RNA–Protein interactions for RNA: ENST00000608623.1

LINC01278-202, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

Gene LINC01278, Length 5,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-202ENST00000608623 DCAF8L2P0C7V8 631 aa7.3□□□□□ -1.24
LINC01278-202ENST00000608623 AEBP2Q6ZN18 517 aaPredicted RBP7.04□□□□□ -1.28
LINC01278-202ENST00000608623 CHIC1Q5VXU3 224 aa6.78□□□□□ -1.32
LINC01278-202ENST00000608623 NISCHQ9Y2I1 1504 aa6.69□□□□□ -1.34
LINC01278-202ENST00000608623 PHF23Q9BUL5 403 aaPredicted RBP6.41□□□□□ -1.38
LINC01278-202ENST00000608623 ABCC9O60706 1549 aa6.41□□□□□ -1.38
LINC01278-202ENST00000608623 FAM9AQ8IZU1 332 aaPredicted RBP6.39□□□□□ -1.39
LINC01278-202ENST00000608623 PABPN1Q86U42 306 aaKnown RBP eCLIP6.32□□□□□ -1.4
LINC01278-202ENST00000608623 SHROOM4Q9ULL8 1493 aa6.26□□□□□ -1.41
LINC01278-202ENST00000608623 SUPT5HO00267 1087 aaKnown RBP6.19□□□□□ -1.42
LINC01278-202ENST00000608623 TTBK1Q5TCY1 1321 aaPredicted RBP6.17□□□□□ -1.42
LINC01278-202ENST00000608623 MYT1LQ9UL68 1186 aa6.15□□□□□ -1.43
LINC01278-202ENST00000608623 FBLN2P98095 1184 aa6.12□□□□□ -1.43
LINC01278-202ENST00000608623 EHMT2Q96KQ7 1210 aa6.1□□□□□ -1.43
LINC01278-202ENST00000608623 ATP1B4Q9UN42 357 aaPredicted RBP6.08□□□□□ -1.44
LINC01278-202ENST00000608623 TRIM41Q8WV44 630 aa6.06□□□□□ -1.44
LINC01278-202ENST00000608623 TRHP20396 242 aaPredicted RBP6.05□□□□□ -1.44
LINC01278-202ENST00000608623 RANGAP1P46060 587 aaPredicted RBP6.05□□□□□ -1.44
LINC01278-202ENST00000608623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.04□□□□□ -1.44
LINC01278-202ENST00000608623 HNRNPUL2Q1KMD3 747 aaKnown RBP6.04□□□□□ -1.44
LINC01278-202ENST00000608623 APLP2Q06481 763 aa5.96□□□□□ -1.45
LINC01278-202ENST00000608623 PLPPR3Q6T4P5 718 aa5.96□□□□□ -1.45
LINC01278-202ENST00000608623 NPM1P06748 294 aaKnown RBP eCLIP5.96□□□□□ -1.46
LINC01278-202ENST00000608623 ERCC6Q03468 1493 aa5.89□□□□□ -1.47
LINC01278-202ENST00000608623 ESF1Q9H501 851 aaKnown RBP5.87□□□□□ -1.47
LINC01278-202ENST00000608623 UBTFP17480 764 aaKnown RBP5.81□□□□□ -1.48
LINC01278-202ENST00000608623 BCANQ96GW7 911 aa5.79□□□□□ -1.48
LINC01278-202ENST00000608623 CHMP7Q8WUX9 453 aaPredicted RBP5.79□□□□□ -1.48
LINC01278-202ENST00000608623 RB1CC1Q8TDY2 1594 aa5.77□□□□□ -1.49
LINC01278-202ENST00000608623 ARID4BQ4LE39 1312 aaPredicted RBP5.76□□□□□ -1.49
LINC01278-202ENST00000608623 SCRIBQ14160 1630 aa5.74□□□□□ -1.49
LINC01278-202ENST00000608623 SCAF1Q9H7N4 1312 aaKnown RBP5.73□□□□□ -1.49
LINC01278-202ENST00000608623 ARID3CA6NKF2 412 aa5.72□□□□□ -1.49
LINC01278-202ENST00000608623 CYB5RLQ6IPT4 315 aa5.69□□□□□ -1.5
LINC01278-202ENST00000608623 SENP3Q9H4L4 574 aaPredicted RBP5.68□□□□□ -1.5
LINC01278-202ENST00000608623 CECR2Q9BXF3 1484 aa5.68□□□□□ -1.5
LINC01278-202ENST00000608623 STAG3Q9UJ98 1225 aa5.67□□□□□ -1.5
LINC01278-202ENST00000608623 OSCARQ8IYS5 282 aa5.66□□□□□ -1.5
LINC01278-202ENST00000608623 KCNH8Q96L42 1107 aa5.63□□□□□ -1.51
LINC01278-202ENST00000608623 DNAJC5BQ9UF47 199 aa5.62□□□□□ -1.51
LINC01278-202ENST00000608623 SLC4A1APQ9BWU0 796 aaKnown RBP5.61□□□□□ -1.51
LINC01278-202ENST00000608623 C14orf37Q86TY3 774 aa5.6□□□□□ -1.51
LINC01278-202ENST00000608623 P3H3Q8IVL6 736 aa5.6□□□□□ -1.51
LINC01278-202ENST00000608623 ZNF777Q9ULD5 760 aaPredicted RBP5.6□□□□□ -1.51
LINC01278-202ENST00000608623 NACADO15069 1562 aa5.58□□□□□ -1.52
LINC01278-202ENST00000608623 CDK11AQ9UQ88 783 aaPredicted RBP5.57□□□□□ -1.52
LINC01278-202ENST00000608623 MLECQ14165 292 aa5.57□□□□□ -1.52
LINC01278-202ENST00000608623 ITGAEP38570 1179 aa5.56□□□□□ -1.52
LINC01278-202ENST00000608623 A0A0G2JS52 829 aa5.56□□□□□ -1.52
LINC01278-202ENST00000608623 CHGAP10645 457 aaKnown RBP5.55□□□□□ -1.52
LINC01278-202ENST00000608623 HAP1P54257 671 aaPredicted RBP5.55□□□□□ -1.52
LINC01278-202ENST00000608623 PDS5BQ9NTI5 1447 aa5.54□□□□□ -1.52
LINC01278-202ENST00000608623 MYT1Q01538 1121 aa5.54□□□□□ -1.52
LINC01278-202ENST00000608623 PLEKHG5O94827 1062 aa5.53□□□□□ -1.52
LINC01278-202ENST00000608623 CCDC180Q9P1Z9 1646 aa5.53□□□□□ -1.52
LINC01278-202ENST00000608623 BAZ1BQ9UIG0 1483 aaKnown RBP5.52□□□□□ -1.53
LINC01278-202ENST00000608623 PPP1R15AO75807 674 aaPredicted RBP5.49□□□□□ -1.53
LINC01278-202ENST00000608623 DCAF8L1A6NGE4 600 aa5.47□□□□□ -1.53
LINC01278-202ENST00000608623 PPP6R1Q9UPN7 881 aa5.47□□□□□ -1.53
LINC01278-202ENST00000608623 FAM69CQ0P6D2 419 aa5.47□□□□□ -1.53
LINC01278-202ENST00000608623 POLR3GLQ9BT43 218 aa5.47□□□□□ -1.53
LINC01278-202ENST00000608623 ADRA2BP18089 450 aa5.46□□□□□ -1.54
LINC01278-202ENST00000608623 SLC24A1O60721 1099 aa5.46□□□□□ -1.54
LINC01278-202ENST00000608623 PLEKHD1A6NEE1 506 aa5.46□□□□□ -1.54
LINC01278-202ENST00000608623 FAM50AQ14320 339 aaKnown RBP5.46□□□□□ -1.54
LINC01278-202ENST00000608623 TRIM52Q96A61 297 aa5.46□□□□□ -1.54
LINC01278-202ENST00000608623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.44□□□□□ -1.54
LINC01278-202ENST00000608623 SMARCA2P51531 1590 aa5.42□□□□□ -1.54
LINC01278-202ENST00000608623 MEX3CQ5U5Q3 659 aaKnown RBP5.42□□□□□ -1.54
LINC01278-202ENST00000608623 ZBTB7CA1YPR0 619 aa5.42□□□□□ -1.54
LINC01278-202ENST00000608623 FOXD1Q16676 465 aa5.42□□□□□ -1.54
LINC01278-202ENST00000608623 LMOD2Q6P5Q4 547 aa5.42□□□□□ -1.54
LINC01278-202ENST00000608623 DNAJC5Q9H3Z4 198 aa5.42□□□□□ -1.54
LINC01278-202ENST00000608623 TSPY4P0CV99 314 aa5.4□□□□□ -1.55
LINC01278-202ENST00000608623 TSPY10P0CW01 314 aa5.4□□□□□ -1.55
LINC01278-202ENST00000608623 CCDC9Q9Y3X0 531 aaKnown RBP5.39□□□□□ -1.55
LINC01278-202ENST00000608623 ZNF326Q5BKZ1 582 aaKnown RBP5.39□□□□□ -1.55
LINC01278-202ENST00000608623 PPARGC1BQ86YN6 1023 aaKnown RBP5.38□□□□□ -1.55
LINC01278-202ENST00000608623 TDRD9Q8NDG6 1382 aaKnown RBP5.37□□□□□ -1.55
LINC01278-202ENST00000608623 CNGB1Q14028 1251 aaPredicted RBP5.37□□□□□ -1.55
LINC01278-202ENST00000608623 NPM2Q86SE8 214 aaKnown RBP5.35□□□□□ -1.55
LINC01278-202ENST00000608623 CEP164Q9UPV0 1460 aa5.35□□□□□ -1.55
LINC01278-202ENST00000608623 GGT6Q6P531 493 aa5.35□□□□□ -1.55
LINC01278-202ENST00000608623 CADPSQ9ULU8 1353 aa5.34□□□□□ -1.55
LINC01278-202ENST00000608623 PIP4K2BP78356 416 aa5.34□□□□□ -1.55
LINC01278-202ENST00000608623 HDGFP51858 240 aaKnown RBP5.34□□□□□ -1.56
LINC01278-202ENST00000608623 ZCCHC6Q5VYS8 1495 aaKnown RBP5.34□□□□□ -1.56
LINC01278-202ENST00000608623 CARMIL2Q6F5E8 1435 aa5.33□□□□□ -1.56
LINC01278-202ENST00000608623 JPH4Q96JJ6 628 aa5.32□□□□□ -1.56
LINC01278-202ENST00000608623 SOGA1O94964 1423 aa5.32□□□□□ -1.56
LINC01278-202ENST00000608623 SF3B2Q13435 895 aaKnown RBP5.32□□□□□ -1.56
LINC01278-202ENST00000608623 EIF4G1Q04637 1599 aaKnown RBP5.31□□□□□ -1.56
LINC01278-202ENST00000608623 CSRNP3Q8WYN3 585 aa5.31□□□□□ -1.56
LINC01278-202ENST00000608623 EID1Q9Y6B2 187 aa5.31□□□□□ -1.56
LINC01278-202ENST00000608623 PCGF6Q9BYE7 350 aa5.29□□□□□ -1.56
LINC01278-202ENST00000608623 NPHP1O15259 732 aa5.29□□□□□ -1.56
LINC01278-202ENST00000608623 CC2D2AQ9P2K1 1620 aa5.29□□□□□ -1.56
LINC01278-202ENST00000608623 ZBTB22O15209 634 aa5.28□□□□□ -1.56
LINC01278-202ENST00000608623 KLHL34Q8N239 644 aa5.28□□□□□ -1.56
LINC01278-202ENST00000608623 CFDP1Q9UEE9 299 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms