RNA–Protein interactions for RNA: ENST00000616380.4

EPHB6-209, Transcript of EPH receptor B6, humanhuman

TSL 2

Gene EPHB6, Length 4,409 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB6-209ENST00000616380 NISCHQ9Y2I1 1504 aa22.45■■□□□ 1.18
EPHB6-209ENST00000616380 DCAF8L2P0C7V8 631 aa22.26■■□□□ 1.15
EPHB6-209ENST00000616380 SUPT5HO00267 1087 aaKnown RBP20.78■□□□□ 0.92
EPHB6-209ENST00000616380 SHROOM4Q9ULL8 1493 aa20.65■□□□□ 0.9
EPHB6-209ENST00000616380 EHMT2Q96KQ7 1210 aa19.67■□□□□ 0.74
EPHB6-209ENST00000616380 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
EPHB6-209ENST00000616380 FAM9AQ8IZU1 332 aaPredicted RBP19.65■□□□□ 0.74
EPHB6-209ENST00000616380 APLP2Q06481 763 aa19.61■□□□□ 0.73
EPHB6-209ENST00000616380 PCGF6Q9BYE7 350 aa19.53■□□□□ 0.72
EPHB6-209ENST00000616380 ZEB1P37275 1124 aaPredicted RBP19.45■□□□□ 0.7
EPHB6-209ENST00000616380 TRIM41Q8WV44 630 aa19.42■□□□□ 0.7
EPHB6-209ENST00000616380 ABCC9O60706 1549 aa19.41■□□□□ 0.7
EPHB6-209ENST00000616380 MYT1Q01538 1121 aa19.27■□□□□ 0.68
EPHB6-209ENST00000616380 CENPBP07199 599 aaPredicted RBP19.13■□□□□ 0.65
EPHB6-209ENST00000616380 UBTFP17480 764 aaKnown RBP19.11■□□□□ 0.65
EPHB6-209ENST00000616380 CCER1Q8TC90 406 aaPredicted RBP19.09■□□□□ 0.65
EPHB6-209ENST00000616380 RANGAP1P46060 587 aaPredicted RBP19.08■□□□□ 0.65
EPHB6-209ENST00000616380 TTBK1Q5TCY1 1321 aaPredicted RBP19.03■□□□□ 0.64
EPHB6-209ENST00000616380 PABPN1Q86U42 306 aaKnown RBP eCLIP19.03■□□□□ 0.64
EPHB6-209ENST00000616380 ATP1B4Q9UN42 357 aaPredicted RBP19.01■□□□□ 0.63
EPHB6-209ENST00000616380 TRIM26Q12899 539 aaPredicted RBP18.97■□□□□ 0.63
EPHB6-209ENST00000616380 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
EPHB6-209ENST00000616380 HRCP23327 699 aa18.87■□□□□ 0.61
EPHB6-209ENST00000616380 PPARGC1BQ86YN6 1023 aaKnown RBP18.73■□□□□ 0.59
EPHB6-209ENST00000616380 CCDC180Q9P1Z9 1646 aa18.73■□□□□ 0.59
EPHB6-209ENST00000616380 LOC105371045A0A1W2PR82 267 aa18.65■□□□□ 0.58
EPHB6-209ENST00000616380 ZCCHC6Q5VYS8 1495 aaKnown RBP18.57■□□□□ 0.56
EPHB6-209ENST00000616380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.56■□□□□ 0.56
EPHB6-209ENST00000616380 HNRNPUL2Q1KMD3 747 aaKnown RBP18.56■□□□□ 0.56
EPHB6-209ENST00000616380 NEFLP07196 543 aa18.53■□□□□ 0.56
EPHB6-209ENST00000616380 ERICH6Q7L0X2 663 aa18.48■□□□□ 0.55
EPHB6-209ENST00000616380 YTHDC1Q96MU7 727 aaKnown RBP18.47■□□□□ 0.55
EPHB6-209ENST00000616380 SCRIBQ14160 1630 aa18.47■□□□□ 0.55
EPHB6-209ENST00000616380 MYT1LQ9UL68 1186 aa18.39■□□□□ 0.53
EPHB6-209ENST00000616380 RB1CC1Q8TDY2 1594 aa18.35■□□□□ 0.53
EPHB6-209ENST00000616380 ITGAEP38570 1179 aa18.23■□□□□ 0.51
EPHB6-209ENST00000616380 NACADO15069 1562 aa18.22■□□□□ 0.51
EPHB6-209ENST00000616380 FBLN2P98095 1184 aa18.2■□□□□ 0.5
EPHB6-209ENST00000616380 DIEXFQ68CQ4 756 aaKnown RBP18.15■□□□□ 0.5
EPHB6-209ENST00000616380 GTF3C3Q9Y5Q9 886 aa18.1■□□□□ 0.49
EPHB6-209ENST00000616380 CSRNP3Q8WYN3 585 aa18.07■□□□□ 0.48
EPHB6-209ENST00000616380 FAM50AQ14320 339 aaKnown RBP17.96■□□□□ 0.47
EPHB6-209ENST00000616380 DCAF1Q9Y4B6 1507 aa17.94■□□□□ 0.46
EPHB6-209ENST00000616380 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
EPHB6-209ENST00000616380 POLR3GLQ9BT43 218 aa17.86■□□□□ 0.45
EPHB6-209ENST00000616380 CDK11AQ9UQ88 783 aaPredicted RBP17.86■□□□□ 0.45
EPHB6-209ENST00000616380 ZNF316A6NFI3 1004 aaPredicted RBP17.84■□□□□ 0.45
EPHB6-209ENST00000616380 ACIN1Q9UKV3 1341 aaKnown RBP17.83■□□□□ 0.44
EPHB6-209ENST00000616380 P3H3Q8IVL6 736 aa17.82■□□□□ 0.44
EPHB6-209ENST00000616380 TRIM52Q96A61 297 aa17.81■□□□□ 0.44
EPHB6-209ENST00000616380 RSF1Q96T23 1441 aaPredicted RBP17.79■□□□□ 0.44
EPHB6-209ENST00000616380 DAXXQ9UER7 740 aaPredicted RBP17.78■□□□□ 0.44
EPHB6-209ENST00000616380 BAZ1BQ9UIG0 1483 aaKnown RBP17.77■□□□□ 0.44
EPHB6-209ENST00000616380 NPM1P06748 294 aaKnown RBP eCLIP17.74■□□□□ 0.43
EPHB6-209ENST00000616380 BAZ1AQ9NRL2 1556 aaPredicted RBP17.7■□□□□ 0.42
EPHB6-209ENST00000616380 NEUROD1Q13562 356 aa17.69■□□□□ 0.42
EPHB6-209ENST00000616380 ANP32CO43423 234 aa17.69■□□□□ 0.42
EPHB6-209ENST00000616380 ARID3CA6NKF2 412 aa17.68■□□□□ 0.42
EPHB6-209ENST00000616380 CHMP7Q8WUX9 453 aaPredicted RBP17.67■□□□□ 0.42
EPHB6-209ENST00000616380 ZNF777Q9ULD5 760 aaPredicted RBP17.59■□□□□ 0.41
EPHB6-209ENST00000616380 CNGB1Q14028 1251 aaPredicted RBP17.59■□□□□ 0.41
EPHB6-209ENST00000616380 SLC4A1APQ9BWU0 796 aaKnown RBP17.58■□□□□ 0.4
EPHB6-209ENST00000616380 CLSPNQ9HAW4 1339 aa17.58■□□□□ 0.4
EPHB6-209ENST00000616380 MYO15BQ96JP2 1530 aa17.57■□□□□ 0.4
EPHB6-209ENST00000616380 EEA1Q15075 1411 aa17.55■□□□□ 0.4
EPHB6-209ENST00000616380 BCANQ96GW7 911 aa17.54■□□□□ 0.4
EPHB6-209ENST00000616380 WRNQ14191 1432 aaPredicted RBP eCLIP17.53■□□□□ 0.4
EPHB6-209ENST00000616380 CECR2Q9BXF3 1484 aa17.52■□□□□ 0.39
EPHB6-209ENST00000616380 RTL5Q5HYW3 569 aaPredicted RBP17.51■□□□□ 0.39
EPHB6-209ENST00000616380 ERCC6Q03468 1493 aa17.5■□□□□ 0.39
EPHB6-209ENST00000616380 ESF1Q9H501 851 aaKnown RBP17.5■□□□□ 0.39
EPHB6-209ENST00000616380 ZNF326Q5BKZ1 582 aaKnown RBP17.45■□□□□ 0.38
EPHB6-209ENST00000616380 KIF27Q86VH2 1401 aa17.45■□□□□ 0.38
EPHB6-209ENST00000616380 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
EPHB6-209ENST00000616380 MTUS2Q5JR59 1369 aa17.39■□□□□ 0.37
EPHB6-209ENST00000616380 CLIP1P30622 1438 aa17.37■□□□□ 0.37
EPHB6-209ENST00000616380 TSPY4P0CV99 314 aa17.37■□□□□ 0.37
EPHB6-209ENST00000616380 TSPY10P0CW01 314 aa17.37■□□□□ 0.37
EPHB6-209ENST00000616380 TONSLQ96HA7 1378 aa17.36■□□□□ 0.37
EPHB6-209ENST00000616380 GOLGA3Q08378 1498 aa17.33■□□□□ 0.36
EPHB6-209ENST00000616380 BCL11AQ9H165 835 aa17.33■□□□□ 0.36
EPHB6-209ENST00000616380 PLEKHD1A6NEE1 506 aa17.31■□□□□ 0.36
EPHB6-209ENST00000616380 PDS5BQ9NTI5 1447 aa17.31■□□□□ 0.36
EPHB6-209ENST00000616380 MROH2BQ7Z745 1585 aa17.3■□□□□ 0.36
EPHB6-209ENST00000616380 STAG3Q9UJ98 1225 aa17.27■□□□□ 0.36
EPHB6-209ENST00000616380 CEP162Q5TB80 1403 aa17.26■□□□□ 0.35
EPHB6-209ENST00000616380 CEP164Q9UPV0 1460 aa17.25■□□□□ 0.35
EPHB6-209ENST00000616380 TNIKQ9UKE5 1360 aa17.24■□□□□ 0.35
EPHB6-209ENST00000616380 CHGAP10645 457 aaKnown RBP17.22■□□□□ 0.35
EPHB6-209ENST00000616380 EIF5BO60841 1220 aaKnown RBP17.21■□□□□ 0.35
EPHB6-209ENST00000616380 KCNH8Q96L42 1107 aa17.2■□□□□ 0.34
EPHB6-209ENST00000616380 CHIC2Q9UKJ5 165 aa17.2■□□□□ 0.34
EPHB6-209ENST00000616380 DDX10Q13206 875 aaKnown RBP17.19■□□□□ 0.34
EPHB6-209ENST00000616380 CCDC88BA6NC98 1476 aa17.19■□□□□ 0.34
EPHB6-209ENST00000616380 CUX2O14529 1486 aa17.17■□□□□ 0.34
EPHB6-209ENST00000616380 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.34
EPHB6-209ENST00000616380 CARMIL1Q5VZK9 1371 aa17.15■□□□□ 0.34
EPHB6-209ENST00000616380 ANP32EQ9BTT0 268 aa17.15■□□□□ 0.34
EPHB6-209ENST00000616380 FKBP8Q14318 412 aa17.15■□□□□ 0.34
EPHB6-209ENST00000616380 ANP32AP39687 249 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms