RNA–Protein interactions for RNA: ENST00000637312.1

CACNB4-247, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 3,485 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-247ENST00000637312 CHIC1Q5VXU3 224 aa10.26□□□□□ -0.77
CACNB4-247ENST00000637312 NISCHQ9Y2I1 1504 aa10.18□□□□□ -0.78
CACNB4-247ENST00000637312 AEBP2Q6ZN18 517 aaPredicted RBP10.11□□□□□ -0.79
CACNB4-247ENST00000637312 PELP1Q8IZL8 1130 aaKnown RBP9.67□□□□□ -0.86
CACNB4-247ENST00000637312 MYT1Q01538 1121 aa9.54□□□□□ -0.88
CACNB4-247ENST00000637312 CCDC180Q9P1Z9 1646 aa9.49□□□□□ -0.89
CACNB4-247ENST00000637312 TTBK1Q5TCY1 1321 aaPredicted RBP9.09□□□□□ -0.95
CACNB4-247ENST00000637312 MYO15BQ96JP2 1530 aa9.05□□□□□ -0.96
CACNB4-247ENST00000637312 DCAF1Q9Y4B6 1507 aa8.98□□□□□ -0.97
CACNB4-247ENST00000637312 PRKCSHP14314 528 aaPredicted RBP8.94□□□□□ -0.98
CACNB4-247ENST00000637312 PHF23Q9BUL5 403 aaPredicted RBP8.92□□□□□ -0.98
CACNB4-247ENST00000637312 ERICH6Q7L0X2 663 aa8.85□□□□□ -0.99
CACNB4-247ENST00000637312 HRCP23327 699 aa8.84□□□□□ -0.99
CACNB4-247ENST00000637312 BCL11AQ9H165 835 aa8.77□□□□□ -1.01
CACNB4-247ENST00000637312 SCAF1Q9H7N4 1312 aaKnown RBP8.74□□□□□ -1.01
CACNB4-247ENST00000637312 SHROOM4Q9ULL8 1493 aa8.72□□□□□ -1.01
CACNB4-247ENST00000637312 SLC24A1O60721 1099 aa8.72□□□□□ -1.01
CACNB4-247ENST00000637312 SENP3Q9H4L4 574 aaPredicted RBP8.7□□□□□ -1.02
CACNB4-247ENST00000637312 PPARGC1BQ86YN6 1023 aaKnown RBP8.69□□□□□ -1.02
CACNB4-247ENST00000637312 NACADO15069 1562 aa8.64□□□□□ -1.03
CACNB4-247ENST00000637312 ZCCHC6Q5VYS8 1495 aaKnown RBP8.63□□□□□ -1.03
CACNB4-247ENST00000637312 APLP2Q06481 763 aa8.61□□□□□ -1.03
CACNB4-247ENST00000637312 FAM9AQ8IZU1 332 aaPredicted RBP8.61□□□□□ -1.03
CACNB4-247ENST00000637312 CENPBP07199 599 aaPredicted RBP8.57□□□□□ -1.04
CACNB4-247ENST00000637312 PCGF6Q9BYE7 350 aa8.48□□□□□ -1.05
CACNB4-247ENST00000637312 RB1CC1Q8TDY2 1594 aa8.46□□□□□ -1.06
CACNB4-247ENST00000637312 GTF3C3Q9Y5Q9 886 aa8.41□□□□□ -1.06
CACNB4-247ENST00000637312 PLPPR3Q6T4P5 718 aa8.37□□□□□ -1.07
CACNB4-247ENST00000637312 ACIN1Q9UKV3 1341 aaKnown RBP8.37□□□□□ -1.07
CACNB4-247ENST00000637312 EIF5BO60841 1220 aaKnown RBP8.34□□□□□ -1.07
CACNB4-247ENST00000637312 NEUROD1Q13562 356 aa8.3□□□□□ -1.08
CACNB4-247ENST00000637312 DAXXQ9UER7 740 aaPredicted RBP8.3□□□□□ -1.08
CACNB4-247ENST00000637312 ANP32EQ9BTT0 268 aa8.3□□□□□ -1.08
CACNB4-247ENST00000637312 UNC13AQ9UPW8 1703 aa8.28□□□□□ -1.08
CACNB4-247ENST00000637312 CSRNP3Q8WYN3 585 aa8.23□□□□□ -1.09
CACNB4-247ENST00000637312 ZEB1P37275 1124 aaPredicted RBP8.2□□□□□ -1.1
CACNB4-247ENST00000637312 PEG3Q9GZU2 1588 aa8.19□□□□□ -1.1
CACNB4-247ENST00000637312 ANO8Q9HCE9 1232 aaPredicted RBP8.16□□□□□ -1.1
CACNB4-247ENST00000637312 PLEKHG5O94827 1062 aa8.14□□□□□ -1.11
CACNB4-247ENST00000637312 SMARCA2P51531 1590 aa8.11□□□□□ -1.11
CACNB4-247ENST00000637312 BICRAQ9NZM4 1560 aa8.11□□□□□ -1.11
CACNB4-247ENST00000637312 ABCC9O60706 1549 aa8.08□□□□□ -1.12
CACNB4-247ENST00000637312 PODXL2Q9NZ53 605 aa8.06□□□□□ -1.12
CACNB4-247ENST00000637312 UBE2Q2Q8WVN8 375 aa8.06□□□□□ -1.12
CACNB4-247ENST00000637312 CCDC136Q96JN2 1154 aa8.02□□□□□ -1.13
CACNB4-247ENST00000637312 YTHDC1Q96MU7 727 aaKnown RBP8□□□□□ -1.13
CACNB4-247ENST00000637312 PKNOX2Q96KN3 472 aa7.99□□□□□ -1.13
CACNB4-247ENST00000637312 HMGXB3Q12766 1538 aa7.98□□□□□ -1.13
CACNB4-247ENST00000637312 PRDM2Q13029 1718 aa7.97□□□□□ -1.13
CACNB4-247ENST00000637312 SALL2Q9Y467 1007 aaPredicted RBP7.96□□□□□ -1.13
CACNB4-247ENST00000637312 BAZ1AQ9NRL2 1556 aaPredicted RBP7.96□□□□□ -1.14
CACNB4-247ENST00000637312 TRIM26Q12899 539 aaPredicted RBP7.93□□□□□ -1.14
CACNB4-247ENST00000637312 DIEXFQ68CQ4 756 aaKnown RBP7.92□□□□□ -1.14
CACNB4-247ENST00000637312 FOXD1Q16676 465 aa7.9□□□□□ -1.14
CACNB4-247ENST00000637312 SMARCA4P51532 1647 aa7.9□□□□□ -1.15
CACNB4-247ENST00000637312 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.89□□□□□ -1.15
CACNB4-247ENST00000637312 TSHZ2Q9NRE2 1034 aa7.89□□□□□ -1.15
CACNB4-247ENST00000637312 SCRIBQ14160 1630 aa7.83□□□□□ -1.16
CACNB4-247ENST00000637312 WDR97A6NE52 1622 aa7.82□□□□□ -1.16
CACNB4-247ENST00000637312 NEFLP07196 543 aa7.82□□□□□ -1.16
CACNB4-247ENST00000637312 NCAPD3P42695 1498 aa7.81□□□□□ -1.16
CACNB4-247ENST00000637312 DEKP35659 375 aaKnown RBP7.81□□□□□ -1.16
CACNB4-247ENST00000637312 ERICH6BQ5W0A0 696 aa7.81□□□□□ -1.16
CACNB4-247ENST00000637312 MYT1LQ9UL68 1186 aa7.8□□□□□ -1.16
CACNB4-247ENST00000637312 TOP2AP11388 1531 aaKnown RBP7.8□□□□□ -1.16
CACNB4-247ENST00000637312 EIF4G1Q04637 1599 aaKnown RBP7.78□□□□□ -1.16
CACNB4-247ENST00000637312 RTN4Q9NQC3 1192 aaKnown RBP7.78□□□□□ -1.16
CACNB4-247ENST00000637312 RANGAP1P46060 587 aaPredicted RBP7.77□□□□□ -1.17
CACNB4-247ENST00000637312 GLIPR1L2Q4G1C9 344 aa7.75□□□□□ -1.17
CACNB4-247ENST00000637312 SUPT16HQ9Y5B9 1047 aaKnown RBP7.75□□□□□ -1.17
CACNB4-247ENST00000637312 BAZ1BQ9UIG0 1483 aaKnown RBP7.75□□□□□ -1.17
CACNB4-247ENST00000637312 A0A0U1RQG5 324 aaPredicted RBP7.75□□□□□ -1.17
CACNB4-247ENST00000637312 PDE4CQ08493 712 aa7.74□□□□□ -1.17
CACNB4-247ENST00000637312 PDIA4P13667 645 aaKnown RBP7.71□□□□□ -1.18
CACNB4-247ENST00000637312 SUPT5HO00267 1087 aaKnown RBP7.69□□□□□ -1.18
CACNB4-247ENST00000637312 RBM19Q9Y4C8 960 aaKnown RBP7.69□□□□□ -1.18
CACNB4-247ENST00000637312 CLSPNQ9HAW4 1339 aa7.69□□□□□ -1.18
CACNB4-247ENST00000637312 CCER1Q8TC90 406 aaPredicted RBP7.68□□□□□ -1.18
CACNB4-247ENST00000637312 KLHL34Q8N239 644 aa7.68□□□□□ -1.18
CACNB4-247ENST00000637312 BCANQ96GW7 911 aa7.68□□□□□ -1.18
CACNB4-247ENST00000637312 LAMC3Q9Y6N6 1575 aa7.67□□□□□ -1.18
CACNB4-247ENST00000637312 VSIG10Q8N0Z9 540 aa7.66□□□□□ -1.18
CACNB4-247ENST00000637312 ATAD2BQ9ULI0 1458 aa7.65□□□□□ -1.18
CACNB4-247ENST00000637312 IL27Q8NEV9 243 aa7.64□□□□□ -1.19
CACNB4-247ENST00000637312 PPP6R1Q9UPN7 881 aa7.64□□□□□ -1.19
CACNB4-247ENST00000637312 ZMYND15Q9H091 742 aa7.64□□□□□ -1.19
CACNB4-247ENST00000637312 NBR1Q14596 966 aa7.62□□□□□ -1.19
CACNB4-247ENST00000637312 CC2D2AQ9P2K1 1620 aa7.62□□□□□ -1.19
CACNB4-247ENST00000637312 BCL11BQ9C0K0 894 aaPredicted RBP7.61□□□□□ -1.19
CACNB4-247ENST00000637312 TIMELESSQ9UNS1 1208 aa7.61□□□□□ -1.19
CACNB4-247ENST00000637312 RSF1Q96T23 1441 aaPredicted RBP7.61□□□□□ -1.19
CACNB4-247ENST00000637312 NCBP3Q53F19 620 aaKnown RBP7.6□□□□□ -1.19
CACNB4-247ENST00000637312 RTL5Q5HYW3 569 aaPredicted RBP7.6□□□□□ -1.19
CACNB4-247ENST00000637312 LOC105371045A0A1W2PR82 267 aa7.6□□□□□ -1.19
CACNB4-247ENST00000637312 MSH5O43196 834 aa7.6□□□□□ -1.19
CACNB4-247ENST00000637312 MIER1Q8N108 512 aa7.6□□□□□ -1.19
CACNB4-247ENST00000637312 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.59□□□□□ -1.19
CACNB4-247ENST00000637312 MROH2BQ7Z745 1585 aa7.59□□□□□ -1.19
CACNB4-247ENST00000637312 FGD1P98174 961 aa7.59□□□□□ -1.19
CACNB4-247ENST00000637312 BIVM-ERCC5R4GMW8 1640 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms