RNA–Protein interactions for RNA: ENST00000620186.4

LINC01297-203, Transcript of long intergenic non-protein coding RNA 1297, humanhuman

TSL 5

Gene LINC01297, Length 258 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01297-203ENST00000620186 AEBP2Q6ZN18 517 aaPredicted RBP23.46■■□□□ 1.35
LINC01297-203ENST00000620186 CHIC1Q5VXU3 224 aa23.31■■□□□ 1.32
LINC01297-203ENST00000620186 PHF23Q9BUL5 403 aaPredicted RBP20.54■□□□□ 0.88
LINC01297-203ENST00000620186 SENP3Q9H4L4 574 aaPredicted RBP19.86■□□□□ 0.77
LINC01297-203ENST00000620186 PLPPR3Q6T4P5 718 aa19.13■□□□□ 0.65
LINC01297-203ENST00000620186 FOXD1Q16676 465 aa18.38■□□□□ 0.53
LINC01297-203ENST00000620186 ADRA2BP18089 450 aa18.04■□□□□ 0.48
LINC01297-203ENST00000620186 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
LINC01297-203ENST00000620186 NISCHQ9Y2I1 1504 aa17.72■□□□□ 0.43
LINC01297-203ENST00000620186 PIAS4Q8N2W9 510 aaPredicted RBP17.46■□□□□ 0.39
LINC01297-203ENST00000620186 KCNA4P22459 653 aa16.99■□□□□ 0.31
LINC01297-203ENST00000620186 PPP4R3CPQ6ZMV5 832 aa16.91■□□□□ 0.3
LINC01297-203ENST00000620186 MSH5O43196 834 aa16.79■□□□□ 0.28
LINC01297-203ENST00000620186 NCBP3Q53F19 620 aaKnown RBP16.59■□□□□ 0.25
LINC01297-203ENST00000620186 SCAF1Q9H7N4 1312 aaKnown RBP16.49■□□□□ 0.23
LINC01297-203ENST00000620186 ABCC9O60706 1549 aa16.43■□□□□ 0.22
LINC01297-203ENST00000620186 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
LINC01297-203ENST00000620186 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
LINC01297-203ENST00000620186 EHMT2Q96KQ7 1210 aa16.31■□□□□ 0.2
LINC01297-203ENST00000620186 SLC4A1APQ9BWU0 796 aaKnown RBP16.27■□□□□ 0.2
LINC01297-203ENST00000620186 MAPK8IP2Q13387 824 aaPredicted RBP16.24■□□□□ 0.19
LINC01297-203ENST00000620186 CCDC180Q9P1Z9 1646 aa16.05■□□□□ 0.16
LINC01297-203ENST00000620186 RNF216Q9NWF9 866 aaPredicted RBP15.91■□□□□ 0.14
LINC01297-203ENST00000620186 DMRT2Q9Y5R5 561 aa15.9■□□□□ 0.14
LINC01297-203ENST00000620186 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
LINC01297-203ENST00000620186 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
LINC01297-203ENST00000620186 HOXD11P31277 338 aaPredicted RBP15.72■□□□□ 0.11
LINC01297-203ENST00000620186 ZBTB22O15209 634 aa15.62■□□□□ 0.09
LINC01297-203ENST00000620186 FOXD4L1Q9NU39 408 aa15.51■□□□□ 0.07
LINC01297-203ENST00000620186 RB1CC1Q8TDY2 1594 aa15.49■□□□□ 0.07
LINC01297-203ENST00000620186 SLC4A2P04920 1241 aa15.31■□□□□ 0.04
LINC01297-203ENST00000620186 NACADO15069 1562 aa15.28■□□□□ 0.04
LINC01297-203ENST00000620186 DCAF8L1A6NGE4 600 aa15.27■□□□□ 0.04
LINC01297-203ENST00000620186 PABPN1Q86U42 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
LINC01297-203ENST00000620186 DCAF8L2P0C7V8 631 aa15.23■□□□□ 0.03
LINC01297-203ENST00000620186 MYCNP04198 464 aaPredicted RBP15.09■□□□□ 0.01
LINC01297-203ENST00000620186 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.04■□□□□ -0
LINC01297-203ENST00000620186 UNC13AQ9UPW8 1703 aa15.03■□□□□ -0
LINC01297-203ENST00000620186 BICRAQ9NZM4 1560 aa14.98□□□□□ -0.01
LINC01297-203ENST00000620186 MYO15BQ96JP2 1530 aa14.95□□□□□ -0.02
LINC01297-203ENST00000620186 ATXN8OSP0DMR3 200 aa14.91□□□□□ -0.02
LINC01297-203ENST00000620186 CECR2Q9BXF3 1484 aa14.85□□□□□ -0.03
LINC01297-203ENST00000620186 U3KPZ7 1027 aaPredicted RBP14.82□□□□□ -0.04
LINC01297-203ENST00000620186 SHROOM4Q9ULL8 1493 aa14.81□□□□□ -0.04
LINC01297-203ENST00000620186 CC2D2AQ9P2K1 1620 aa14.8□□□□□ -0.04
LINC01297-203ENST00000620186 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.78□□□□□ -0.04
LINC01297-203ENST00000620186 HNRNPUL2Q1KMD3 747 aaKnown RBP14.78□□□□□ -0.04
LINC01297-203ENST00000620186 SAMD1Q6SPF0 538 aaPredicted RBP14.74□□□□□ -0.05
LINC01297-203ENST00000620186 DNAJC5Q9H3Z4 198 aa14.73□□□□□ -0.05
LINC01297-203ENST00000620186 EIF4G1Q04637 1599 aaKnown RBP14.68□□□□□ -0.06
LINC01297-203ENST00000620186 ATF5Q9Y2D1 282 aaPredicted RBP14.66□□□□□ -0.06
LINC01297-203ENST00000620186 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
LINC01297-203ENST00000620186 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
LINC01297-203ENST00000620186 ZCCHC6Q5VYS8 1495 aaKnown RBP14.6□□□□□ -0.07
LINC01297-203ENST00000620186 POTEDQ86YR6 584 aa14.57□□□□□ -0.08
LINC01297-203ENST00000620186 APLP2Q06481 763 aa14.53□□□□□ -0.08
LINC01297-203ENST00000620186 RNF39Q9H2S5 420 aa14.41□□□□□ -0.1
LINC01297-203ENST00000620186 ZNF219Q9P2Y4 722 aaPredicted RBP14.39□□□□□ -0.11
LINC01297-203ENST00000620186 FKBP8Q14318 412 aa14.37□□□□□ -0.11
LINC01297-203ENST00000620186 CUX2O14529 1486 aa14.32□□□□□ -0.12
LINC01297-203ENST00000620186 SPINK5Q9NQ38 1064 aaPredicted RBP14.29□□□□□ -0.12
LINC01297-203ENST00000620186 TRHP20396 242 aaPredicted RBP14.28□□□□□ -0.12
LINC01297-203ENST00000620186 C1QBPQ07021 282 aaKnown RBP14.27□□□□□ -0.13
LINC01297-203ENST00000620186 ERCC6Q03468 1493 aa14.26□□□□□ -0.13
LINC01297-203ENST00000620186 CAPN15O75808 1086 aa14.24□□□□□ -0.13
LINC01297-203ENST00000620186 POLA2Q14181 598 aa14.12□□□□□ -0.15
LINC01297-203ENST00000620186 NCAPD3P42695 1498 aa14.12□□□□□ -0.15
LINC01297-203ENST00000620186 FBLN2P98095 1184 aa14.05□□□□□ -0.16
LINC01297-203ENST00000620186 MKRN4PQ13434 485 aaPredicted RBP14.03□□□□□ -0.16
LINC01297-203ENST00000620186 ATAD2BQ9ULI0 1458 aa14.01□□□□□ -0.17
LINC01297-203ENST00000620186 ABCB7O75027 752 aa14□□□□□ -0.17
LINC01297-203ENST00000620186 NESP48681 1621 aa13.98□□□□□ -0.17
LINC01297-203ENST00000620186 SMARCA2P51531 1590 aa13.98□□□□□ -0.17
LINC01297-203ENST00000620186 TRIM41Q8WV44 630 aa13.98□□□□□ -0.17
LINC01297-203ENST00000620186 HMGXB3Q12766 1538 aa13.97□□□□□ -0.17
LINC01297-203ENST00000620186 SPDYE4A6NLX3 237 aa13.94□□□□□ -0.18
LINC01297-203ENST00000620186 ZBTB12Q9Y330 459 aaPredicted RBP13.9□□□□□ -0.18
LINC01297-203ENST00000620186 SMARCA4P51532 1647 aa13.9□□□□□ -0.19
LINC01297-203ENST00000620186 THOC2Q8NI27 1593 aaKnown RBP13.89□□□□□ -0.19
LINC01297-203ENST00000620186 BAZ1BQ9UIG0 1483 aaKnown RBP13.89□□□□□ -0.19
LINC01297-203ENST00000620186 DSG3P32926 999 aa13.87□□□□□ -0.19
LINC01297-203ENST00000620186 LAMC3Q9Y6N6 1575 aa13.85□□□□□ -0.19
LINC01297-203ENST00000620186 PDS5BQ9NTI5 1447 aa13.83□□□□□ -0.2
LINC01297-203ENST00000620186 BAZ1AQ9NRL2 1556 aaPredicted RBP13.8□□□□□ -0.2
LINC01297-203ENST00000620186 AMER1Q5JTC6 1135 aaPredicted RBP13.79□□□□□ -0.2
LINC01297-203ENST00000620186 CACNB1Q02641 598 aaPredicted RBP13.78□□□□□ -0.2
LINC01297-203ENST00000620186 RTN4Q9NQC3 1192 aaKnown RBP13.78□□□□□ -0.2
LINC01297-203ENST00000620186 KIF21AQ7Z4S6 1674 aa13.77□□□□□ -0.21
LINC01297-203ENST00000620186 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
LINC01297-203ENST00000620186 FBXO3Q9UK99 471 aa13.72□□□□□ -0.21
LINC01297-203ENST00000620186 PROM2Q8N271 834 aa13.71□□□□□ -0.21
LINC01297-203ENST00000620186 MRC2Q9UBG0 1479 aa13.7□□□□□ -0.22
LINC01297-203ENST00000620186 CADPSQ9ULU8 1353 aa13.7□□□□□ -0.22
LINC01297-203ENST00000620186 OSCARQ8IYS5 282 aa13.66□□□□□ -0.22
LINC01297-203ENST00000620186 WDR62O43379 1518 aa13.64□□□□□ -0.23
LINC01297-203ENST00000620186 MROH2BQ7Z745 1585 aa13.64□□□□□ -0.23
LINC01297-203ENST00000620186 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
LINC01297-203ENST00000620186 CEP164Q9UPV0 1460 aa13.59□□□□□ -0.23
LINC01297-203ENST00000620186 SPDYE2BA6NHP3 402 aa13.55□□□□□ -0.24
LINC01297-203ENST00000620186 SPDYE6P0CI01 402 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms