RNA–Protein interactions for RNA: ENST00000615024.4

RDM1-217, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 617 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-217ENST00000615024 AEBP2Q6ZN18 517 aaPredicted RBP13.85□□□□□ -0.19
RDM1-217ENST00000615024 CHIC1Q5VXU3 224 aa13.19□□□□□ -0.3
RDM1-217ENST00000615024 SENP3Q9H4L4 574 aaPredicted RBP11.71□□□□□ -0.53
RDM1-217ENST00000615024 PHF23Q9BUL5 403 aaPredicted RBP11.62□□□□□ -0.55
RDM1-217ENST00000615024 FOXD1Q16676 465 aa10.95□□□□□ -0.66
RDM1-217ENST00000615024 PLPPR3Q6T4P5 718 aa10.53□□□□□ -0.72
RDM1-217ENST00000615024 PPP6R1Q9UPN7 881 aa10.34□□□□□ -0.75
RDM1-217ENST00000615024 ADRA2BP18089 450 aa10.27□□□□□ -0.77
RDM1-217ENST00000615024 PIAS4Q8N2W9 510 aaPredicted RBP10.2□□□□□ -0.78
RDM1-217ENST00000615024 MSH5O43196 834 aa10.16□□□□□ -0.78
RDM1-217ENST00000615024 POTEDQ86YR6 584 aa9.82□□□□□ -0.84
RDM1-217ENST00000615024 NISCHQ9Y2I1 1504 aa9.72□□□□□ -0.85
RDM1-217ENST00000615024 MAPK8IP2Q13387 824 aaPredicted RBP9.43□□□□□ -0.9
RDM1-217ENST00000615024 DMRT2Q9Y5R5 561 aa9.33□□□□□ -0.92
RDM1-217ENST00000615024 SCAF1Q9H7N4 1312 aaKnown RBP9.31□□□□□ -0.92
RDM1-217ENST00000615024 PPP4R3CPQ6ZMV5 832 aa9.26□□□□□ -0.93
RDM1-217ENST00000615024 CNKSR2Q8WXI2 1034 aa9.06□□□□□ -0.96
RDM1-217ENST00000615024 HOXD11P31277 338 aaPredicted RBP9.04□□□□□ -0.96
RDM1-217ENST00000615024 RNF216Q9NWF9 866 aaPredicted RBP8.97□□□□□ -0.97
RDM1-217ENST00000615024 NCBP3Q53F19 620 aaKnown RBP8.87□□□□□ -0.99
RDM1-217ENST00000615024 EHMT2Q96KQ7 1210 aa8.87□□□□□ -0.99
RDM1-217ENST00000615024 ABCC9O60706 1549 aa8.86□□□□□ -0.99
RDM1-217ENST00000615024 CCDC180Q9P1Z9 1646 aa8.85□□□□□ -0.99
RDM1-217ENST00000615024 DCAF8L1A6NGE4 600 aa8.84□□□□□ -0.99
RDM1-217ENST00000615024 NPM3O75607 178 aaKnown RBP8.82□□□□□ -1
RDM1-217ENST00000615024 KCNA4P22459 653 aa8.82□□□□□ -1
RDM1-217ENST00000615024 RNF39Q9H2S5 420 aa8.73□□□□□ -1.01
RDM1-217ENST00000615024 DNAJC5BQ9UF47 199 aa8.72□□□□□ -1.01
RDM1-217ENST00000615024 CACNB1Q02641 598 aaPredicted RBP8.64□□□□□ -1.03
RDM1-217ENST00000615024 CSRNP3Q8WYN3 585 aa8.58□□□□□ -1.04
RDM1-217ENST00000615024 C1QBPQ07021 282 aaKnown RBP8.57□□□□□ -1.04
RDM1-217ENST00000615024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.53□□□□□ -1.04
RDM1-217ENST00000615024 RB1CC1Q8TDY2 1594 aa8.48□□□□□ -1.05
RDM1-217ENST00000615024 SLC4A2P04920 1241 aa8.44□□□□□ -1.06
RDM1-217ENST00000615024 SLC4A1APQ9BWU0 796 aaKnown RBP8.43□□□□□ -1.06
RDM1-217ENST00000615024 U3KPZ7 1027 aaPredicted RBP8.43□□□□□ -1.06
RDM1-217ENST00000615024 SLC24A1O60721 1099 aa8.41□□□□□ -1.06
RDM1-217ENST00000615024 NACADO15069 1562 aa8.37□□□□□ -1.07
RDM1-217ENST00000615024 DCAF8L2P0C7V8 631 aa8.36□□□□□ -1.07
RDM1-217ENST00000615024 SPINK5Q9NQ38 1064 aaPredicted RBP8.28□□□□□ -1.08
RDM1-217ENST00000615024 PABPN1Q86U42 306 aaKnown RBP eCLIP8.21□□□□□ -1.1
RDM1-217ENST00000615024 DSG3P32926 999 aa8.2□□□□□ -1.1
RDM1-217ENST00000615024 MYO15BQ96JP2 1530 aa8.19□□□□□ -1.1
RDM1-217ENST00000615024 UNC13AQ9UPW8 1703 aa8.18□□□□□ -1.1
RDM1-217ENST00000615024 CAPN15O75808 1086 aa8.18□□□□□ -1.1
RDM1-217ENST00000615024 RTN4Q9NQC3 1192 aaKnown RBP8.16□□□□□ -1.1
RDM1-217ENST00000615024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.14□□□□□ -1.11
RDM1-217ENST00000615024 ZBTB22O15209 634 aa8.14□□□□□ -1.11
RDM1-217ENST00000615024 HNRNPUL2Q1KMD3 747 aaKnown RBP8.14□□□□□ -1.11
RDM1-217ENST00000615024 SHROOM4Q9ULL8 1493 aa8.13□□□□□ -1.11
RDM1-217ENST00000615024 MYCNP04198 464 aaPredicted RBP8.12□□□□□ -1.11
RDM1-217ENST00000615024 AMER1Q5JTC6 1135 aaPredicted RBP8.11□□□□□ -1.11
RDM1-217ENST00000615024 SAMD1Q6SPF0 538 aaPredicted RBP8.11□□□□□ -1.11
RDM1-217ENST00000615024 APLP2Q06481 763 aa8.09□□□□□ -1.11
RDM1-217ENST00000615024 TRHP20396 242 aaPredicted RBP8.08□□□□□ -1.12
RDM1-217ENST00000615024 FOXD4L1Q9NU39 408 aa8.08□□□□□ -1.12
RDM1-217ENST00000615024 ZNF219Q9P2Y4 722 aaPredicted RBP8.07□□□□□ -1.12
RDM1-217ENST00000615024 BICRAQ9NZM4 1560 aa8.06□□□□□ -1.12
RDM1-217ENST00000615024 DCAF1Q9Y4B6 1507 aa8.04□□□□□ -1.12
RDM1-217ENST00000615024 ABCB7O75027 752 aa8.04□□□□□ -1.12
RDM1-217ENST00000615024 ZCCHC6Q5VYS8 1495 aaKnown RBP8.03□□□□□ -1.12
RDM1-217ENST00000615024 CECR2Q9BXF3 1484 aa8.02□□□□□ -1.13
RDM1-217ENST00000615024 SCRIBQ14160 1630 aa8.02□□□□□ -1.13
RDM1-217ENST00000615024 CC2D2AQ9P2K1 1620 aa8□□□□□ -1.13
RDM1-217ENST00000615024 ATF5Q9Y2D1 282 aaPredicted RBP7.99□□□□□ -1.13
RDM1-217ENST00000615024 EIF4G1Q04637 1599 aaKnown RBP7.97□□□□□ -1.13
RDM1-217ENST00000615024 POLA2Q14181 598 aa7.92□□□□□ -1.14
RDM1-217ENST00000615024 ATXN8OSP0DMR3 200 aa7.84□□□□□ -1.15
RDM1-217ENST00000615024 ERCC6Q03468 1493 aa7.78□□□□□ -1.16
RDM1-217ENST00000615024 DNAJC5Q9H3Z4 198 aa7.76□□□□□ -1.17
RDM1-217ENST00000615024 RBM42Q9BTD8 480 aaKnown RBP7.75□□□□□ -1.17
RDM1-217ENST00000615024 CUX2O14529 1486 aa7.74□□□□□ -1.17
RDM1-217ENST00000615024 ZBTB12Q9Y330 459 aaPredicted RBP7.72□□□□□ -1.17
RDM1-217ENST00000615024 SMARCA2P51531 1590 aa7.7□□□□□ -1.18
RDM1-217ENST00000615024 POTEHQ6S545 545 aa7.69□□□□□ -1.18
RDM1-217ENST00000615024 OSCARQ8IYS5 282 aa7.67□□□□□ -1.18
RDM1-217ENST00000615024 NCAPD3P42695 1498 aa7.66□□□□□ -1.18
RDM1-217ENST00000615024 HMGXB3Q12766 1538 aa7.65□□□□□ -1.18
RDM1-217ENST00000615024 BAZ1AQ9NRL2 1556 aaPredicted RBP7.63□□□□□ -1.19
RDM1-217ENST00000615024 BAZ1BQ9UIG0 1483 aaKnown RBP7.63□□□□□ -1.19
RDM1-217ENST00000615024 MKRN4PQ13434 485 aaPredicted RBP7.63□□□□□ -1.19
RDM1-217ENST00000615024 SMARCA4P51532 1647 aa7.63□□□□□ -1.19
RDM1-217ENST00000615024 FKBP8Q14318 412 aa7.62□□□□□ -1.19
RDM1-217ENST00000615024 AKT1S1Q96B36 256 aa7.62□□□□□ -1.19
RDM1-217ENST00000615024 ATAD2BQ9ULI0 1458 aa7.62□□□□□ -1.19
RDM1-217ENST00000615024 CHRDL2Q6WN34 429 aa7.58□□□□□ -1.2
RDM1-217ENST00000615024 LAMC3Q9Y6N6 1575 aa7.58□□□□□ -1.2
RDM1-217ENST00000615024 REM2Q8IYK8 340 aaPredicted RBP7.57□□□□□ -1.2
RDM1-217ENST00000615024 PDS5BQ9NTI5 1447 aa7.57□□□□□ -1.2
RDM1-217ENST00000615024 FBLN2P98095 1184 aa7.56□□□□□ -1.2
RDM1-217ENST00000615024 NESP48681 1621 aa7.53□□□□□ -1.2
RDM1-217ENST00000615024 SPDYE2BA6NHP3 402 aa7.53□□□□□ -1.2
RDM1-217ENST00000615024 SPDYE6P0CI01 402 aa7.53□□□□□ -1.2
RDM1-217ENST00000615024 SPDYE2Q495Y8 402 aa7.53□□□□□ -1.2
RDM1-217ENST00000615024 PEG3Q9GZU2 1588 aa7.52□□□□□ -1.21
RDM1-217ENST00000615024 THOC2Q8NI27 1593 aaKnown RBP7.5□□□□□ -1.21
RDM1-217ENST00000615024 KIF21AQ7Z4S6 1674 aa7.5□□□□□ -1.21
RDM1-217ENST00000615024 PITPNM1O00562 1244 aa7.49□□□□□ -1.21
RDM1-217ENST00000615024 SSUH2Q9Y2M2 353 aa7.48□□□□□ -1.21
RDM1-217ENST00000615024 TRIM41Q8WV44 630 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms