□ 0.92
SPIN3-210ENST00000638664 YTHDC1Q96MU7 727 aaKnown RBP20.73■□□□□ 0.91
SPIN3-210ENST00000638664 HNRNPUL2Q1KMD3 747 aaKnown RBP20.7■□□□□ 0.9
SPIN3-210ENST00000638664 EEA1Q15075 1411 aa20.7■□□□□ 0.9
SPIN3-210ENST00000638664 GOLGA3Q08378 1498 aa20.67■□□□□ 0.9
SPIN3-210ENST00000638664 MIER1Q8N108 512 aa20.6■□□□□ 0.89
SPIN3-210ENST00000638664 UNC13AQ9UPW8 1703 aa20.58■□□□□ 0.89
SPIN3-210ENST00000638664 PABPN1Q86U42 306 aaKnown RBP eCLIP20.58■□□□□ 0.88
SPIN3-210ENST00000638664 RANGAP1P46060 587 aaPredicted RBP20.55■□□□□ 0.88
SPIN3-210ENST00000638664 CLIP1P30622 1438 aa20.51■□□□□ 0.87
SPIN3-210ENST00000638664 CEP164Q9UPV0 1460 aa20.5■□□□□ 0.87
SPIN3-210ENST00000638664 SYNJ1O43426 1573 aa20.47■□□□□ 0.87
SPIN3-210ENST00000638664 APLP2Q06481 763 aa20.45■□□□□ 0.86
SPIN3-210ENST00000638664 VPS8Q8N3P4 1428 aa20.42■□□□□ 0.86
SPIN3-210ENST00000638664 KIF21BO75037 1637 aa20.41■□□□□ 0.86
SPIN3-210ENST00000638664 RAPGEF2Q9Y4G8 1499 aa20.39■□□□□ 0.85
SPIN3-210ENST00000638664 BICRAQ9NZM4 1560 aa20.33■□□□□ 0.85
SPIN3-210ENST00000638664 PEG3Q9GZU2 1588 aa20.29■□□□□ 0.84
SPIN3-210ENST00000638664 BAZ1BQ9UIG0 1483 aaKnown RBP20.29■□□□□ 0.84
SPIN3-210ENST00000638664 MYT1Q01538 1121 aa20.24■□□□□ 0.83
SPIN3-210ENST00000638664 ATAD2BQ9ULI0 1458 aa20.24■□□□□ 0.83
SPIN3-210ENST00000638664 DHX57Q6P158 1386 aaKnown RBP20.2■□□□□ 0.82
SPIN3-210ENST00000638664 KANK4Q5T7N3 995 aaPredicted RBP20.19■□□□□ 0.82
SPIN3-210ENST00000638664 ARAP1Q96P48 1450 aa20.11■□□□□ 0.81
SPIN3-210ENST00000638664 CLSPNQ9HAW4 1339 aa20.11■□□□□ 0.81
SPIN3-210ENST00000638664 TOP2BQ02880 1626 aa20.11■□□□□ 0.81
SPIN3-210ENST00000638664 ITGAEP38570 1179 aa20.06■□□□□ 0.8
SPIN3-210ENST00000638664 PRXQ9BXM0 1461 aa20.05■□□□□ 0.8
SPIN3-210ENST00000638664 SUPT16HQ9Y5B9 1047 aaKnown RBP20.05■□□□□ 0.8
SPIN3-210ENST00000638664 ERICH3Q5RHP9 1530 aa20.01■□□□□ 0.79
SPIN3-210ENST00000638664 BIVM-ERCC5R4GMW8 1640 aa19.98■□□□□ 0.79
SPIN3-210ENST00000638664 RRBP1Q9P2E9 1410 aaKnown RBP19.98■□□□□ 0.79
SPIN3-210ENST00000638664 CCNB3Q8WWL7 1395 aa19.94■□□□□ 0.78
SPIN3-210ENST00000638664 KCNH8Q96L42 1107 aa19.94■□□□□ 0.78
SPIN3-210ENST00000638664 CUX1P39880 1505 aa19.91■□□□□ 0.78
SPIN3-210ENST00000638664 KIF27Q86VH2 1401 aa19.9■□□□□ 0.78
SPIN3-210ENST00000638664 ARHGAP35Q9NRY4 1499 aa19.88■□□□□ 0.77
SPIN3-210ENST00000638664 CUX2O14529 1486 aa19.86■□□□□ 0.77
SPIN3-210ENST00000638664 RAB3GAP2Q9H2M9 1393 aa19.85■□□□□ 0.77
SPIN3-210ENST00000638664 TSHZ2Q9NRE2 1034 aa19.82■□□□□ 0.76
SPIN3-210ENST00000638664 MAPKBP1O60336 1514 aa19.78■□□□□ 0.76
SPIN3-210ENST00000638664 BCANQ96GW7 911 aa19.77■□□□□ 0.76
SPIN3-210ENST00000638664 SIN3AQ96ST3 1273 aa19.77■□□□□ 0.75
SPIN3-210ENST00000638664 DDX10Q13206 875 aaKnown RBP19.76■□□□□ 0.75
SPIN3-210ENST00000638664 FAM50AQ14320 339 aaKnown RBP19.73■□□□□ 0.75
SPIN3-210ENST00000638664 NCAPD3P42695 1498 aa19.72■□□□□ 0.75
SPIN3-210ENST00000638664 SETD5Q9C0A6 1442 aa19.7■□□□□ 0.74
SPIN3-210ENST00000638664 HIRIP3Q9BW71 556 aaPredicted RBP19.7■□□□□ 0.74
SPIN3-210ENST00000638664 IGF1RP08069 1367 aa19.69■□□□□ 0.74
SPIN3-210ENST00000638664 CFTRP13569 1480 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms