RNA–Protein interactions for RNA: ENST00000636034.1

CHRNB2-203, Transcript of cholinergic receptor nicotinic beta 2 subunit, humanhuman

TSL 5

Gene CHRNB2, Length 3,965 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2-203ENST00000636034 NISCHQ9Y2I1 1504 aa26.18■■□□□ 1.78
CHRNB2-203ENST00000636034 SHROOM4Q9ULL8 1493 aa23.92■■□□□ 1.42
CHRNB2-203ENST00000636034 SUPT5HO00267 1087 aaKnown RBP23.73■■□□□ 1.39
CHRNB2-203ENST00000636034 DCAF8L2P0C7V8 631 aa23.61■■□□□ 1.37
CHRNB2-203ENST00000636034 PCGF6Q9BYE7 350 aa22.64■■□□□ 1.21
CHRNB2-203ENST00000636034 CHIC1Q5VXU3 224 aa22.45■■□□□ 1.18
CHRNB2-203ENST00000636034 EHMT2Q96KQ7 1210 aa22.42■■□□□ 1.18
CHRNB2-203ENST00000636034 LOC105371045A0A1W2PR82 267 aa22.27■■□□□ 1.16
CHRNB2-203ENST00000636034 PPARGC1BQ86YN6 1023 aaKnown RBP22.24■■□□□ 1.15
CHRNB2-203ENST00000636034 HRCP23327 699 aa22.23■■□□□ 1.15
CHRNB2-203ENST00000636034 FAM9AQ8IZU1 332 aaPredicted RBP22.15■■□□□ 1.14
CHRNB2-203ENST00000636034 MYO15BQ96JP2 1530 aa22.11■■□□□ 1.13
CHRNB2-203ENST00000636034 ZCCHC6Q5VYS8 1495 aaKnown RBP22.03■■□□□ 1.12
CHRNB2-203ENST00000636034 TRIM41Q8WV44 630 aa21.78■■□□□ 1.08
CHRNB2-203ENST00000636034 TTBK1Q5TCY1 1321 aaPredicted RBP21.67■■□□□ 1.06
CHRNB2-203ENST00000636034 TRIM26Q12899 539 aaPredicted RBP21.65■■□□□ 1.06
CHRNB2-203ENST00000636034 CCDC180Q9P1Z9 1646 aa21.54■■□□□ 1.04
CHRNB2-203ENST00000636034 DCAF1Q9Y4B6 1507 aa21.27■■□□□ 1
CHRNB2-203ENST00000636034 ZEB1P37275 1124 aaPredicted RBP21.23■□□□□ 0.99
CHRNB2-203ENST00000636034 CCER1Q8TC90 406 aaPredicted RBP21.22■□□□□ 0.99
CHRNB2-203ENST00000636034 SCRIBQ14160 1630 aa21.2■□□□□ 0.98
CHRNB2-203ENST00000636034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.19■□□□□ 0.98
CHRNB2-203ENST00000636034 ABCC9O60706 1549 aa21.11■□□□□ 0.97
CHRNB2-203ENST00000636034 RANGAP1P46060 587 aaPredicted RBP21.06■□□□□ 0.96
CHRNB2-203ENST00000636034 RSF1Q96T23 1441 aaPredicted RBP21.05■□□□□ 0.96
CHRNB2-203ENST00000636034 UBTFP17480 764 aaKnown RBP20.97■□□□□ 0.95
CHRNB2-203ENST00000636034 YTHDC1Q96MU7 727 aaKnown RBP20.84■□□□□ 0.93
CHRNB2-203ENST00000636034 RB1CC1Q8TDY2 1594 aa20.83■□□□□ 0.92
CHRNB2-203ENST00000636034 SCAF1Q9H7N4 1312 aaKnown RBP20.8■□□□□ 0.92
CHRNB2-203ENST00000636034 CECR2Q9BXF3 1484 aa20.79■□□□□ 0.92
CHRNB2-203ENST00000636034 HNRNPUL2Q1KMD3 747 aaKnown RBP20.72■□□□□ 0.91
CHRNB2-203ENST00000636034 DIEXFQ68CQ4 756 aaKnown RBP20.7■□□□□ 0.9
CHRNB2-203ENST00000636034 PABPN1Q86U42 306 aaKnown RBP eCLIP20.69■□□□□ 0.9
CHRNB2-203ENST00000636034 CENPBP07199 599 aaPredicted RBP20.64■□□□□ 0.89
CHRNB2-203ENST00000636034 APLP2Q06481 763 aa20.64■□□□□ 0.89
CHRNB2-203ENST00000636034 PELP1Q8IZL8 1130 aaKnown RBP20.61■□□□□ 0.89
CHRNB2-203ENST00000636034 MROH2BQ7Z745 1585 aa20.56■□□□□ 0.88
CHRNB2-203ENST00000636034 NEUROD1Q13562 356 aa20.56■□□□□ 0.88
CHRNB2-203ENST00000636034 GTF3C3Q9Y5Q9 886 aa20.56■□□□□ 0.88
CHRNB2-203ENST00000636034 ACIN1Q9UKV3 1341 aaKnown RBP20.49■□□□□ 0.87
CHRNB2-203ENST00000636034 CSRNP3Q8WYN3 585 aa20.44■□□□□ 0.86
CHRNB2-203ENST00000636034 WIZO95785 1651 aa20.42■□□□□ 0.86
CHRNB2-203ENST00000636034 ABCC8Q09428 1581 aa20.35■□□□□ 0.85
CHRNB2-203ENST00000636034 ITGAEP38570 1179 aa20.35■□□□□ 0.85
CHRNB2-203ENST00000636034 SOGA1O94964 1423 aa20.32■□□□□ 0.84
CHRNB2-203ENST00000636034 CEP162Q5TB80 1403 aa20.3■□□□□ 0.84
CHRNB2-203ENST00000636034 ZNF316A6NFI3 1004 aaPredicted RBP20.3■□□□□ 0.84
CHRNB2-203ENST00000636034 CCDC88BA6NC98 1476 aa20.3■□□□□ 0.84
CHRNB2-203ENST00000636034 NACADO15069 1562 aa20.24■□□□□ 0.83
CHRNB2-203ENST00000636034 ATP1B4Q9UN42 357 aaPredicted RBP20.19■□□□□ 0.82
CHRNB2-203ENST00000636034 MIER1Q8N108 512 aa20.17■□□□□ 0.82
CHRNB2-203ENST00000636034 RUSC2Q8N2Y8 1516 aa20.15■□□□□ 0.82
CHRNB2-203ENST00000636034 BAZ1AQ9NRL2 1556 aaPredicted RBP20.1■□□□□ 0.81
CHRNB2-203ENST00000636034 TNIKQ9UKE5 1360 aa20.06■□□□□ 0.8
CHRNB2-203ENST00000636034 CLIP1P30622 1438 aa19.98■□□□□ 0.79
CHRNB2-203ENST00000636034 WRNQ14191 1432 aaPredicted RBP eCLIP19.97■□□□□ 0.79
CHRNB2-203ENST00000636034 GOLGA3Q08378 1498 aa19.95■□□□□ 0.78
CHRNB2-203ENST00000636034 TOP2AP11388 1531 aaKnown RBP19.88■□□□□ 0.77
CHRNB2-203ENST00000636034 P3H3Q8IVL6 736 aa19.84■□□□□ 0.77
CHRNB2-203ENST00000636034 BCANQ96GW7 911 aa19.82■□□□□ 0.76
CHRNB2-203ENST00000636034 EEA1Q15075 1411 aa19.82■□□□□ 0.76
CHRNB2-203ENST00000636034 SMARCA2P51531 1590 aa19.81■□□□□ 0.76
CHRNB2-203ENST00000636034 SMARCA4P51532 1647 aa19.81■□□□□ 0.76
CHRNB2-203ENST00000636034 FAM50AQ14320 339 aaKnown RBP19.81■□□□□ 0.76
CHRNB2-203ENST00000636034 CEP164Q9UPV0 1460 aa19.76■□□□□ 0.75
CHRNB2-203ENST00000636034 KANK4Q5T7N3 995 aaPredicted RBP19.76■□□□□ 0.75
CHRNB2-203ENST00000636034 HIRIP3Q9BW71 556 aaPredicted RBP19.72■□□□□ 0.75
CHRNB2-203ENST00000636034 RAPGEF2Q9Y4G8 1499 aa19.7■□□□□ 0.74
CHRNB2-203ENST00000636034 VPS8Q8N3P4 1428 aa19.66■□□□□ 0.74
CHRNB2-203ENST00000636034 BAZ1BQ9UIG0 1483 aaKnown RBP19.66■□□□□ 0.74
CHRNB2-203ENST00000636034 DDX10Q13206 875 aaKnown RBP19.62■□□□□ 0.73
CHRNB2-203ENST00000636034 MYT1Q01538 1121 aa19.59■□□□□ 0.73
CHRNB2-203ENST00000636034 CNGB1Q14028 1251 aaPredicted RBP19.55■□□□□ 0.72
CHRNB2-203ENST00000636034 EIF4G1Q04637 1599 aaKnown RBP19.54■□□□□ 0.72
CHRNB2-203ENST00000636034 KCNH8Q96L42 1107 aa19.54■□□□□ 0.72
CHRNB2-203ENST00000636034 SIN3AQ96ST3 1273 aa19.53■□□□□ 0.72
CHRNB2-203ENST00000636034 SYNJ1O43426 1573 aa19.53■□□□□ 0.72
CHRNB2-203ENST00000636034 NEFLP07196 543 aa19.51■□□□□ 0.71
CHRNB2-203ENST00000636034 TRIM52Q96A61 297 aa19.49■□□□□ 0.71
CHRNB2-203ENST00000636034 SUPT16HQ9Y5B9 1047 aaKnown RBP19.47■□□□□ 0.71
CHRNB2-203ENST00000636034 ATAD2BQ9ULI0 1458 aa19.47■□□□□ 0.71
CHRNB2-203ENST00000636034 FKBP8Q14318 412 aa19.46■□□□□ 0.71
CHRNB2-203ENST00000636034 DHX57Q6P158 1386 aaKnown RBP19.45■□□□□ 0.7
CHRNB2-203ENST00000636034 ARID3CA6NKF2 412 aa19.45■□□□□ 0.7
CHRNB2-203ENST00000636034 KIF21BO75037 1637 aa19.39■□□□□ 0.7
CHRNB2-203ENST00000636034 CCNB3Q8WWL7 1395 aa19.39■□□□□ 0.69
CHRNB2-203ENST00000636034 KIF27Q86VH2 1401 aa19.37■□□□□ 0.69
CHRNB2-203ENST00000636034 ANP32CO43423 234 aa19.34■□□□□ 0.69
CHRNB2-203ENST00000636034 POLR3GLQ9BT43 218 aa19.32■□□□□ 0.68
CHRNB2-203ENST00000636034 UNC13AQ9UPW8 1703 aa19.31■□□□□ 0.68
CHRNB2-203ENST00000636034 RAB3GAP2Q9H2M9 1393 aa19.31■□□□□ 0.68
CHRNB2-203ENST00000636034 IRX6P78412 446 aaPredicted RBP19.28■□□□□ 0.68
CHRNB2-203ENST00000636034 CLSPNQ9HAW4 1339 aa19.28■□□□□ 0.68
CHRNB2-203ENST00000636034 CHIC2Q9UKJ5 165 aa19.28■□□□□ 0.68
CHRNB2-203ENST00000636034 ARAP1Q96P48 1450 aa19.27■□□□□ 0.68
CHRNB2-203ENST00000636034 CUX2O14529 1486 aa19.26■□□□□ 0.67
CHRNB2-203ENST00000636034 BICRAQ9NZM4 1560 aa19.25■□□□□ 0.67
CHRNB2-203ENST00000636034 TONSLQ96HA7 1378 aa19.2■□□□□ 0.66
CHRNB2-203ENST00000636034 CARMIL1Q5VZK9 1371 aa19.18■□□□□ 0.66
CHRNB2-203ENST00000636034 HNRNPUQ00839 825 aaKnown RBP eCLIP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms