RNA–Protein interactions for RNA: ENST00000592423.1

RDH13-220, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 2,811 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-220ENST00000592423 NISCHQ9Y2I1 1504 aa24.61■■□□□ 1.53
RDH13-220ENST00000592423 SHROOM4Q9ULL8 1493 aa21.89■■□□□ 1.1
RDH13-220ENST00000592423 SUPT5HO00267 1087 aaKnown RBP21.68■■□□□ 1.06
RDH13-220ENST00000592423 CCDC180Q9P1Z9 1646 aa21.53■■□□□ 1.04
RDH13-220ENST00000592423 HRCP23327 699 aa21.26■□□□□ 0.99
RDH13-220ENST00000592423 MYO15BQ96JP2 1530 aa21.19■□□□□ 0.98
RDH13-220ENST00000592423 PCGF6Q9BYE7 350 aa21.13■□□□□ 0.97
RDH13-220ENST00000592423 CHIC1Q5VXU3 224 aa21.09■□□□□ 0.97
RDH13-220ENST00000592423 PPARGC1BQ86YN6 1023 aaKnown RBP21.06■□□□□ 0.96
RDH13-220ENST00000592423 DCAF8L2P0C7V8 631 aa20.88■□□□□ 0.93
RDH13-220ENST00000592423 ZCCHC6Q5VYS8 1495 aaKnown RBP20.86■□□□□ 0.93
RDH13-220ENST00000592423 LOC105371045A0A1W2PR82 267 aa20.71■□□□□ 0.91
RDH13-220ENST00000592423 DCAF1Q9Y4B6 1507 aa20.46■□□□□ 0.87
RDH13-220ENST00000592423 TRIM26Q12899 539 aaPredicted RBP20.36■□□□□ 0.85
RDH13-220ENST00000592423 ABCC9O60706 1549 aa20.29■□□□□ 0.84
RDH13-220ENST00000592423 EHMT2Q96KQ7 1210 aa20.15■□□□□ 0.82
RDH13-220ENST00000592423 FAM9AQ8IZU1 332 aaPredicted RBP20.11■□□□□ 0.81
RDH13-220ENST00000592423 NACADO15069 1562 aa20.1■□□□□ 0.81
RDH13-220ENST00000592423 SCAF1Q9H7N4 1312 aaKnown RBP20.03■□□□□ 0.8
RDH13-220ENST00000592423 RB1CC1Q8TDY2 1594 aa19.99■□□□□ 0.79
RDH13-220ENST00000592423 ZEB1P37275 1124 aaPredicted RBP19.98■□□□□ 0.79
RDH13-220ENST00000592423 TRIM41Q8WV44 630 aa19.97■□□□□ 0.79
RDH13-220ENST00000592423 PELP1Q8IZL8 1130 aaKnown RBP19.86■□□□□ 0.77
RDH13-220ENST00000592423 RSF1Q96T23 1441 aaPredicted RBP19.77■□□□□ 0.75
RDH13-220ENST00000592423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.71■□□□□ 0.74
RDH13-220ENST00000592423 SCRIBQ14160 1630 aa19.68■□□□□ 0.74
RDH13-220ENST00000592423 NEUROD1Q13562 356 aa19.61■□□□□ 0.73
RDH13-220ENST00000592423 CCER1Q8TC90 406 aaPredicted RBP19.59■□□□□ 0.73
RDH13-220ENST00000592423 TTBK1Q5TCY1 1321 aaPredicted RBP19.58■□□□□ 0.72
RDH13-220ENST00000592423 ACIN1Q9UKV3 1341 aaKnown RBP19.57■□□□□ 0.72
RDH13-220ENST00000592423 UNC13AQ9UPW8 1703 aa19.49■□□□□ 0.71
RDH13-220ENST00000592423 GTF3C3Q9Y5Q9 886 aa19.47■□□□□ 0.71
RDH13-220ENST00000592423 DIEXFQ68CQ4 756 aaKnown RBP19.43■□□□□ 0.7
RDH13-220ENST00000592423 CECR2Q9BXF3 1484 aa19.39■□□□□ 0.69
RDH13-220ENST00000592423 BICRAQ9NZM4 1560 aa19.33■□□□□ 0.69
RDH13-220ENST00000592423 CENPBP07199 599 aaPredicted RBP19.31■□□□□ 0.68
RDH13-220ENST00000592423 MROH2BQ7Z745 1585 aa19.29■□□□□ 0.68
RDH13-220ENST00000592423 YTHDC1Q96MU7 727 aaKnown RBP19.26■□□□□ 0.67
RDH13-220ENST00000592423 WIZO95785 1651 aa19.24■□□□□ 0.67
RDH13-220ENST00000592423 ABCC8Q09428 1581 aa19.09■□□□□ 0.65
RDH13-220ENST00000592423 ZNF316A6NFI3 1004 aaPredicted RBP19.08■□□□□ 0.65
RDH13-220ENST00000592423 CEP162Q5TB80 1403 aa19.06■□□□□ 0.64
RDH13-220ENST00000592423 CCDC88BA6NC98 1476 aa19.05■□□□□ 0.64
RDH13-220ENST00000592423 UBTFP17480 764 aaKnown RBP19.02■□□□□ 0.64
RDH13-220ENST00000592423 MIER1Q8N108 512 aa19.01■□□□□ 0.63
RDH13-220ENST00000592423 SOGA1O94964 1423 aa19■□□□□ 0.63
RDH13-220ENST00000592423 HNRNPUL2Q1KMD3 747 aaKnown RBP18.99■□□□□ 0.63
RDH13-220ENST00000592423 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
RDH13-220ENST00000592423 WRNQ14191 1432 aaPredicted RBP eCLIP18.98■□□□□ 0.63
RDH13-220ENST00000592423 BAZ1AQ9NRL2 1556 aaPredicted RBP18.95■□□□□ 0.62
RDH13-220ENST00000592423 RUSC2Q8N2Y8 1516 aa18.93■□□□□ 0.62
RDH13-220ENST00000592423 MYT1Q01538 1121 aa18.91■□□□□ 0.62
RDH13-220ENST00000592423 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
RDH13-220ENST00000592423 TNIKQ9UKE5 1360 aa18.88■□□□□ 0.61
RDH13-220ENST00000592423 RANGAP1P46060 587 aaPredicted RBP18.82■□□□□ 0.6
RDH13-220ENST00000592423 PABPN1Q86U42 306 aaKnown RBP eCLIP18.8■□□□□ 0.6
RDH13-220ENST00000592423 TOP2AP11388 1531 aaKnown RBP18.75■□□□□ 0.59
RDH13-220ENST00000592423 SMARCA2P51531 1590 aa18.74■□□□□ 0.59
RDH13-220ENST00000592423 GOLGA3Q08378 1498 aa18.69■□□□□ 0.58
RDH13-220ENST00000592423 SMARCA4P51532 1647 aa18.64■□□□□ 0.57
RDH13-220ENST00000592423 PEG3Q9GZU2 1588 aa18.64■□□□□ 0.57
RDH13-220ENST00000592423 EEA1Q15075 1411 aa18.63■□□□□ 0.57
RDH13-220ENST00000592423 SLC24A1O60721 1099 aa18.62■□□□□ 0.57
RDH13-220ENST00000592423 APLP2Q06481 763 aa18.61■□□□□ 0.57
RDH13-220ENST00000592423 CLIP1P30622 1438 aa18.6■□□□□ 0.57
RDH13-220ENST00000592423 CC2D2AQ9P2K1 1620 aa18.58■□□□□ 0.56
RDH13-220ENST00000592423 SUPT16HQ9Y5B9 1047 aaKnown RBP18.55■□□□□ 0.56
RDH13-220ENST00000592423 CEP164Q9UPV0 1460 aa18.5■□□□□ 0.55
RDH13-220ENST00000592423 VPS8Q8N3P4 1428 aa18.5■□□□□ 0.55
RDH13-220ENST00000592423 HMGXB3Q12766 1538 aa18.49■□□□□ 0.55
RDH13-220ENST00000592423 NCAPD3P42695 1498 aa18.48■□□□□ 0.55
RDH13-220ENST00000592423 SYNJ1O43426 1573 aa18.47■□□□□ 0.55
RDH13-220ENST00000592423 RAPGEF2Q9Y4G8 1499 aa18.46■□□□□ 0.55
RDH13-220ENST00000592423 DHX57Q6P158 1386 aaKnown RBP18.42■□□□□ 0.54
RDH13-220ENST00000592423 KCNH8Q96L42 1107 aa18.41■□□□□ 0.54
RDH13-220ENST00000592423 ATAD2BQ9ULI0 1458 aa18.4■□□□□ 0.54
RDH13-220ENST00000592423 TSHZ2Q9NRE2 1034 aa18.4■□□□□ 0.54
RDH13-220ENST00000592423 KIF21BO75037 1637 aa18.4■□□□□ 0.54
RDH13-220ENST00000592423 KANK4Q5T7N3 995 aaPredicted RBP18.38■□□□□ 0.53
RDH13-220ENST00000592423 BCANQ96GW7 911 aa18.38■□□□□ 0.53
RDH13-220ENST00000592423 ITGAEP38570 1179 aa18.38■□□□□ 0.53
RDH13-220ENST00000592423 DNAJC5BQ9UF47 199 aa18.34■□□□□ 0.53
RDH13-220ENST00000592423 BAZ1BQ9UIG0 1483 aaKnown RBP18.27■□□□□ 0.52
RDH13-220ENST00000592423 CLSPNQ9HAW4 1339 aa18.26■□□□□ 0.51
RDH13-220ENST00000592423 ANP32EQ9BTT0 268 aa18.23■□□□□ 0.51
RDH13-220ENST00000592423 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
RDH13-220ENST00000592423 FKBP8Q14318 412 aa18.19■□□□□ 0.5
RDH13-220ENST00000592423 DDX10Q13206 875 aaKnown RBP18.17■□□□□ 0.5
RDH13-220ENST00000592423 HIRIP3Q9BW71 556 aaPredicted RBP18.15■□□□□ 0.5
RDH13-220ENST00000592423 CCNB3Q8WWL7 1395 aa18.1■□□□□ 0.49
RDH13-220ENST00000592423 SIN3AQ96ST3 1273 aa18.1■□□□□ 0.49
RDH13-220ENST00000592423 RRBP1Q9P2E9 1410 aaKnown RBP18.09■□□□□ 0.49
RDH13-220ENST00000592423 TRIM52Q96A61 297 aa18.08■□□□□ 0.48
RDH13-220ENST00000592423 RAB3GAP2Q9H2M9 1393 aa18.08■□□□□ 0.48
RDH13-220ENST00000592423 TOP2BQ02880 1626 aa18.05■□□□□ 0.48
RDH13-220ENST00000592423 PRXQ9BXM0 1461 aa18.05■□□□□ 0.48
RDH13-220ENST00000592423 BCL11AQ9H165 835 aa18.04■□□□□ 0.48
RDH13-220ENST00000592423 MAPKBP1O60336 1514 aa18.01■□□□□ 0.47
RDH13-220ENST00000592423 RBM19Q9Y4C8 960 aaKnown RBP17.99■□□□□ 0.47
RDH13-220ENST00000592423 ERICH3Q5RHP9 1530 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms