RNA–Protein interactions for RNA: ENST00000635164.1

NRXN1-239, Transcript of neurexin 1, humanhuman

TSL 5

Gene NRXN1, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-239ENST00000635164 AEBP2Q6ZN18 517 aaPredicted RBP15.59■□□□□ 0.09
NRXN1-239ENST00000635164 CHIC1Q5VXU3 224 aa15.09■□□□□ 0.01
NRXN1-239ENST00000635164 NISCHQ9Y2I1 1504 aa13.95□□□□□ -0.18
NRXN1-239ENST00000635164 PHF23Q9BUL5 403 aaPredicted RBP13.27□□□□□ -0.28
NRXN1-239ENST00000635164 SENP3Q9H4L4 574 aaPredicted RBP13.22□□□□□ -0.29
NRXN1-239ENST00000635164 SHROOM4Q9ULL8 1493 aa13.05□□□□□ -0.32
NRXN1-239ENST00000635164 SUPT5HO00267 1087 aaKnown RBP12.98□□□□□ -0.33
NRXN1-239ENST00000635164 DCAF8L2P0C7V8 631 aa12.81□□□□□ -0.36
NRXN1-239ENST00000635164 PCGF6Q9BYE7 350 aa12.52□□□□□ -0.41
NRXN1-239ENST00000635164 PPARGC1BQ86YN6 1023 aaKnown RBP12.41□□□□□ -0.42
NRXN1-239ENST00000635164 EHMT2Q96KQ7 1210 aa12.38□□□□□ -0.43
NRXN1-239ENST00000635164 FOXD1Q16676 465 aa12.31□□□□□ -0.44
NRXN1-239ENST00000635164 HRCP23327 699 aa12.27□□□□□ -0.44
NRXN1-239ENST00000635164 LOC105371045A0A1W2PR82 267 aa12.26□□□□□ -0.45
NRXN1-239ENST00000635164 PLPPR3Q6T4P5 718 aa12.19□□□□□ -0.46
NRXN1-239ENST00000635164 FAM9AQ8IZU1 332 aaPredicted RBP12.14□□□□□ -0.47
NRXN1-239ENST00000635164 MYO15BQ96JP2 1530 aa12.12□□□□□ -0.47
NRXN1-239ENST00000635164 TTBK1Q5TCY1 1321 aaPredicted RBP11.96□□□□□ -0.49
NRXN1-239ENST00000635164 TRIM26Q12899 539 aaPredicted RBP11.84□□□□□ -0.51
NRXN1-239ENST00000635164 TRIM41Q8WV44 630 aa11.83□□□□□ -0.52
NRXN1-239ENST00000635164 PPP6R1Q9UPN7 881 aa11.76□□□□□ -0.53
NRXN1-239ENST00000635164 ADRA2BP18089 450 aa11.74□□□□□ -0.53
NRXN1-239ENST00000635164 ZCCHC6Q5VYS8 1495 aaKnown RBP11.73□□□□□ -0.53
NRXN1-239ENST00000635164 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.68□□□□□ -0.54
NRXN1-239ENST00000635164 CCER1Q8TC90 406 aaPredicted RBP11.65□□□□□ -0.55
NRXN1-239ENST00000635164 SCAF1Q9H7N4 1312 aaKnown RBP11.59□□□□□ -0.55
NRXN1-239ENST00000635164 PIAS4Q8N2W9 510 aaPredicted RBP11.58□□□□□ -0.56
NRXN1-239ENST00000635164 YTHDC1Q96MU7 727 aaKnown RBP11.57□□□□□ -0.56
NRXN1-239ENST00000635164 ZEB1P37275 1124 aaPredicted RBP11.57□□□□□ -0.56
NRXN1-239ENST00000635164 RANGAP1P46060 587 aaPredicted RBP11.55□□□□□ -0.56
NRXN1-239ENST00000635164 DCAF1Q9Y4B6 1507 aa11.54□□□□□ -0.56
NRXN1-239ENST00000635164 NEUROD1Q13562 356 aa11.43□□□□□ -0.58
NRXN1-239ENST00000635164 GTF3C3Q9Y5Q9 886 aa11.43□□□□□ -0.58
NRXN1-239ENST00000635164 DIEXFQ68CQ4 756 aaKnown RBP11.4□□□□□ -0.58
NRXN1-239ENST00000635164 UBTFP17480 764 aaKnown RBP11.39□□□□□ -0.59
NRXN1-239ENST00000635164 MSH5O43196 834 aa11.37□□□□□ -0.59
NRXN1-239ENST00000635164 HNRNPUL2Q1KMD3 747 aaKnown RBP11.36□□□□□ -0.59
NRXN1-239ENST00000635164 PELP1Q8IZL8 1130 aaKnown RBP11.36□□□□□ -0.59
NRXN1-239ENST00000635164 ACIN1Q9UKV3 1341 aaKnown RBP11.34□□□□□ -0.59
NRXN1-239ENST00000635164 CENPBP07199 599 aaPredicted RBP11.34□□□□□ -0.59
NRXN1-239ENST00000635164 SCRIBQ14160 1630 aa11.32□□□□□ -0.6
NRXN1-239ENST00000635164 RSF1Q96T23 1441 aaPredicted RBP11.31□□□□□ -0.6
NRXN1-239ENST00000635164 CCDC180Q9P1Z9 1646 aa11.27□□□□□ -0.6
NRXN1-239ENST00000635164 ABCC9O60706 1549 aa11.24□□□□□ -0.61
NRXN1-239ENST00000635164 RB1CC1Q8TDY2 1594 aa11.2□□□□□ -0.62
NRXN1-239ENST00000635164 CECR2Q9BXF3 1484 aa11.17□□□□□ -0.62
NRXN1-239ENST00000635164 APLP2Q06481 763 aa11.17□□□□□ -0.62
NRXN1-239ENST00000635164 ITGAEP38570 1179 aa11.14□□□□□ -0.63
NRXN1-239ENST00000635164 MIER1Q8N108 512 aa11.14□□□□□ -0.63
NRXN1-239ENST00000635164 ZNF316A6NFI3 1004 aaPredicted RBP11.12□□□□□ -0.63
NRXN1-239ENST00000635164 PABPN1Q86U42 306 aaKnown RBP eCLIP11.12□□□□□ -0.63
NRXN1-239ENST00000635164 CSRNP3Q8WYN3 585 aa11.05□□□□□ -0.64
NRXN1-239ENST00000635164 BCANQ96GW7 911 aa11.02□□□□□ -0.65
NRXN1-239ENST00000635164 MROH2BQ7Z745 1585 aa11.02□□□□□ -0.65
NRXN1-239ENST00000635164 SOGA1O94964 1423 aa11.01□□□□□ -0.65
NRXN1-239ENST00000635164 CEP162Q5TB80 1403 aa10.99□□□□□ -0.65
NRXN1-239ENST00000635164 ABCC8Q09428 1581 aa10.98□□□□□ -0.65
NRXN1-239ENST00000635164 ATP1B4Q9UN42 357 aaPredicted RBP10.98□□□□□ -0.65
NRXN1-239ENST00000635164 CCDC88BA6NC98 1476 aa10.97□□□□□ -0.65
NRXN1-239ENST00000635164 WIZO95785 1651 aa10.93□□□□□ -0.66
NRXN1-239ENST00000635164 RUSC2Q8N2Y8 1516 aa10.93□□□□□ -0.66
NRXN1-239ENST00000635164 HIRIP3Q9BW71 556 aaPredicted RBP10.89□□□□□ -0.67
NRXN1-239ENST00000635164 KCNH8Q96L42 1107 aa10.84□□□□□ -0.67
NRXN1-239ENST00000635164 CNGB1Q14028 1251 aaPredicted RBP10.81□□□□□ -0.68
NRXN1-239ENST00000635164 TNIKQ9UKE5 1360 aa10.81□□□□□ -0.68
NRXN1-239ENST00000635164 P3H3Q8IVL6 736 aa10.79□□□□□ -0.68
NRXN1-239ENST00000635164 CLIP1P30622 1438 aa10.78□□□□□ -0.68
NRXN1-239ENST00000635164 DDX10Q13206 875 aaKnown RBP10.78□□□□□ -0.68
NRXN1-239ENST00000635164 SUPT16HQ9Y5B9 1047 aaKnown RBP10.78□□□□□ -0.68
NRXN1-239ENST00000635164 FAM50AQ14320 339 aaKnown RBP10.77□□□□□ -0.69
NRXN1-239ENST00000635164 KANK4Q5T7N3 995 aaPredicted RBP10.77□□□□□ -0.69
NRXN1-239ENST00000635164 TRIM52Q96A61 297 aa10.76□□□□□ -0.69
NRXN1-239ENST00000635164 MYT1Q01538 1121 aa10.76□□□□□ -0.69
NRXN1-239ENST00000635164 FKBP8Q14318 412 aa10.75□□□□□ -0.69
NRXN1-239ENST00000635164 PPP4R3CPQ6ZMV5 832 aa10.74□□□□□ -0.69
NRXN1-239ENST00000635164 GOLGA3Q08378 1498 aa10.71□□□□□ -0.69
NRXN1-239ENST00000635164 WRNQ14191 1432 aaPredicted RBP eCLIP10.71□□□□□ -0.69
NRXN1-239ENST00000635164 SIN3AQ96ST3 1273 aa10.7□□□□□ -0.7
NRXN1-239ENST00000635164 IRX6P78412 446 aaPredicted RBP10.69□□□□□ -0.7
NRXN1-239ENST00000635164 MAPK8IP2Q13387 824 aaPredicted RBP10.69□□□□□ -0.7
NRXN1-239ENST00000635164 NEFLP07196 543 aa10.69□□□□□ -0.7
NRXN1-239ENST00000635164 BAZ1AQ9NRL2 1556 aaPredicted RBP10.66□□□□□ -0.7
NRXN1-239ENST00000635164 SENP3-EIF4A1A0A087X0R7 540 aa10.66□□□□□ -0.7
NRXN1-239ENST00000635164 TSHZ2Q9NRE2 1034 aa10.64□□□□□ -0.71
NRXN1-239ENST00000635164 RAPGEF2Q9Y4G8 1499 aa10.64□□□□□ -0.71
NRXN1-239ENST00000635164 NACADO15069 1562 aa10.63□□□□□ -0.71
NRXN1-239ENST00000635164 ARID3CA6NKF2 412 aa10.61□□□□□ -0.71
NRXN1-239ENST00000635164 VPS8Q8N3P4 1428 aa10.6□□□□□ -0.71
NRXN1-239ENST00000635164 CEP164Q9UPV0 1460 aa10.59□□□□□ -0.71
NRXN1-239ENST00000635164 POTEDQ86YR6 584 aa10.59□□□□□ -0.71
NRXN1-239ENST00000635164 POLR3GLQ9BT43 218 aa10.59□□□□□ -0.71
NRXN1-239ENST00000635164 DHX57Q6P158 1386 aaKnown RBP10.59□□□□□ -0.71
NRXN1-239ENST00000635164 EEA1Q15075 1411 aa10.58□□□□□ -0.72
NRXN1-239ENST00000635164 ERICH6Q7L0X2 663 aa10.57□□□□□ -0.72
NRXN1-239ENST00000635164 TOP2AP11388 1531 aaKnown RBP10.56□□□□□ -0.72
NRXN1-239ENST00000635164 SMARCA2P51531 1590 aa10.56□□□□□ -0.72
NRXN1-239ENST00000635164 ANP32CO43423 234 aa10.56□□□□□ -0.72
NRXN1-239ENST00000635164 ANP32EQ9BTT0 268 aa10.54□□□□□ -0.72
NRXN1-239ENST00000635164 DMRT2Q9Y5R5 561 aa10.54□□□□□ -0.72
NRXN1-239ENST00000635164 HNRNPUQ00839 825 aaKnown RBP eCLIP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms