RNA–Protein interactions for RNA: ENST00000637168.1

CACNA1A-237, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 2,979 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-237ENST00000637168 NISCHQ9Y2I1 1504 aa18.47■□□□□ 0.55
CACNA1A-237ENST00000637168 HRCP23327 699 aa17.04■□□□□ 0.32
CACNA1A-237ENST00000637168 PELP1Q8IZL8 1130 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-237ENST00000637168 PPARGC1BQ86YN6 1023 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-237ENST00000637168 PCGF6Q9BYE7 350 aa16.49■□□□□ 0.23
CACNA1A-237ENST00000637168 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
CACNA1A-237ENST00000637168 MYT1Q01538 1121 aa16.34■□□□□ 0.21
CACNA1A-237ENST00000637168 SUPT5HO00267 1087 aaKnown RBP16.32■□□□□ 0.2
CACNA1A-237ENST00000637168 SHROOM4Q9ULL8 1493 aa16.28■□□□□ 0.2
CACNA1A-237ENST00000637168 CHIC1Q5VXU3 224 aa16.26■□□□□ 0.19
CACNA1A-237ENST00000637168 DCAF1Q9Y4B6 1507 aa16.23■□□□□ 0.19
CACNA1A-237ENST00000637168 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
CACNA1A-237ENST00000637168 ZEB1P37275 1124 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-237ENST00000637168 CCDC180Q9P1Z9 1646 aa16.07■□□□□ 0.16
CACNA1A-237ENST00000637168 TRIM26Q12899 539 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-237ENST00000637168 AEBP2Q6ZN18 517 aaPredicted RBP15.98■□□□□ 0.15
CACNA1A-237ENST00000637168 ZCCHC6Q5VYS8 1495 aaKnown RBP15.77■□□□□ 0.12
CACNA1A-237ENST00000637168 LOC105371045A0A1W2PR82 267 aa15.77■□□□□ 0.11
CACNA1A-237ENST00000637168 ACIN1Q9UKV3 1341 aaKnown RBP15.77■□□□□ 0.11
CACNA1A-237ENST00000637168 NEUROD1Q13562 356 aa15.63■□□□□ 0.09
CACNA1A-237ENST00000637168 CENPBP07199 599 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-237ENST00000637168 GTF3C3Q9Y5Q9 886 aa15.58■□□□□ 0.09
CACNA1A-237ENST00000637168 TTBK1Q5TCY1 1321 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-237ENST00000637168 DIEXFQ68CQ4 756 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-237ENST00000637168 CCER1Q8TC90 406 aaPredicted RBP15.25■□□□□ 0.03
CACNA1A-237ENST00000637168 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-237ENST00000637168 TRIM41Q8WV44 630 aa15.17■□□□□ 0.02
CACNA1A-237ENST00000637168 DCAF8L2P0C7V8 631 aa15.12■□□□□ 0.01
CACNA1A-237ENST00000637168 ZNF316A6NFI3 1004 aaPredicted RBP15.07■□□□□ 0
CACNA1A-237ENST00000637168 FAM9AQ8IZU1 332 aaPredicted RBP15.05■□□□□ 0
CACNA1A-237ENST00000637168 ABCC9O60706 1549 aa15.03■□□□□ -0
CACNA1A-237ENST00000637168 YTHDC1Q96MU7 727 aaKnown RBP15.03■□□□□ -0
CACNA1A-237ENST00000637168 BCL11AQ9H165 835 aa15.02■□□□□ -0
CACNA1A-237ENST00000637168 CLSPNQ9HAW4 1339 aa15.01□□□□□ -0.01
CACNA1A-237ENST00000637168 ANP32EQ9BTT0 268 aa14.98□□□□□ -0.01
CACNA1A-237ENST00000637168 MIER1Q8N108 512 aa14.91□□□□□ -0.02
CACNA1A-237ENST00000637168 RSF1Q96T23 1441 aaPredicted RBP14.91□□□□□ -0.02
CACNA1A-237ENST00000637168 EHMT2Q96KQ7 1210 aa14.89□□□□□ -0.03
CACNA1A-237ENST00000637168 RB1CC1Q8TDY2 1594 aa14.88□□□□□ -0.03
CACNA1A-237ENST00000637168 WRNQ14191 1432 aaPredicted RBP eCLIP14.84□□□□□ -0.03
CACNA1A-237ENST00000637168 PHF23Q9BUL5 403 aaPredicted RBP14.83□□□□□ -0.03
CACNA1A-237ENST00000637168 SUPT16HQ9Y5B9 1047 aaKnown RBP14.82□□□□□ -0.04
CACNA1A-237ENST00000637168 TSHZ2Q9NRE2 1034 aa14.8□□□□□ -0.04
CACNA1A-237ENST00000637168 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
CACNA1A-237ENST00000637168 CEP162Q5TB80 1403 aa14.63□□□□□ -0.07
CACNA1A-237ENST00000637168 TNIKQ9UKE5 1360 aa14.56□□□□□ -0.08
CACNA1A-237ENST00000637168 SCRIBQ14160 1630 aa14.52□□□□□ -0.09
CACNA1A-237ENST00000637168 PRKCSHP14314 528 aaPredicted RBP14.51□□□□□ -0.09
CACNA1A-237ENST00000637168 EIF4G1Q04637 1599 aaKnown RBP14.48□□□□□ -0.09
CACNA1A-237ENST00000637168 HNRNPUL2Q1KMD3 747 aaKnown RBP14.46□□□□□ -0.1
CACNA1A-237ENST00000637168 RBM19Q9Y4C8 960 aaKnown RBP14.45□□□□□ -0.1
CACNA1A-237ENST00000637168 EEA1Q15075 1411 aa14.42□□□□□ -0.1
CACNA1A-237ENST00000637168 ERICH6Q7L0X2 663 aa14.39□□□□□ -0.11
CACNA1A-237ENST00000637168 MROH2BQ7Z745 1585 aa14.39□□□□□ -0.11
CACNA1A-237ENST00000637168 CCDC88BA6NC98 1476 aa14.37□□□□□ -0.11
CACNA1A-237ENST00000637168 FKBP8Q14318 412 aa14.37□□□□□ -0.11
CACNA1A-237ENST00000637168 BCANQ96GW7 911 aa14.37□□□□□ -0.11
CACNA1A-237ENST00000637168 WIZO95785 1651 aa14.35□□□□□ -0.11
CACNA1A-237ENST00000637168 MYT1LQ9UL68 1186 aa14.35□□□□□ -0.11
CACNA1A-237ENST00000637168 CECR2Q9BXF3 1484 aa14.35□□□□□ -0.11
CACNA1A-237ENST00000637168 BAZ1AQ9NRL2 1556 aaPredicted RBP14.35□□□□□ -0.11
CACNA1A-237ENST00000637168 GOLGA3Q08378 1498 aa14.35□□□□□ -0.11
CACNA1A-237ENST00000637168 UBTFP17480 764 aaKnown RBP14.34□□□□□ -0.11
CACNA1A-237ENST00000637168 ABCC8Q09428 1581 aa14.34□□□□□ -0.11
CACNA1A-237ENST00000637168 NEFLP07196 543 aa14.32□□□□□ -0.12
CACNA1A-237ENST00000637168 SOGA1O94964 1423 aa14.32□□□□□ -0.12
CACNA1A-237ENST00000637168 DHX57Q6P158 1386 aaKnown RBP14.3□□□□□ -0.12
CACNA1A-237ENST00000637168 FANCIQ9NVI1 1328 aa14.29□□□□□ -0.12
CACNA1A-237ENST00000637168 MSH5O43196 834 aa14.29□□□□□ -0.12
CACNA1A-237ENST00000637168 VPS8Q8N3P4 1428 aa14.25□□□□□ -0.13
CACNA1A-237ENST00000637168 APLP2Q06481 763 aa14.23□□□□□ -0.13
CACNA1A-237ENST00000637168 KCNH8Q96L42 1107 aa14.22□□□□□ -0.13
CACNA1A-237ENST00000637168 CLIP1P30622 1438 aa14.2□□□□□ -0.14
CACNA1A-237ENST00000637168 NACADO15069 1562 aa14.2□□□□□ -0.14
CACNA1A-237ENST00000637168 RUSC2Q8N2Y8 1516 aa14.19□□□□□ -0.14
CACNA1A-237ENST00000637168 CEP164Q9UPV0 1460 aa14.18□□□□□ -0.14
CACNA1A-237ENST00000637168 KIF21BO75037 1637 aa14.17□□□□□ -0.14
CACNA1A-237ENST00000637168 ITGAEP38570 1179 aa14.16□□□□□ -0.14
CACNA1A-237ENST00000637168 TOP2AP11388 1531 aaKnown RBP14.15□□□□□ -0.14
CACNA1A-237ENST00000637168 DEKP35659 375 aaKnown RBP14.14□□□□□ -0.15
CACNA1A-237ENST00000637168 CDK11AQ9UQ88 783 aaPredicted RBP14.13□□□□□ -0.15
CACNA1A-237ENST00000637168 BAZ1BQ9UIG0 1483 aaKnown RBP14.11□□□□□ -0.15
CACNA1A-237ENST00000637168 CCER2I3L3R5 266 aa14.1□□□□□ -0.15
CACNA1A-237ENST00000637168 CUX2O14529 1486 aa14.1□□□□□ -0.15
CACNA1A-237ENST00000637168 SMARCA2P51531 1590 aa14.09□□□□□ -0.15
CACNA1A-237ENST00000637168 ERICH6BQ5W0A0 696 aa14.08□□□□□ -0.16
CACNA1A-237ENST00000637168 DDX10Q13206 875 aaKnown RBP14.04□□□□□ -0.16
CACNA1A-237ENST00000637168 RRBP1Q9P2E9 1410 aaKnown RBP14.03□□□□□ -0.16
CACNA1A-237ENST00000637168 TRIM52Q96A61 297 aa14.02□□□□□ -0.16
CACNA1A-237ENST00000637168 PPP1R15AO75807 674 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-237ENST00000637168 ANO8Q9HCE9 1232 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-237ENST00000637168 ANP32CO43423 234 aa13.99□□□□□ -0.17
CACNA1A-237ENST00000637168 MAPKBP1O60336 1514 aa13.95□□□□□ -0.18
CACNA1A-237ENST00000637168 RAPGEF2Q9Y4G8 1499 aa13.94□□□□□ -0.18
CACNA1A-237ENST00000637168 NOP58Q9Y2X3 529 aaKnown RBP13.94□□□□□ -0.18
CACNA1A-237ENST00000637168 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
CACNA1A-237ENST00000637168 PPP4R2Q9NY27 417 aa13.92□□□□□ -0.18
CACNA1A-237ENST00000637168 CCNB3Q8WWL7 1395 aa13.92□□□□□ -0.18
CACNA1A-237ENST00000637168 TIMELESSQ9UNS1 1208 aa13.92□□□□□ -0.18
CACNA1A-237ENST00000637168 SMARCA4P51532 1647 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms