RNA–Protein interactions for RNA: ENST00000594346.1

FARP1-210, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

Gene FARP1, Length 2,692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-210ENST00000594346 NISCHQ9Y2I1 1504 aa27.64■■■□□ 2.01
FARP1-210ENST00000594346 SHROOM4Q9ULL8 1493 aa23.9■■□□□ 1.42
FARP1-210ENST00000594346 SUPT5HO00267 1087 aaKnown RBP23.61■■□□□ 1.37
FARP1-210ENST00000594346 ZCCHC6Q5VYS8 1495 aaKnown RBP23.42■■□□□ 1.34
FARP1-210ENST00000594346 CCDC180Q9P1Z9 1646 aa23.31■■□□□ 1.32
FARP1-210ENST00000594346 HRCP23327 699 aa23.14■■□□□ 1.29
FARP1-210ENST00000594346 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
FARP1-210ENST00000594346 CHIC1Q5VXU3 224 aa22.97■■□□□ 1.27
FARP1-210ENST00000594346 PCGF6Q9BYE7 350 aa22.95■■□□□ 1.27
FARP1-210ENST00000594346 PPARGC1BQ86YN6 1023 aaKnown RBP22.94■■□□□ 1.26
FARP1-210ENST00000594346 DCAF8L2P0C7V8 631 aa22.87■■□□□ 1.25
FARP1-210ENST00000594346 DCAF1Q9Y4B6 1507 aa22.7■■□□□ 1.22
FARP1-210ENST00000594346 LOC105371045A0A1W2PR82 267 aa22.61■■□□□ 1.21
FARP1-210ENST00000594346 PELP1Q8IZL8 1130 aaKnown RBP22.28■■□□□ 1.16
FARP1-210ENST00000594346 ABCC9O60706 1549 aa22.12■■□□□ 1.13
FARP1-210ENST00000594346 TRIM26Q12899 539 aaPredicted RBP22.08■■□□□ 1.12
FARP1-210ENST00000594346 RSF1Q96T23 1441 aaPredicted RBP21.99■■□□□ 1.11
FARP1-210ENST00000594346 EHMT2Q96KQ7 1210 aa21.99■■□□□ 1.11
FARP1-210ENST00000594346 FAM9AQ8IZU1 332 aaPredicted RBP21.92■■□□□ 1.1
FARP1-210ENST00000594346 SCRIBQ14160 1630 aa21.89■■□□□ 1.09
FARP1-210ENST00000594346 ZEB1P37275 1124 aaPredicted RBP21.87■■□□□ 1.09
FARP1-210ENST00000594346 TRIM41Q8WV44 630 aa21.87■■□□□ 1.09
FARP1-210ENST00000594346 SCAF1Q9H7N4 1312 aaKnown RBP21.81■■□□□ 1.08
FARP1-210ENST00000594346 RB1CC1Q8TDY2 1594 aa21.77■■□□□ 1.08
FARP1-210ENST00000594346 NACADO15069 1562 aa21.55■■□□□ 1.04
FARP1-210ENST00000594346 CECR2Q9BXF3 1484 aa21.52■■□□□ 1.04
FARP1-210ENST00000594346 MROH2BQ7Z745 1585 aa21.48■■□□□ 1.03
FARP1-210ENST00000594346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.44■■□□□ 1.02
FARP1-210ENST00000594346 MYT1Q01538 1121 aa21.42■■□□□ 1.02
FARP1-210ENST00000594346 ACIN1Q9UKV3 1341 aaKnown RBP21.34■■□□□ 1.01
FARP1-210ENST00000594346 TTBK1Q5TCY1 1321 aaPredicted RBP21.34■■□□□ 1.01
FARP1-210ENST00000594346 WIZO95785 1651 aa21.33■■□□□ 1.01
FARP1-210ENST00000594346 NEUROD1Q13562 356 aa21.3■■□□□ 1
FARP1-210ENST00000594346 BAZ1AQ9NRL2 1556 aaPredicted RBP21.25■□□□□ 0.99
FARP1-210ENST00000594346 CCER1Q8TC90 406 aaPredicted RBP21.22■□□□□ 0.99
FARP1-210ENST00000594346 EIF4G1Q04637 1599 aaKnown RBP21.16■□□□□ 0.98
FARP1-210ENST00000594346 GTF3C3Q9Y5Q9 886 aa21.14■□□□□ 0.98
FARP1-210ENST00000594346 CENPBP07199 599 aaPredicted RBP21.13■□□□□ 0.97
FARP1-210ENST00000594346 DIEXFQ68CQ4 756 aaKnown RBP21.06■□□□□ 0.96
FARP1-210ENST00000594346 TOP2AP11388 1531 aaKnown RBP21.05■□□□□ 0.96
FARP1-210ENST00000594346 WRNQ14191 1432 aaPredicted RBP eCLIP21.01■□□□□ 0.95
FARP1-210ENST00000594346 CCDC88BA6NC98 1476 aa20.99■□□□□ 0.95
FARP1-210ENST00000594346 ABCC8Q09428 1581 aa20.97■□□□□ 0.95
FARP1-210ENST00000594346 SMARCA4P51532 1647 aa20.95■□□□□ 0.94
FARP1-210ENST00000594346 CEP162Q5TB80 1403 aa20.93■□□□□ 0.94
FARP1-210ENST00000594346 SMARCA2P51531 1590 aa20.92■□□□□ 0.94
FARP1-210ENST00000594346 TNIKQ9UKE5 1360 aa20.92■□□□□ 0.94
FARP1-210ENST00000594346 EEA1Q15075 1411 aa20.89■□□□□ 0.94
FARP1-210ENST00000594346 SOGA1O94964 1423 aa20.88■□□□□ 0.93
FARP1-210ENST00000594346 YTHDC1Q96MU7 727 aaKnown RBP20.88■□□□□ 0.93
FARP1-210ENST00000594346 CSRNP3Q8WYN3 585 aa20.86■□□□□ 0.93
FARP1-210ENST00000594346 UBTFP17480 764 aaKnown RBP20.79■□□□□ 0.92
FARP1-210ENST00000594346 RUSC2Q8N2Y8 1516 aa20.73■□□□□ 0.91
FARP1-210ENST00000594346 GOLGA3Q08378 1498 aa20.72■□□□□ 0.91
FARP1-210ENST00000594346 UNC13AQ9UPW8 1703 aa20.69■□□□□ 0.9
FARP1-210ENST00000594346 ZNF316A6NFI3 1004 aaPredicted RBP20.69■□□□□ 0.9
FARP1-210ENST00000594346 MIER1Q8N108 512 aa20.67■□□□□ 0.9
FARP1-210ENST00000594346 HNRNPUL2Q1KMD3 747 aaKnown RBP20.65■□□□□ 0.9
FARP1-210ENST00000594346 CEP164Q9UPV0 1460 aa20.58■□□□□ 0.89
FARP1-210ENST00000594346 PEG3Q9GZU2 1588 aa20.57■□□□□ 0.88
FARP1-210ENST00000594346 PABPN1Q86U42 306 aaKnown RBP eCLIP20.55■□□□□ 0.88
FARP1-210ENST00000594346 RANGAP1P46060 587 aaPredicted RBP20.52■□□□□ 0.88
FARP1-210ENST00000594346 KIF21BO75037 1637 aa20.51■□□□□ 0.87
FARP1-210ENST00000594346 BICRAQ9NZM4 1560 aa20.5■□□□□ 0.87
FARP1-210ENST00000594346 CLIP1P30622 1438 aa20.5■□□□□ 0.87
FARP1-210ENST00000594346 SYNJ1O43426 1573 aa20.47■□□□□ 0.87
FARP1-210ENST00000594346 VPS8Q8N3P4 1428 aa20.44■□□□□ 0.86
FARP1-210ENST00000594346 APLP2Q06481 763 aa20.43■□□□□ 0.86
FARP1-210ENST00000594346 BAZ1BQ9UIG0 1483 aaKnown RBP20.43■□□□□ 0.86
FARP1-210ENST00000594346 ATAD2BQ9ULI0 1458 aa20.4■□□□□ 0.86
FARP1-210ENST00000594346 RAPGEF2Q9Y4G8 1499 aa20.35■□□□□ 0.85
FARP1-210ENST00000594346 TOP2BQ02880 1626 aa20.23■□□□□ 0.83
FARP1-210ENST00000594346 CLSPNQ9HAW4 1339 aa20.22■□□□□ 0.83
FARP1-210ENST00000594346 ERICH3Q5RHP9 1530 aa20.16■□□□□ 0.82
FARP1-210ENST00000594346 SUPT16HQ9Y5B9 1047 aaKnown RBP20.16■□□□□ 0.82
FARP1-210ENST00000594346 PRXQ9BXM0 1461 aa20.16■□□□□ 0.82
FARP1-210ENST00000594346 BIVM-ERCC5R4GMW8 1640 aa20.12■□□□□ 0.81
FARP1-210ENST00000594346 DHX57Q6P158 1386 aaKnown RBP20.11■□□□□ 0.81
FARP1-210ENST00000594346 KCNH8Q96L42 1107 aa20.1■□□□□ 0.81
FARP1-210ENST00000594346 ARAP1Q96P48 1450 aa20.09■□□□□ 0.81
FARP1-210ENST00000594346 KANK4Q5T7N3 995 aaPredicted RBP20.08■□□□□ 0.81
FARP1-210ENST00000594346 ANP32EQ9BTT0 268 aa20.08■□□□□ 0.8
FARP1-210ENST00000594346 TSHZ2Q9NRE2 1034 aa20.03■□□□□ 0.8
FARP1-210ENST00000594346 KIF27Q86VH2 1401 aa20.02■□□□□ 0.8
FARP1-210ENST00000594346 RRBP1Q9P2E9 1410 aaKnown RBP20.01■□□□□ 0.79
FARP1-210ENST00000594346 ITGAEP38570 1179 aa20■□□□□ 0.79
FARP1-210ENST00000594346 NCAPD3P42695 1498 aa19.97■□□□□ 0.79
FARP1-210ENST00000594346 CUX1P39880 1505 aa19.97■□□□□ 0.79
FARP1-210ENST00000594346 HMGXB3Q12766 1538 aa19.95■□□□□ 0.78
FARP1-210ENST00000594346 BCANQ96GW7 911 aa19.94■□□□□ 0.78
FARP1-210ENST00000594346 BCL11AQ9H165 835 aa19.94■□□□□ 0.78
FARP1-210ENST00000594346 CUX2O14529 1486 aa19.94■□□□□ 0.78
FARP1-210ENST00000594346 CCNB3Q8WWL7 1395 aa19.93■□□□□ 0.78
FARP1-210ENST00000594346 ARHGAP35Q9NRY4 1499 aa19.89■□□□□ 0.77
FARP1-210ENST00000594346 CFTRP13569 1480 aa19.88■□□□□ 0.77
FARP1-210ENST00000594346 HIRIP3Q9BW71 556 aaPredicted RBP19.79■□□□□ 0.76
FARP1-210ENST00000594346 IGF1RP08069 1367 aa19.77■□□□□ 0.76
FARP1-210ENST00000594346 RAB3GAP2Q9H2M9 1393 aa19.77■□□□□ 0.76
FARP1-210ENST00000594346 MAP3K1Q13233 1512 aa19.77■□□□□ 0.75
FARP1-210ENST00000594346 DDX10Q13206 875 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms