RNA–Protein interactions for RNA: ENST00000590104.1

LAMA3-211, Transcript of laminin subunit alpha 3, humanhuman

TSL 5

Gene LAMA3, Length 462 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-211ENST00000590104 AEBP2Q6ZN18 517 aaPredicted RBP25.28■■□□□ 1.64
LAMA3-211ENST00000590104 CHIC1Q5VXU3 224 aa23.97■■□□□ 1.43
LAMA3-211ENST00000590104 SENP3Q9H4L4 574 aaPredicted RBP21.61■■□□□ 1.05
LAMA3-211ENST00000590104 PHF23Q9BUL5 403 aaPredicted RBP21.32■■□□□ 1
LAMA3-211ENST00000590104 FOXD1Q16676 465 aa20.13■□□□□ 0.81
LAMA3-211ENST00000590104 PLPPR3Q6T4P5 718 aa19.15■□□□□ 0.66
LAMA3-211ENST00000590104 MSH5O43196 834 aa18.88■□□□□ 0.61
LAMA3-211ENST00000590104 PIAS4Q8N2W9 510 aaPredicted RBP18.83■□□□□ 0.6
LAMA3-211ENST00000590104 PPP6R1Q9UPN7 881 aa18.77■□□□□ 0.6
LAMA3-211ENST00000590104 ADRA2BP18089 450 aa18.72■□□□□ 0.59
LAMA3-211ENST00000590104 POTEDQ86YR6 584 aa18.51■□□□□ 0.55
LAMA3-211ENST00000590104 MAPK8IP2Q13387 824 aaPredicted RBP17.21■□□□□ 0.35
LAMA3-211ENST00000590104 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
LAMA3-211ENST00000590104 DMRT2Q9Y5R5 561 aa17.11■□□□□ 0.33
LAMA3-211ENST00000590104 PPP4R3CPQ6ZMV5 832 aa16.77■□□□□ 0.28
LAMA3-211ENST00000590104 DCAF8L1A6NGE4 600 aa16.48■□□□□ 0.23
LAMA3-211ENST00000590104 CNKSR2Q8WXI2 1034 aa16.47■□□□□ 0.23
LAMA3-211ENST00000590104 HOXD11P31277 338 aaPredicted RBP16.45■□□□□ 0.22
LAMA3-211ENST00000590104 RNF216Q9NWF9 866 aaPredicted RBP16.33■□□□□ 0.2
LAMA3-211ENST00000590104 CACNB1Q02641 598 aaPredicted RBP16.26■□□□□ 0.19
LAMA3-211ENST00000590104 NCBP3Q53F19 620 aaKnown RBP16.13■□□□□ 0.17
LAMA3-211ENST00000590104 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
LAMA3-211ENST00000590104 DNAJC5BQ9UF47 199 aa15.88■□□□□ 0.13
LAMA3-211ENST00000590104 C1QBPQ07021 282 aaKnown RBP15.87■□□□□ 0.13
LAMA3-211ENST00000590104 NISCHQ9Y2I1 1504 aa15.87■□□□□ 0.13
LAMA3-211ENST00000590104 NPM3O75607 178 aaKnown RBP15.86■□□□□ 0.13
LAMA3-211ENST00000590104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.73■□□□□ 0.11
LAMA3-211ENST00000590104 KCNA4P22459 653 aa15.52■□□□□ 0.08
LAMA3-211ENST00000590104 ABCC9O60706 1549 aa15.46■□□□□ 0.07
LAMA3-211ENST00000590104 U3KPZ7 1027 aaPredicted RBP15.34■□□□□ 0.05
LAMA3-211ENST00000590104 CAPN15O75808 1086 aa15.17■□□□□ 0.02
LAMA3-211ENST00000590104 SLC4A2P04920 1241 aa15.15■□□□□ 0.02
LAMA3-211ENST00000590104 SPINK5Q9NQ38 1064 aaPredicted RBP15.15■□□□□ 0.02
LAMA3-211ENST00000590104 DSG3P32926 999 aa15.05■□□□□ -0
LAMA3-211ENST00000590104 APLP2Q06481 763 aa14.96□□□□□ -0.01
LAMA3-211ENST00000590104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.93□□□□□ -0.02
LAMA3-211ENST00000590104 HNRNPUL2Q1KMD3 747 aaKnown RBP14.93□□□□□ -0.02
LAMA3-211ENST00000590104 TRHP20396 242 aaPredicted RBP14.91□□□□□ -0.02
LAMA3-211ENST00000590104 ZNF219Q9P2Y4 722 aaPredicted RBP14.87□□□□□ -0.03
LAMA3-211ENST00000590104 SAMD1Q6SPF0 538 aaPredicted RBP14.84□□□□□ -0.03
LAMA3-211ENST00000590104 ABCB7O75027 752 aa14.8□□□□□ -0.04
LAMA3-211ENST00000590104 DNAJC5Q9H3Z4 198 aa14.79□□□□□ -0.04
LAMA3-211ENST00000590104 MYCNP04198 464 aaPredicted RBP14.69□□□□□ -0.06
LAMA3-211ENST00000590104 SLC4A1APQ9BWU0 796 aaKnown RBP14.66□□□□□ -0.06
LAMA3-211ENST00000590104 POTEHQ6S545 545 aa14.52□□□□□ -0.09
LAMA3-211ENST00000590104 FOXD4L1Q9NU39 408 aa14.51□□□□□ -0.09
LAMA3-211ENST00000590104 POLA2Q14181 598 aa14.48□□□□□ -0.09
LAMA3-211ENST00000590104 RBM42Q9BTD8 480 aaKnown RBP14.4□□□□□ -0.1
LAMA3-211ENST00000590104 CCDC180Q9P1Z9 1646 aa14.38□□□□□ -0.11
LAMA3-211ENST00000590104 ATF5Q9Y2D1 282 aaPredicted RBP14.33□□□□□ -0.12
LAMA3-211ENST00000590104 PABPN1Q86U42 306 aaKnown RBP eCLIP14.28□□□□□ -0.12
LAMA3-211ENST00000590104 ZBTB22O15209 634 aa14.24□□□□□ -0.13
LAMA3-211ENST00000590104 RB1CC1Q8TDY2 1594 aa14.19□□□□□ -0.14
LAMA3-211ENST00000590104 ZBTB12Q9Y330 459 aaPredicted RBP14.19□□□□□ -0.14
LAMA3-211ENST00000590104 CHRDL2Q6WN34 429 aa14.09□□□□□ -0.15
LAMA3-211ENST00000590104 ATXN8OSP0DMR3 200 aa14.05□□□□□ -0.16
LAMA3-211ENST00000590104 AKT1S1Q96B36 256 aa14.03□□□□□ -0.16
LAMA3-211ENST00000590104 OSCARQ8IYS5 282 aa14.02□□□□□ -0.17
LAMA3-211ENST00000590104 CECR2Q9BXF3 1484 aa13.99□□□□□ -0.17
LAMA3-211ENST00000590104 UNC13AQ9UPW8 1703 aa13.95□□□□□ -0.18
LAMA3-211ENST00000590104 REM2Q8IYK8 340 aaPredicted RBP13.9□□□□□ -0.18
LAMA3-211ENST00000590104 CC2D2AQ9P2K1 1620 aa13.88□□□□□ -0.19
LAMA3-211ENST00000590104 TRIM41Q8WV44 630 aa13.86□□□□□ -0.19
LAMA3-211ENST00000590104 BICRAQ9NZM4 1560 aa13.83□□□□□ -0.19
LAMA3-211ENST00000590104 FBLN2P98095 1184 aa13.83□□□□□ -0.2
LAMA3-211ENST00000590104 NACADO15069 1562 aa13.83□□□□□ -0.2
LAMA3-211ENST00000590104 DCAF8L2P0C7V8 631 aa13.78□□□□□ -0.2
LAMA3-211ENST00000590104 PITPNM1O00562 1244 aa13.75□□□□□ -0.21
LAMA3-211ENST00000590104 SPDYE2BA6NHP3 402 aa13.74□□□□□ -0.21
LAMA3-211ENST00000590104 SPDYE6P0CI01 402 aa13.74□□□□□ -0.21
LAMA3-211ENST00000590104 SPDYE2Q495Y8 402 aa13.74□□□□□ -0.21
LAMA3-211ENST00000590104 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
LAMA3-211ENST00000590104 MKRN4PQ13434 485 aaPredicted RBP13.66□□□□□ -0.22
LAMA3-211ENST00000590104 FXR2P51116 673 aaKnown RBP eCLIP13.63□□□□□ -0.23
LAMA3-211ENST00000590104 CUX2O14529 1486 aa13.61□□□□□ -0.23
LAMA3-211ENST00000590104 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
LAMA3-211ENST00000590104 SP7Q8TDD2 431 aaPredicted RBP13.58□□□□□ -0.24
LAMA3-211ENST00000590104 EIF4G1Q04637 1599 aaKnown RBP13.58□□□□□ -0.24
LAMA3-211ENST00000590104 CSRNP3Q8WYN3 585 aa13.55□□□□□ -0.24
LAMA3-211ENST00000590104 HAX1O00165 279 aa13.53□□□□□ -0.24
LAMA3-211ENST00000590104 CLEC11AQ9Y240 323 aa13.53□□□□□ -0.24
LAMA3-211ENST00000590104 SPDYE1Q8NFV5 336 aaPredicted RBP13.52□□□□□ -0.25
LAMA3-211ENST00000590104 SSUH2Q9Y2M2 353 aa13.52□□□□□ -0.25
LAMA3-211ENST00000590104 PRKAR2AP13861 404 aaKnown RBP13.41□□□□□ -0.26
LAMA3-211ENST00000590104 SHROOM4Q9ULL8 1493 aa13.41□□□□□ -0.26
LAMA3-211ENST00000590104 ERCC6Q03468 1493 aa13.4□□□□□ -0.26
LAMA3-211ENST00000590104 EHMT2Q96KQ7 1210 aa13.38□□□□□ -0.27
LAMA3-211ENST00000590104 MYO15BQ96JP2 1530 aa13.38□□□□□ -0.27
LAMA3-211ENST00000590104 EVX2Q03828 476 aa13.31□□□□□ -0.28
LAMA3-211ENST00000590104 PRR29P0C7W0 189 aa13.29□□□□□ -0.28
LAMA3-211ENST00000590104 CHADLQ6NUI6 762 aa13.24□□□□□ -0.29
LAMA3-211ENST00000590104 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
LAMA3-211ENST00000590104 DCAF1Q9Y4B6 1507 aa13.18□□□□□ -0.3
LAMA3-211ENST00000590104 SCRIBQ14160 1630 aa13.16□□□□□ -0.3
LAMA3-211ENST00000590104 ZCCHC6Q5VYS8 1495 aaKnown RBP13.13□□□□□ -0.31
LAMA3-211ENST00000590104 SPDYE4A6NLX3 237 aa13.04□□□□□ -0.32
LAMA3-211ENST00000590104 FARP1Q9Y4F1 1045 aaPredicted RBP13.04□□□□□ -0.32
LAMA3-211ENST00000590104 GABBR2O75899 941 aa13.02□□□□□ -0.33
LAMA3-211ENST00000590104 NESP48681 1621 aa13.01□□□□□ -0.33
LAMA3-211ENST00000590104 STAG3Q9UJ98 1225 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms