RNA–Protein interactions for RNA: ENST00000636705.1

CLN5-214, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-214ENST00000636705 AEBP2Q6ZN18 517 aaPredicted RBP11.85□□□□□ -0.51
CLN5-214ENST00000636705 CHIC1Q5VXU3 224 aa11.66□□□□□ -0.54
CLN5-214ENST00000636705 PHF23Q9BUL5 403 aaPredicted RBP10.21□□□□□ -0.77
CLN5-214ENST00000636705 SENP3Q9H4L4 574 aaPredicted RBP10.13□□□□□ -0.79
CLN5-214ENST00000636705 PLPPR3Q6T4P5 718 aa9.5□□□□□ -0.89
CLN5-214ENST00000636705 FOXD1Q16676 465 aa9.34□□□□□ -0.91
CLN5-214ENST00000636705 NISCHQ9Y2I1 1504 aa9.06□□□□□ -0.96
CLN5-214ENST00000636705 PPP6R1Q9UPN7 881 aa8.97□□□□□ -0.97
CLN5-214ENST00000636705 ADRA2BP18089 450 aa8.97□□□□□ -0.97
CLN5-214ENST00000636705 PIAS4Q8N2W9 510 aaPredicted RBP8.82□□□□□ -1
CLN5-214ENST00000636705 MSH5O43196 834 aa8.68□□□□□ -1.02
CLN5-214ENST00000636705 EHMT2Q96KQ7 1210 aa8.56□□□□□ -1.04
CLN5-214ENST00000636705 SLC24A1O60721 1099 aa8.49□□□□□ -1.05
CLN5-214ENST00000636705 POTEDQ86YR6 584 aa8.44□□□□□ -1.06
CLN5-214ENST00000636705 PPP4R3CPQ6ZMV5 832 aa8.34□□□□□ -1.07
CLN5-214ENST00000636705 SCAF1Q9H7N4 1312 aaKnown RBP8.32□□□□□ -1.08
CLN5-214ENST00000636705 ABCC9O60706 1549 aa8.3□□□□□ -1.08
CLN5-214ENST00000636705 CCDC180Q9P1Z9 1646 aa8.19□□□□□ -1.1
CLN5-214ENST00000636705 NCBP3Q53F19 620 aaKnown RBP8.19□□□□□ -1.1
CLN5-214ENST00000636705 CNKSR2Q8WXI2 1034 aa8.14□□□□□ -1.11
CLN5-214ENST00000636705 KCNA4P22459 653 aa8.13□□□□□ -1.11
CLN5-214ENST00000636705 MAPK8IP2Q13387 824 aaPredicted RBP8.12□□□□□ -1.11
CLN5-214ENST00000636705 DMRT2Q9Y5R5 561 aa8.09□□□□□ -1.11
CLN5-214ENST00000636705 CSRNP3Q8WYN3 585 aa8.08□□□□□ -1.12
CLN5-214ENST00000636705 RTN4Q9NQC3 1192 aaKnown RBP8.01□□□□□ -1.13
CLN5-214ENST00000636705 NPM3O75607 178 aaKnown RBP8□□□□□ -1.13
CLN5-214ENST00000636705 RNF216Q9NWF9 866 aaPredicted RBP7.98□□□□□ -1.13
CLN5-214ENST00000636705 HOXD11P31277 338 aaPredicted RBP7.94□□□□□ -1.14
CLN5-214ENST00000636705 RB1CC1Q8TDY2 1594 aa7.93□□□□□ -1.14
CLN5-214ENST00000636705 DNAJC5BQ9UF47 199 aa7.89□□□□□ -1.15
CLN5-214ENST00000636705 NACADO15069 1562 aa7.86□□□□□ -1.15
CLN5-214ENST00000636705 AMER1Q5JTC6 1135 aaPredicted RBP7.8□□□□□ -1.16
CLN5-214ENST00000636705 SLC4A1APQ9BWU0 796 aaKnown RBP7.78□□□□□ -1.16
CLN5-214ENST00000636705 DCAF8L2P0C7V8 631 aa7.76□□□□□ -1.17
CLN5-214ENST00000636705 MYO15BQ96JP2 1530 aa7.75□□□□□ -1.17
CLN5-214ENST00000636705 PABPN1Q86U42 306 aaKnown RBP eCLIP7.72□□□□□ -1.17
CLN5-214ENST00000636705 SHROOM4Q9ULL8 1493 aa7.69□□□□□ -1.18
CLN5-214ENST00000636705 DNAJC5Q9H3Z4 198 aa7.67□□□□□ -1.18
CLN5-214ENST00000636705 DCAF8L1A6NGE4 600 aa7.66□□□□□ -1.18
CLN5-214ENST00000636705 ZBTB22O15209 634 aa7.57□□□□□ -1.2
CLN5-214ENST00000636705 CECR2Q9BXF3 1484 aa7.56□□□□□ -1.2
CLN5-214ENST00000636705 BICRAQ9NZM4 1560 aa7.55□□□□□ -1.2
CLN5-214ENST00000636705 DCAF1Q9Y4B6 1507 aa7.55□□□□□ -1.2
CLN5-214ENST00000636705 SLC4A2P04920 1241 aa7.54□□□□□ -1.2
CLN5-214ENST00000636705 FOXD4L1Q9NU39 408 aa7.53□□□□□ -1.2
CLN5-214ENST00000636705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.53□□□□□ -1.2
CLN5-214ENST00000636705 PRKCSHP14314 528 aaPredicted RBP7.5□□□□□ -1.21
CLN5-214ENST00000636705 UNC13AQ9UPW8 1703 aa7.48□□□□□ -1.21
CLN5-214ENST00000636705 CC2D2AQ9P2K1 1620 aa7.48□□□□□ -1.21
CLN5-214ENST00000636705 ZCCHC6Q5VYS8 1495 aaKnown RBP7.45□□□□□ -1.22
CLN5-214ENST00000636705 EIF4G1Q04637 1599 aaKnown RBP7.45□□□□□ -1.22
CLN5-214ENST00000636705 MYCNP04198 464 aaPredicted RBP7.43□□□□□ -1.22
CLN5-214ENST00000636705 RNF39Q9H2S5 420 aa7.4□□□□□ -1.22
CLN5-214ENST00000636705 U3KPZ7 1027 aaPredicted RBP7.4□□□□□ -1.23
CLN5-214ENST00000636705 SCRIBQ14160 1630 aa7.4□□□□□ -1.23
CLN5-214ENST00000636705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.39□□□□□ -1.23
CLN5-214ENST00000636705 HNRNPUL2Q1KMD3 747 aaKnown RBP7.39□□□□□ -1.23
CLN5-214ENST00000636705 CUX2O14529 1486 aa7.36□□□□□ -1.23
CLN5-214ENST00000636705 C1QBPQ07021 282 aaKnown RBP7.36□□□□□ -1.23
CLN5-214ENST00000636705 SAMD1Q6SPF0 538 aaPredicted RBP7.35□□□□□ -1.23
CLN5-214ENST00000636705 APLP2Q06481 763 aa7.34□□□□□ -1.23
CLN5-214ENST00000636705 DAXXQ9UER7 740 aaPredicted RBP7.34□□□□□ -1.23
CLN5-214ENST00000636705 ATXN8OSP0DMR3 200 aa7.33□□□□□ -1.24
CLN5-214ENST00000636705 ERCC6Q03468 1493 aa7.29□□□□□ -1.24
CLN5-214ENST00000636705 TAOK2Q9UL54 1235 aa7.27□□□□□ -1.25
CLN5-214ENST00000636705 NCAPD3P42695 1498 aa7.26□□□□□ -1.25
CLN5-214ENST00000636705 PLCB2Q00722 1185 aa7.22□□□□□ -1.25
CLN5-214ENST00000636705 FKBP8Q14318 412 aa7.21□□□□□ -1.25
CLN5-214ENST00000636705 TIMELESSQ9UNS1 1208 aa7.21□□□□□ -1.25
CLN5-214ENST00000636705 BCANQ96GW7 911 aa7.19□□□□□ -1.26
CLN5-214ENST00000636705 SMARCA2P51531 1590 aa7.18□□□□□ -1.26
CLN5-214ENST00000636705 CACNB1Q02641 598 aaPredicted RBP7.18□□□□□ -1.26
CLN5-214ENST00000636705 ZNF219Q9P2Y4 722 aaPredicted RBP7.17□□□□□ -1.26
CLN5-214ENST00000636705 ATAD2BQ9ULI0 1458 aa7.16□□□□□ -1.26
CLN5-214ENST00000636705 HMGXB3Q12766 1538 aa7.16□□□□□ -1.26
CLN5-214ENST00000636705 TPRNQ4KMQ1 711 aa7.16□□□□□ -1.26
CLN5-214ENST00000636705 SPINK5Q9NQ38 1064 aaPredicted RBP7.15□□□□□ -1.26
CLN5-214ENST00000636705 CAPN15O75808 1086 aa7.15□□□□□ -1.27
CLN5-214ENST00000636705 ATF5Q9Y2D1 282 aaPredicted RBP7.15□□□□□ -1.27
CLN5-214ENST00000636705 PDS5BQ9NTI5 1447 aa7.14□□□□□ -1.27
CLN5-214ENST00000636705 HAP1P54257 671 aaPredicted RBP7.13□□□□□ -1.27
CLN5-214ENST00000636705 TULP1O00294 542 aaPredicted RBP7.11□□□□□ -1.27
CLN5-214ENST00000636705 TRHP20396 242 aaPredicted RBP7.1□□□□□ -1.27
CLN5-214ENST00000636705 BAZ1BQ9UIG0 1483 aaKnown RBP7.1□□□□□ -1.27
CLN5-214ENST00000636705 LAMC3Q9Y6N6 1575 aa7.09□□□□□ -1.27
CLN5-214ENST00000636705 ARXQ96QS3 562 aa7.09□□□□□ -1.27
CLN5-214ENST00000636705 BAZ1AQ9NRL2 1556 aaPredicted RBP7.08□□□□□ -1.28
CLN5-214ENST00000636705 TRIM41Q8WV44 630 aa7.07□□□□□ -1.28
CLN5-214ENST00000636705 SMARCA4P51532 1647 aa7.05□□□□□ -1.28
CLN5-214ENST00000636705 OSCARQ8IYS5 282 aa7.05□□□□□ -1.28
CLN5-214ENST00000636705 DSG3P32926 999 aa7.04□□□□□ -1.28
CLN5-214ENST00000636705 CADPSQ9ULU8 1353 aa7.04□□□□□ -1.28
CLN5-214ENST00000636705 PEG3Q9GZU2 1588 aa7.04□□□□□ -1.28
CLN5-214ENST00000636705 NESP48681 1621 aa7.03□□□□□ -1.28
CLN5-214ENST00000636705 POLA2Q14181 598 aa7.01□□□□□ -1.29
CLN5-214ENST00000636705 MRC2Q9UBG0 1479 aa7.01□□□□□ -1.29
CLN5-214ENST00000636705 THOC2Q8NI27 1593 aaKnown RBP7.01□□□□□ -1.29
CLN5-214ENST00000636705 ZBTB12Q9Y330 459 aaPredicted RBP6.99□□□□□ -1.29
CLN5-214ENST00000636705 ABCB7O75027 752 aa6.98□□□□□ -1.29
CLN5-214ENST00000636705 KDM2AQ9Y2K7 1162 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms