RNA–Protein interactions for RNA: ENST00000608110.5

LINC00635-215, long intergenic non-protein coding RNA 635, humanhuman

TSL 5

Gene LINC00635, Length 349 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00635-215ENST00000608110 AEBP2Q6ZN18 517 aaPredicted RBP20.7■□□□□ 0.9
LINC00635-215ENST00000608110 CHIC1Q5VXU3 224 aa20.63■□□□□ 0.89
LINC00635-215ENST00000608110 PHF23Q9BUL5 403 aaPredicted RBP18.26■□□□□ 0.51
LINC00635-215ENST00000608110 SENP3Q9H4L4 574 aaPredicted RBP17.38■□□□□ 0.37
LINC00635-215ENST00000608110 PLPPR3Q6T4P5 718 aa16.94■□□□□ 0.3
LINC00635-215ENST00000608110 FOXD1Q16676 465 aa16.14■□□□□ 0.17
LINC00635-215ENST00000608110 ADRA2BP18089 450 aa15.96■□□□□ 0.15
LINC00635-215ENST00000608110 PPP6R1Q9UPN7 881 aa15.96■□□□□ 0.15
LINC00635-215ENST00000608110 PIAS4Q8N2W9 510 aaPredicted RBP15.32■□□□□ 0.04
LINC00635-215ENST00000608110 KCNA4P22459 653 aa15.27■□□□□ 0.04
LINC00635-215ENST00000608110 PPP4R3CPQ6ZMV5 832 aa15.02■□□□□ -0
LINC00635-215ENST00000608110 EHMT2Q96KQ7 1210 aa14.78□□□□□ -0.04
LINC00635-215ENST00000608110 NCBP3Q53F19 620 aaKnown RBP14.71□□□□□ -0.05
LINC00635-215ENST00000608110 MSH5O43196 834 aa14.61□□□□□ -0.07
LINC00635-215ENST00000608110 SLC4A1APQ9BWU0 796 aaKnown RBP14.59□□□□□ -0.07
LINC00635-215ENST00000608110 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
LINC00635-215ENST00000608110 SCAF1Q9H7N4 1312 aaKnown RBP14.48□□□□□ -0.09
LINC00635-215ENST00000608110 CNKSR2Q8WXI2 1034 aa14.46□□□□□ -0.09
LINC00635-215ENST00000608110 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
LINC00635-215ENST00000608110 MAPK8IP2Q13387 824 aaPredicted RBP14.36□□□□□ -0.11
LINC00635-215ENST00000608110 ZBTB22O15209 634 aa14.09□□□□□ -0.15
LINC00635-215ENST00000608110 RNF216Q9NWF9 866 aaPredicted RBP14.06□□□□□ -0.16
LINC00635-215ENST00000608110 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
LINC00635-215ENST00000608110 DMRT2Q9Y5R5 561 aa13.98□□□□□ -0.17
LINC00635-215ENST00000608110 HOXD11P31277 338 aaPredicted RBP13.88□□□□□ -0.19
LINC00635-215ENST00000608110 FOXD4L1Q9NU39 408 aa13.86□□□□□ -0.19
LINC00635-215ENST00000608110 SLC4A2P04920 1241 aa13.66□□□□□ -0.22
LINC00635-215ENST00000608110 NISCHQ9Y2I1 1504 aa13.5□□□□□ -0.25
LINC00635-215ENST00000608110 MYCNP04198 464 aaPredicted RBP13.41□□□□□ -0.26
LINC00635-215ENST00000608110 DCAF8L1A6NGE4 600 aa13.36□□□□□ -0.27
LINC00635-215ENST00000608110 ATXN8OSP0DMR3 200 aa13.3□□□□□ -0.28
LINC00635-215ENST00000608110 ABCC9O60706 1549 aa13.29□□□□□ -0.28
LINC00635-215ENST00000608110 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.22□□□□□ -0.29
LINC00635-215ENST00000608110 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
LINC00635-215ENST00000608110 U3KPZ7 1027 aaPredicted RBP13.1□□□□□ -0.31
LINC00635-215ENST00000608110 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.01□□□□□ -0.33
LINC00635-215ENST00000608110 HNRNPUL2Q1KMD3 747 aaKnown RBP13.01□□□□□ -0.33
LINC00635-215ENST00000608110 SAMD1Q6SPF0 538 aaPredicted RBP13.01□□□□□ -0.33
LINC00635-215ENST00000608110 FKBP8Q14318 412 aa12.95□□□□□ -0.34
LINC00635-215ENST00000608110 ZNF219Q9P2Y4 722 aaPredicted RBP12.78□□□□□ -0.36
LINC00635-215ENST00000608110 APLP2Q06481 763 aa12.73□□□□□ -0.37
LINC00635-215ENST00000608110 RTN4Q9NQC3 1192 aaKnown RBP12.69□□□□□ -0.38
LINC00635-215ENST00000608110 AMER1Q5JTC6 1135 aaPredicted RBP12.62□□□□□ -0.39
LINC00635-215ENST00000608110 RNF39Q9H2S5 420 aa12.61□□□□□ -0.39
LINC00635-215ENST00000608110 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
LINC00635-215ENST00000608110 TRHP20396 242 aaPredicted RBP12.57□□□□□ -0.4
LINC00635-215ENST00000608110 MKRN4PQ13434 485 aaPredicted RBP12.54□□□□□ -0.4
LINC00635-215ENST00000608110 POTEDQ86YR6 584 aa12.51□□□□□ -0.41
LINC00635-215ENST00000608110 DNAJC5Q9H3Z4 198 aa12.5□□□□□ -0.41
LINC00635-215ENST00000608110 CAPN15O75808 1086 aa12.49□□□□□ -0.41
LINC00635-215ENST00000608110 POLA2Q14181 598 aa12.48□□□□□ -0.41
LINC00635-215ENST00000608110 CCDC180Q9P1Z9 1646 aa12.48□□□□□ -0.41
LINC00635-215ENST00000608110 SPDYE4A6NLX3 237 aa12.45□□□□□ -0.42
LINC00635-215ENST00000608110 C1QBPQ07021 282 aaKnown RBP12.45□□□□□ -0.42
LINC00635-215ENST00000608110 FBLN2P98095 1184 aa12.41□□□□□ -0.42
LINC00635-215ENST00000608110 ABCB7O75027 752 aa12.33□□□□□ -0.44
LINC00635-215ENST00000608110 PROM2Q8N271 834 aa12.32□□□□□ -0.44
LINC00635-215ENST00000608110 FBXO3Q9UK99 471 aa12.29□□□□□ -0.44
LINC00635-215ENST00000608110 RB1CC1Q8TDY2 1594 aa12.25□□□□□ -0.45
LINC00635-215ENST00000608110 PABPN1Q86U42 306 aaKnown RBP eCLIP12.22□□□□□ -0.45
LINC00635-215ENST00000608110 ZBTB12Q9Y330 459 aaPredicted RBP12.22□□□□□ -0.45
LINC00635-215ENST00000608110 SLC24A1O60721 1099 aa12.21□□□□□ -0.45
LINC00635-215ENST00000608110 DSG3P32926 999 aa12.19□□□□□ -0.46
LINC00635-215ENST00000608110 VASPP50552 380 aaPredicted RBP12.16□□□□□ -0.46
LINC00635-215ENST00000608110 IFNLR1Q8IU57 520 aaPredicted RBP12.07□□□□□ -0.48
LINC00635-215ENST00000608110 OSCARQ8IYS5 282 aa12.03□□□□□ -0.48
LINC00635-215ENST00000608110 ZNF692Q9BU19 519 aaPredicted RBP12.03□□□□□ -0.48
LINC00635-215ENST00000608110 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.49
LINC00635-215ENST00000608110 UNC13AQ9UPW8 1703 aa11.98□□□□□ -0.49
LINC00635-215ENST00000608110 SPDYE2BA6NHP3 402 aa11.97□□□□□ -0.49
LINC00635-215ENST00000608110 SPDYE6P0CI01 402 aa11.97□□□□□ -0.49
LINC00635-215ENST00000608110 SPDYE2Q495Y8 402 aa11.97□□□□□ -0.49
LINC00635-215ENST00000608110 SSUH2Q9Y2M2 353 aa11.96□□□□□ -0.49
LINC00635-215ENST00000608110 NACADO15069 1562 aa11.94□□□□□ -0.5
LINC00635-215ENST00000608110 CC2D2AQ9P2K1 1620 aa11.93□□□□□ -0.5
LINC00635-215ENST00000608110 BICRAQ9NZM4 1560 aa11.93□□□□□ -0.5
LINC00635-215ENST00000608110 CACNB1Q02641 598 aaPredicted RBP11.92□□□□□ -0.5
LINC00635-215ENST00000608110 PKD2Q13563 968 aa11.86□□□□□ -0.51
LINC00635-215ENST00000608110 STAG3Q9UJ98 1225 aa11.86□□□□□ -0.51
LINC00635-215ENST00000608110 KLHL34Q8N239 644 aa11.83□□□□□ -0.52
LINC00635-215ENST00000608110 SPOCK2Q92563 424 aa11.79□□□□□ -0.52
LINC00635-215ENST00000608110 PLCD3Q8N3E9 789 aa11.78□□□□□ -0.52
LINC00635-215ENST00000608110 TRIM41Q8WV44 630 aa11.78□□□□□ -0.52
LINC00635-215ENST00000608110 DCAF8L2P0C7V8 631 aa11.77□□□□□ -0.53
LINC00635-215ENST00000608110 MIER1Q8N108 512 aa11.76□□□□□ -0.53
LINC00635-215ENST00000608110 EIF4G1Q04637 1599 aaKnown RBP11.71□□□□□ -0.53
LINC00635-215ENST00000608110 CUX2O14529 1486 aa11.7□□□□□ -0.54
LINC00635-215ENST00000608110 PLCB2Q00722 1185 aa11.69□□□□□ -0.54
LINC00635-215ENST00000608110 ECM2O94769 699 aaPredicted RBP11.66□□□□□ -0.54
LINC00635-215ENST00000608110 SHROOM4Q9ULL8 1493 aa11.63□□□□□ -0.55
LINC00635-215ENST00000608110 PLEKHG5O94827 1062 aa11.58□□□□□ -0.56
LINC00635-215ENST00000608110 RGL2O15211 777 aa11.56□□□□□ -0.56
LINC00635-215ENST00000608110 ZBTB47Q9UFB7 747 aaPredicted RBP11.56□□□□□ -0.56
LINC00635-215ENST00000608110 CIZ1Q9ULV3 898 aaPredicted RBP11.55□□□□□ -0.56
LINC00635-215ENST00000608110 NPM1P06748 294 aaKnown RBP eCLIP11.54□□□□□ -0.56
LINC00635-215ENST00000608110 HAP1P54257 671 aaPredicted RBP11.54□□□□□ -0.56
LINC00635-215ENST00000608110 ERCC6Q03468 1493 aa11.53□□□□□ -0.56
LINC00635-215ENST00000608110 AKT1S1Q96B36 256 aa11.52□□□□□ -0.57
LINC00635-215ENST00000608110 RBM42Q9BTD8 480 aaKnown RBP11.52□□□□□ -0.57
LINC00635-215ENST00000608110 SPDYE1Q8NFV5 336 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms