RNA–Protein interactions for RNA: ENST00000590444.5

DENND1C-208, Transcript of DENN domain containing 1C, humanhuman

TSL 2

Gene DENND1C, Length 2,446 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1C-208ENST00000590444 NISCHQ9Y2I1 1504 aa27.69■■■□□ 2.02
DENND1C-208ENST00000590444 HRCP23327 699 aa24.4■■□□□ 1.5
DENND1C-208ENST00000590444 PPARGC1BQ86YN6 1023 aaKnown RBP23.93■■□□□ 1.42
DENND1C-208ENST00000590444 PCGF6Q9BYE7 350 aa23.82■■□□□ 1.4
DENND1C-208ENST00000590444 CCDC180Q9P1Z9 1646 aa23.82■■□□□ 1.4
DENND1C-208ENST00000590444 SHROOM4Q9ULL8 1493 aa23.74■■□□□ 1.39
DENND1C-208ENST00000590444 SUPT5HO00267 1087 aaKnown RBP23.72■■□□□ 1.39
DENND1C-208ENST00000590444 PELP1Q8IZL8 1130 aaKnown RBP23.72■■□□□ 1.39
DENND1C-208ENST00000590444 MYO15BQ96JP2 1530 aa23.67■■□□□ 1.38
DENND1C-208ENST00000590444 CHIC1Q5VXU3 224 aa23.43■■□□□ 1.34
DENND1C-208ENST00000590444 ZCCHC6Q5VYS8 1495 aaKnown RBP23.34■■□□□ 1.33
DENND1C-208ENST00000590444 SCAF1Q9H7N4 1312 aaKnown RBP23.21■■□□□ 1.31
DENND1C-208ENST00000590444 DCAF1Q9Y4B6 1507 aa23.15■■□□□ 1.3
DENND1C-208ENST00000590444 DCAF8L2P0C7V8 631 aa23.06■■□□□ 1.28
DENND1C-208ENST00000590444 TRIM26Q12899 539 aaPredicted RBP22.97■■□□□ 1.27
DENND1C-208ENST00000590444 LOC105371045A0A1W2PR82 267 aa22.92■■□□□ 1.26
DENND1C-208ENST00000590444 MYT1Q01538 1121 aa22.81■■□□□ 1.24
DENND1C-208ENST00000590444 ZEB1P37275 1124 aaPredicted RBP22.81■■□□□ 1.24
DENND1C-208ENST00000590444 ABCC9O60706 1549 aa22.56■■□□□ 1.2
DENND1C-208ENST00000590444 ACIN1Q9UKV3 1341 aaKnown RBP22.55■■□□□ 1.2
DENND1C-208ENST00000590444 NEUROD1Q13562 356 aa22.5■■□□□ 1.19
DENND1C-208ENST00000590444 GTF3C3Q9Y5Q9 886 aa22.39■■□□□ 1.17
DENND1C-208ENST00000590444 SCRIBQ14160 1630 aa22.28■■□□□ 1.16
DENND1C-208ENST00000590444 CENPBP07199 599 aaPredicted RBP22.18■■□□□ 1.14
DENND1C-208ENST00000590444 NACADO15069 1562 aa22.11■■□□□ 1.13
DENND1C-208ENST00000590444 DIEXFQ68CQ4 756 aaKnown RBP22.07■■□□□ 1.12
DENND1C-208ENST00000590444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.01■■□□□ 1.11
DENND1C-208ENST00000590444 FAM9AQ8IZU1 332 aaPredicted RBP21.94■■□□□ 1.1
DENND1C-208ENST00000590444 CCER1Q8TC90 406 aaPredicted RBP21.94■■□□□ 1.1
DENND1C-208ENST00000590444 TRIM41Q8WV44 630 aa21.89■■□□□ 1.1
DENND1C-208ENST00000590444 RB1CC1Q8TDY2 1594 aa21.88■■□□□ 1.09
DENND1C-208ENST00000590444 EHMT2Q96KQ7 1210 aa21.87■■□□□ 1.09
DENND1C-208ENST00000590444 YTHDC1Q96MU7 727 aaKnown RBP21.74■■□□□ 1.07
DENND1C-208ENST00000590444 RSF1Q96T23 1441 aaPredicted RBP21.71■■□□□ 1.07
DENND1C-208ENST00000590444 CECR2Q9BXF3 1484 aa21.69■■□□□ 1.06
DENND1C-208ENST00000590444 UNC13AQ9UPW8 1703 aa21.67■■□□□ 1.06
DENND1C-208ENST00000590444 ZNF316A6NFI3 1004 aaPredicted RBP21.59■■□□□ 1.05
DENND1C-208ENST00000590444 MROH2BQ7Z745 1585 aa21.55■■□□□ 1.04
DENND1C-208ENST00000590444 MIER1Q8N108 512 aa21.5■■□□□ 1.03
DENND1C-208ENST00000590444 PABPN1Q86U42 306 aaKnown RBP eCLIP21.44■■□□□ 1.02
DENND1C-208ENST00000590444 BCL11AQ9H165 835 aa21.43■■□□□ 1.02
DENND1C-208ENST00000590444 TTBK1Q5TCY1 1321 aaPredicted RBP21.43■■□□□ 1.02
DENND1C-208ENST00000590444 WIZO95785 1651 aa21.42■■□□□ 1.02
DENND1C-208ENST00000590444 BICRAQ9NZM4 1560 aa21.39■■□□□ 1.02
DENND1C-208ENST00000590444 ANP32EQ9BTT0 268 aa21.34■■□□□ 1.01
DENND1C-208ENST00000590444 BAZ1AQ9NRL2 1556 aaPredicted RBP21.29■■□□□ 1
DENND1C-208ENST00000590444 SUPT16HQ9Y5B9 1047 aaKnown RBP21.27■■□□□ 1
DENND1C-208ENST00000590444 SMARCA4P51532 1647 aa21.24■□□□□ 0.99
DENND1C-208ENST00000590444 TSHZ2Q9NRE2 1034 aa21.23■□□□□ 0.99
DENND1C-208ENST00000590444 WRNQ14191 1432 aaPredicted RBP eCLIP21.19■□□□□ 0.98
DENND1C-208ENST00000590444 CSRNP3Q8WYN3 585 aa21.14■□□□□ 0.97
DENND1C-208ENST00000590444 CLSPNQ9HAW4 1339 aa21.14■□□□□ 0.97
DENND1C-208ENST00000590444 CEP162Q5TB80 1403 aa21.05■□□□□ 0.96
DENND1C-208ENST00000590444 TOP2AP11388 1531 aaKnown RBP21.03■□□□□ 0.96
DENND1C-208ENST00000590444 HNRNPUL2Q1KMD3 747 aaKnown RBP20.95■□□□□ 0.94
DENND1C-208ENST00000590444 CCDC88BA6NC98 1476 aa20.92■□□□□ 0.94
DENND1C-208ENST00000590444 SMARCA2P51531 1590 aa20.92■□□□□ 0.94
DENND1C-208ENST00000590444 EIF4G1Q04637 1599 aaKnown RBP20.91■□□□□ 0.94
DENND1C-208ENST00000590444 TNIKQ9UKE5 1360 aa20.87■□□□□ 0.93
DENND1C-208ENST00000590444 PEG3Q9GZU2 1588 aa20.83■□□□□ 0.93
DENND1C-208ENST00000590444 ATAD2BQ9ULI0 1458 aa20.8■□□□□ 0.92
DENND1C-208ENST00000590444 BCANQ96GW7 911 aa20.79■□□□□ 0.92
DENND1C-208ENST00000590444 ABCC8Q09428 1581 aa20.76■□□□□ 0.91
DENND1C-208ENST00000590444 UBTFP17480 764 aaKnown RBP20.75■□□□□ 0.91
DENND1C-208ENST00000590444 SOGA1O94964 1423 aa20.75■□□□□ 0.91
DENND1C-208ENST00000590444 RBM19Q9Y4C8 960 aaKnown RBP20.7■□□□□ 0.91
DENND1C-208ENST00000590444 BAZ1BQ9UIG0 1483 aaKnown RBP20.7■□□□□ 0.9
DENND1C-208ENST00000590444 KCNH8Q96L42 1107 aa20.66■□□□□ 0.9
DENND1C-208ENST00000590444 FKBP8Q14318 412 aa20.65■□□□□ 0.9
DENND1C-208ENST00000590444 PRKCSHP14314 528 aaPredicted RBP20.64■□□□□ 0.89
DENND1C-208ENST00000590444 RUSC2Q8N2Y8 1516 aa20.63■□□□□ 0.89
DENND1C-208ENST00000590444 MSH5O43196 834 aa20.57■□□□□ 0.88
DENND1C-208ENST00000590444 GOLGA3Q08378 1498 aa20.57■□□□□ 0.88
DENND1C-208ENST00000590444 DHX57Q6P158 1386 aaKnown RBP20.56■□□□□ 0.88
DENND1C-208ENST00000590444 EEA1Q15075 1411 aa20.54■□□□□ 0.88
DENND1C-208ENST00000590444 ITGAEP38570 1179 aa20.49■□□□□ 0.87
DENND1C-208ENST00000590444 NCAPD3P42695 1498 aa20.47■□□□□ 0.87
DENND1C-208ENST00000590444 CLIP1P30622 1438 aa20.45■□□□□ 0.86
DENND1C-208ENST00000590444 HMGXB3Q12766 1538 aa20.44■□□□□ 0.86
DENND1C-208ENST00000590444 VPS8Q8N3P4 1428 aa20.43■□□□□ 0.86
DENND1C-208ENST00000590444 APLP2Q06481 763 aa20.42■□□□□ 0.86
DENND1C-208ENST00000590444 NEFLP07196 543 aa20.41■□□□□ 0.86
DENND1C-208ENST00000590444 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
DENND1C-208ENST00000590444 CEP164Q9UPV0 1460 aa20.32■□□□□ 0.84
DENND1C-208ENST00000590444 FANCIQ9NVI1 1328 aa20.32■□□□□ 0.84
DENND1C-208ENST00000590444 CC2D2AQ9P2K1 1620 aa20.32■□□□□ 0.84
DENND1C-208ENST00000590444 ERICH6Q7L0X2 663 aa20.29■□□□□ 0.84
DENND1C-208ENST00000590444 TRIM52Q96A61 297 aa20.28■□□□□ 0.84
DENND1C-208ENST00000590444 RANGAP1P46060 587 aaPredicted RBP20.27■□□□□ 0.84
DENND1C-208ENST00000590444 DDX10Q13206 875 aaKnown RBP20.27■□□□□ 0.84
DENND1C-208ENST00000590444 KIF21BO75037 1637 aa20.26■□□□□ 0.83
DENND1C-208ENST00000590444 DNAJC5BQ9UF47 199 aa20.25■□□□□ 0.83
DENND1C-208ENST00000590444 DEKP35659 375 aaKnown RBP20.21■□□□□ 0.83
DENND1C-208ENST00000590444 CFTRP13569 1480 aa20.16■□□□□ 0.82
DENND1C-208ENST00000590444 MYT1LQ9UL68 1186 aa20.16■□□□□ 0.82
DENND1C-208ENST00000590444 KANK4Q5T7N3 995 aaPredicted RBP20.15■□□□□ 0.82
DENND1C-208ENST00000590444 CDK11AQ9UQ88 783 aaPredicted RBP20.15■□□□□ 0.82
DENND1C-208ENST00000590444 RAPGEF2Q9Y4G8 1499 aa20.15■□□□□ 0.82
DENND1C-208ENST00000590444 PPP1R15AO75807 674 aaPredicted RBP20.14■□□□□ 0.82
DENND1C-208ENST00000590444 TOP2BQ02880 1626 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms